RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.59
SHMT1P1-201ENST00000419974 E9PSI1 815 aa18.71■□□□□ 0.59
SHMT1P1-201ENST00000419974 RIPK4P57078 832 aa18.71■□□□□ 0.59
SHMT1P1-201ENST00000419974 CHRNA2Q15822 529 aa18.71■□□□□ 0.59
SHMT1P1-201ENST00000419974 AMOTQ4VCS5 1084 aa18.71■□□□□ 0.59
SHMT1P1-201ENST00000419974 GLI3P10071 1580 aa18.7■□□□□ 0.58
SHMT1P1-201ENST00000419974 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
SHMT1P1-201ENST00000419974 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
SHMT1P1-201ENST00000419974 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
SHMT1P1-201ENST00000419974 CALD1Q05682 793 aaKnown RBP18.69■□□□□ 0.58
SHMT1P1-201ENST00000419974 CCDC125Q86Z20 511 aa18.69■□□□□ 0.58
SHMT1P1-201ENST00000419974 CARD10Q9BWT7 1032 aa18.69■□□□□ 0.58
SHMT1P1-201ENST00000419974 BTG4Q9NY30 223 aa18.69■□□□□ 0.58
SHMT1P1-201ENST00000419974 ZBTB7CA1YPR0 619 aa18.68■□□□□ 0.58
SHMT1P1-201ENST00000419974 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
SHMT1P1-201ENST00000419974 MTHFSDQ2M296 383 aaKnown RBP18.67■□□□□ 0.58
SHMT1P1-201ENST00000419974 EP400Q96L91 3159 aa18.66■□□□□ 0.58
SHMT1P1-201ENST00000419974 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
SHMT1P1-201ENST00000419974 CRB1P82279 1406 aa18.66■□□□□ 0.58
SHMT1P1-201ENST00000419974 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
SHMT1P1-201ENST00000419974 NRAPQ86VF7 1730 aa18.65■□□□□ 0.58
SHMT1P1-201ENST00000419974 SEPT12Q8IYM1 358 aa18.65■□□□□ 0.58
SHMT1P1-201ENST00000419974 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
SHMT1P1-201ENST00000419974 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
SHMT1P1-201ENST00000419974 CSB-PGBD3P0DP91 1061 aa18.64■□□□□ 0.57
SHMT1P1-201ENST00000419974 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
SHMT1P1-201ENST00000419974 CCDC9Q9Y3X0 531 aaKnown RBP18.64■□□□□ 0.57
SHMT1P1-201ENST00000419974 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
SHMT1P1-201ENST00000419974 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
SHMT1P1-201ENST00000419974 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SHMT1P1-201ENST00000419974 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 SPATA31A5Q5VU36 1347 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 SPATA31A7Q8IWB4 1347 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 EVA1CP58658 441 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 MYH16Q9H6N6 1097 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
SHMT1P1-201ENST00000419974 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 TOM1L2Q6ZVM7 507 aa18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 IFT57Q9NWB7 429 aa18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 THRAP3Q9Y2W1 955 aaKnown RBP18.61■□□□□ 0.57
SHMT1P1-201ENST00000419974 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 MAP3K5Q99683 1374 aa18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 CT47B1P0C2W7 299 aaPredicted RBP18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 LARP1Q6PKG0 1096 aaKnown RBP18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
SHMT1P1-201ENST00000419974 CFAP44Q96MT7 982 aa18.59■□□□□ 0.57
SHMT1P1-201ENST00000419974 SPG7Q9UQ90 795 aa18.59■□□□□ 0.57
SHMT1P1-201ENST00000419974 MEGF6O75095 1541 aa18.58■□□□□ 0.57
SHMT1P1-201ENST00000419974 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.57
SHMT1P1-201ENST00000419974 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.57
SHMT1P1-201ENST00000419974 RTF1Q92541 710 aaKnown RBP18.58■□□□□ 0.57
SHMT1P1-201ENST00000419974 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.57
SHMT1P1-201ENST00000419974 GNAI1P63096 354 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 FAM98CQ17RN3 349 aaKnown RBP18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 SPATA31A1Q5TZJ5 1347 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 RNF123Q5XPI4 1314 aa18.57■□□□□ 0.56
SHMT1P1-201ENST00000419974 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
SHMT1P1-201ENST00000419974 IL2RBP14784 551 aa18.56■□□□□ 0.56
SHMT1P1-201ENST00000419974 LRRC37A3O60309 1634 aa18.56■□□□□ 0.56
SHMT1P1-201ENST00000419974 PARP4Q9UKK3 1724 aaKnown RBP18.56■□□□□ 0.56
SHMT1P1-201ENST00000419974 CHL1O00533 1208 aa18.55■□□□□ 0.56
SHMT1P1-201ENST00000419974 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 IL17REQ8NFR9 667 aa18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 ZNF428Q96B54 188 aa18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
SHMT1P1-201ENST00000419974 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SHMT1P1-201ENST00000419974 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
SHMT1P1-201ENST00000419974 IFNL2Q8IZJ0 200 aa18.53■□□□□ 0.56
SHMT1P1-201ENST00000419974 FANCIQ9NVI1 1328 aa18.53■□□□□ 0.56
SHMT1P1-201ENST00000419974 PHKG2P15735 406 aa18.52■□□□□ 0.56
SHMT1P1-201ENST00000419974 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
SHMT1P1-201ENST00000419974 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
SHMT1P1-201ENST00000419974 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.55
SHMT1P1-201ENST00000419974 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
SHMT1P1-201ENST00000419974 A0A0G2JS52 829 aa18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 MYT1Q01538 1121 aa18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 MCM10Q7L590 875 aa18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 DCAF5Q96JK2 942 aa18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 SOS1Q07889 1333 aaPredicted RBP18.5■□□□□ 0.55
SHMT1P1-201ENST00000419974 CYP27B1O15528 508 aa18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 DCTN1Q14203 1278 aa18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
SHMT1P1-201ENST00000419974 MRC1P22897 1456 aa18.48■□□□□ 0.55
SHMT1P1-201ENST00000419974 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms