RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 XBP1P17861 261 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 PSMA5P28066 241 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 AMER1Q5JTC6 1135 aaPredicted RBP10.2□□□□□ -0.78
UBR4-206ENST00000419533 LNPKQ9C0E8 428 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 ZNF772Q68DY9 489 aaPredicted RBP10.2□□□□□ -0.78
UBR4-206ENST00000419533 TET3O43151 1660 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 CCDC158Q5M9N0 1113 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 SAMD1Q6SPF0 538 aaPredicted RBP10.19□□□□□ -0.78
UBR4-206ENST00000419533 PPP1R1BQ9UD71 204 aaPredicted RBP10.19□□□□□ -0.78
UBR4-206ENST00000419533 SMC3Q9UQE7 1217 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 DDX49Q9Y6V7 483 aaKnown RBP10.19□□□□□ -0.78
UBR4-206ENST00000419533 CFAP65Q6ZU64 1925 aaKnown RBP10.19□□□□□ -0.78
UBR4-206ENST00000419533 CDC45O75419 566 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 GCC2Q8IWJ2 1684 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 GNAI2P04899 355 aa10.19□□□□□ -0.78
UBR4-206ENST00000419533 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
UBR4-206ENST00000419533 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
UBR4-206ENST00000419533 CCT4P50991 539 aaKnown RBP10.18□□□□□ -0.78
UBR4-206ENST00000419533 PDE4CQ08493 712 aa10.18□□□□□ -0.78
UBR4-206ENST00000419533 PANK1Q8TE04 598 aa10.18□□□□□ -0.78
UBR4-206ENST00000419533 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
UBR4-206ENST00000419533 TTC39AQ5SRH9 613 aa10.18□□□□□ -0.78
UBR4-206ENST00000419533 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
UBR4-206ENST00000419533 INO80Q9ULG1 1556 aaPredicted RBP10.18□□□□□ -0.78
UBR4-206ENST00000419533 CT47B1P0C2W7 299 aaPredicted RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 IKQ13123 557 aaPredicted RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 GSE1Q14687 1217 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 ABCC11Q96J66 1382 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 DNAJC2Q99543 621 aaKnown RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.17□□□□□ -0.786e-11■■■■□ 22
UBR4-206ENST00000419533 ABCA6Q8N139 1617 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 FOXD4L6Q3SYB3 417 aaPredicted RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 FOXD4L3Q6VB84 417 aaPredicted RBP10.17□□□□□ -0.78
UBR4-206ENST00000419533 BICD2Q8TD16 824 aa10.17□□□□□ -0.78
UBR4-206ENST00000419533 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
UBR4-206ENST00000419533 CDCA7Q9BWT1 371 aaPredicted RBP10.16□□□□□ -0.78
UBR4-206ENST00000419533 SRCIN1Q9C0H9 1055 aa10.16□□□□□ -0.78
UBR4-206ENST00000419533 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
UBR4-206ENST00000419533 BTBD11A6QL63 1104 aa10.16□□□□□ -0.78
UBR4-206ENST00000419533 WDR63Q8IWG1 891 aa10.16□□□□□ -0.78
UBR4-206ENST00000419533 GOLGA6L1Q8N7Z2 621 aa10.16□□□□□ -0.78
UBR4-206ENST00000419533 VPS37CA5D8V6 355 aaPredicted RBP10.16□□□□□ -0.78
UBR4-206ENST00000419533 ZC3H13Q5T200 1668 aaKnown RBP10.16□□□□□ -0.78
UBR4-206ENST00000419533 CCAR1Q8IX12 1150 aaKnown RBP10.15□□□□□ -0.78
UBR4-206ENST00000419533 MPHOSPH8Q99549 860 aa10.15□□□□□ -0.78
UBR4-206ENST00000419533 PRAG1Q86YV5 1406 aa10.15□□□□□ -0.78
UBR4-206ENST00000419533 FCHSD2O94868 740 aa10.15□□□□□ -0.78
UBR4-206ENST00000419533 IPO7O95373 1038 aaKnown RBP10.15□□□□□ -0.78
UBR4-206ENST00000419533 GCC1Q96CN9 775 aa10.15□□□□□ -0.78
UBR4-206ENST00000419533 FER1L4A9Z1Z3 1794 aa10.15□□□□□ -0.79
UBR4-206ENST00000419533 STARD3NLO95772 234 aa10.15□□□□□ -0.79
UBR4-206ENST00000419533 RRS1Q15050 365 aaKnown RBP10.15□□□□□ -0.79
UBR4-206ENST00000419533 NSD3Q9BZ95 1437 aa10.15□□□□□ -0.79
UBR4-206ENST00000419533 NUCB2P80303 420 aa10.15□□□□□ -0.79
UBR4-206ENST00000419533 CCDC57Q2TAC2 916 aa10.15□□□□□ -0.79
UBR4-206ENST00000419533 NSD2O96028 1365 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 AMOTQ4VCS5 1084 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 USP21Q9UK80 565 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 TTC21BQ7Z4L5 1316 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 MYL6BP14649 208 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 ADGRB3O60242 1522 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 HSP90AA2PQ14568 343 aaPredicted RBP10.14□□□□□ -0.79
UBR4-206ENST00000419533 CCDC73Q6ZRK6 1079 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 NACAP1Q9BZK3 213 aa10.14□□□□□ -0.79
UBR4-206ENST00000419533 KIF1BO60333 1816 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 GNAT3A8MTJ3 354 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 ZSCAN25Q6NSZ9 544 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 NOB1Q9ULX3 412 aaKnown RBP10.13□□□□□ -0.79
UBR4-206ENST00000419533 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
UBR4-206ENST00000419533 NBPF14Q5TI25 921 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 NME9Q86XW9 330 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 R3HCC1Q9Y3T6 440 aaKnown RBP10.13□□□□□ -0.79
UBR4-206ENST00000419533 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 MADDQ8WXG6 1647 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
UBR4-206ENST00000419533 PDE3AQ14432 1141 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 LMTK2Q8IWU2 1503 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 PTPRTO14522 1441 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 C22orf23Q9BZE7 217 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 CHMP5Q9NZZ3 219 aa10.13□□□□□ -0.79
UBR4-206ENST00000419533 ORAI2Q96SN7 254 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 ZNF652Q9Y2D9 606 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 CHRNA2Q15822 529 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
UBR4-206ENST00000419533 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 IQGAP3Q86VI3 1631 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 RALGAPBQ86X10 1494 aa10.12□□□□□ -0.79
UBR4-206ENST00000419533 TRPC5Q9UL62 973 aaPredicted RBP10.12□□□□□ -0.79
UBR4-206ENST00000419533 CROCC2H7BZ55 1655 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 FOSBP53539 338 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 DDB1Q16531 1140 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
UBR4-206ENST00000419533 PIK3C2GO75747 1445 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms