RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 BCL9O00512 1426 aa13.19□□□□□ -0.3
CTSA-205ENST00000419493 NSD2O96028 1365 aa13.19□□□□□ -0.3
CTSA-205ENST00000419493 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
CTSA-205ENST00000419493 EYA1Q99502 592 aa13.17□□□□□ -0.3
CTSA-205ENST00000419493 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
CTSA-205ENST00000419493 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
CTSA-205ENST00000419493 MEGF6O75095 1541 aa13.16□□□□□ -0.3
CTSA-205ENST00000419493 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
CTSA-205ENST00000419493 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
CTSA-205ENST00000419493 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
CTSA-205ENST00000419493 ANKRD26Q9UPS8 1709 aa13.14□□□□□ -0.31
CTSA-205ENST00000419493 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
CTSA-205ENST00000419493 PROM2Q8N271 834 aa13.14□□□□□ -0.31
CTSA-205ENST00000419493 SPG7Q9UQ90 795 aa13.14□□□□□ -0.31
CTSA-205ENST00000419493 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
CTSA-205ENST00000419493 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
CTSA-205ENST00000419493 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
CTSA-205ENST00000419493 RREB1Q92766 1687 aa13.12□□□□□ -0.31
CTSA-205ENST00000419493 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
CTSA-205ENST00000419493 MTHFSP49914 203 aa13.11□□□□□ -0.31
CTSA-205ENST00000419493 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CTSA-205ENST00000419493 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
CTSA-205ENST00000419493 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
CTSA-205ENST00000419493 SLC15A2Q16348 729 aa13.09□□□□□ -0.31
CTSA-205ENST00000419493 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
CTSA-205ENST00000419493 BTAF1O14981 1849 aa13.09□□□□□ -0.31
CTSA-205ENST00000419493 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.32
CTSA-205ENST00000419493 RGPD4Q7Z3J3 1758 aa13.08□□□□□ -0.32
CTSA-205ENST00000419493 KCNQ4P56696 695 aa13.08□□□□□ -0.32
CTSA-205ENST00000419493 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
CTSA-205ENST00000419493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
CTSA-205ENST00000419493 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.32
CTSA-205ENST00000419493 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 SPON1Q9HCB6 807 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 DOT1LQ8TEK3 1739 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 SHANK3Q9BYB0 1731 aa13.07□□□□□ -0.32
CTSA-205ENST00000419493 PHKG2P15735 406 aa13.06□□□□□ -0.32
CTSA-205ENST00000419493 IL13P35225 146 aa13.06□□□□□ -0.32
CTSA-205ENST00000419493 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
CTSA-205ENST00000419493 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
CTSA-205ENST00000419493 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
CTSA-205ENST00000419493 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
CTSA-205ENST00000419493 AMOTQ4VCS5 1084 aa13.05□□□□□ -0.32
CTSA-205ENST00000419493 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
CTSA-205ENST00000419493 TMOD3Q9NYL9 352 aa13.05□□□□□ -0.32
CTSA-205ENST00000419493 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
CTSA-205ENST00000419493 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
CTSA-205ENST00000419493 HMOX1P09601 288 aa13.04□□□□□ -0.32
CTSA-205ENST00000419493 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
CTSA-205ENST00000419493 C1orf141Q5JVX7 400 aa13.04□□□□□ -0.32
CTSA-205ENST00000419493 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
CTSA-205ENST00000419493 PDGFDQ9GZP0 370 aaPredicted RBP13.04□□□□□ -0.32
CTSA-205ENST00000419493 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
CTSA-205ENST00000419493 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
CTSA-205ENST00000419493 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
CTSA-205ENST00000419493 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
CTSA-205ENST00000419493 PIGBQ92521 554 aa13.03□□□□□ -0.32
CTSA-205ENST00000419493 SMARCC1Q92922 1105 aaPredicted RBP13.03□□□□□ -0.32
CTSA-205ENST00000419493 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
CTSA-205ENST00000419493 MSH5O43196 834 aa13.02□□□□□ -0.33
CTSA-205ENST00000419493 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
CTSA-205ENST00000419493 ZNF827Q17R98 1081 aa13.02□□□□□ -0.33
CTSA-205ENST00000419493 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
CTSA-205ENST00000419493 PALLDQ8WX93 1383 aa13.02□□□□□ -0.33
CTSA-205ENST00000419493 LRP5O75197 1615 aa13.02□□□□□ -0.33
CTSA-205ENST00000419493 CABP4P57796 275 aa13.01□□□□□ -0.33
CTSA-205ENST00000419493 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
CTSA-205ENST00000419493 AKT1S1Q96B36 256 aa13□□□□□ -0.33
CTSA-205ENST00000419493 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
CTSA-205ENST00000419493 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
CTSA-205ENST00000419493 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
CTSA-205ENST00000419493 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
CTSA-205ENST00000419493 ITGB4P16144 1822 aa12.98□□□□□ -0.33
CTSA-205ENST00000419493 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
CTSA-205ENST00000419493 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CTSA-205ENST00000419493 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
CTSA-205ENST00000419493 KDRP35968 1356 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 LY75O60449 1722 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 LOC102724428A0A0B4J2F2 783 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 SIK1P57059 783 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
CTSA-205ENST00000419493 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 PNPLA7Q6ZV29 1317 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
CTSA-205ENST00000419493 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 AK7Q96M32 723 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
CTSA-205ENST00000419493 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
CTSA-205ENST00000419493 DCAF8L1A6NGE4 600 aa12.95□□□□□ -0.34
CTSA-205ENST00000419493 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
CTSA-205ENST00000419493 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 PHF14O94880 888 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
CTSA-205ENST00000419493 POLD1P28340 1107 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 PTGER2P43116 358 aa12.94□□□□□ -0.34
CTSA-205ENST00000419493 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms