RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 QRICH2Q9H0J4 1663 aa17.05■□□□□ 0.32
DDX39B-205ENST00000419020 NSD2O96028 1365 aa17.04■□□□□ 0.32
DDX39B-205ENST00000419020 PRIM1P49642 420 aaKnown RBP17.04■□□□□ 0.32
DDX39B-205ENST00000419020 DDX54Q8TDD1 881 aaKnown RBP17.04■□□□□ 0.32
DDX39B-205ENST00000419020 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
DDX39B-205ENST00000419020 ANKRD36BQ8N2N9 1353 aa17.02■□□□□ 0.32
DDX39B-205ENST00000419020 TTC21BQ7Z4L5 1316 aa17.01■□□□□ 0.31
DDX39B-205ENST00000419020 HSPA1AP0DMV8 641 aaKnown RBP17.01■□□□□ 0.31
DDX39B-205ENST00000419020 HSPA1BP0DMV9 641 aaKnown RBP17.01■□□□□ 0.31
DDX39B-205ENST00000419020 FSTL1Q12841 308 aa17.01■□□□□ 0.31
DDX39B-205ENST00000419020 PCDH10Q9P2E7 1040 aa17.01■□□□□ 0.31
DDX39B-205ENST00000419020 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
DDX39B-205ENST00000419020 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
DDX39B-205ENST00000419020 FLAD1Q8NFF5 587 aa16.98■□□□□ 0.31
DDX39B-205ENST00000419020 ANKRD24Q8TF21 1146 aa16.97■□□□□ 0.31
DDX39B-205ENST00000419020 C5P01031 1676 aa16.97■□□□□ 0.31
DDX39B-205ENST00000419020 USP54Q70EL1 1684 aa16.97■□□□□ 0.31
DDX39B-205ENST00000419020 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
DDX39B-205ENST00000419020 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.3
DDX39B-205ENST00000419020 USP47Q96K76 1375 aa16.95■□□□□ 0.3
DDX39B-205ENST00000419020 AMIGO3Q86WK7 504 aa16.94■□□□□ 0.3
DDX39B-205ENST00000419020 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
DDX39B-205ENST00000419020 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
DDX39B-205ENST00000419020 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
DDX39B-205ENST00000419020 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
DDX39B-205ENST00000419020 LTN1O94822 1766 aa16.92■□□□□ 0.3
DDX39B-205ENST00000419020 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
DDX39B-205ENST00000419020 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
DDX39B-205ENST00000419020 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
DDX39B-205ENST00000419020 BCS1LQ9Y276 419 aa16.91■□□□□ 0.3
DDX39B-205ENST00000419020 TAF1LQ8IZX4 1826 aa16.91■□□□□ 0.3
DDX39B-205ENST00000419020 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
DDX39B-205ENST00000419020 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
DDX39B-205ENST00000419020 C9orf131Q5VYM1 1079 aa16.89■□□□□ 0.29
DDX39B-205ENST00000419020 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.29
DDX39B-205ENST00000419020 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 PHF14O94880 888 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 USP31Q70CQ4 1352 aa16.88■□□□□ 0.29
DDX39B-205ENST00000419020 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
DDX39B-205ENST00000419020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
DDX39B-205ENST00000419020 AK7Q96M32 723 aa16.87■□□□□ 0.29
DDX39B-205ENST00000419020 KDM2BQ8NHM5 1336 aa16.87■□□□□ 0.29
DDX39B-205ENST00000419020 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
DDX39B-205ENST00000419020 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
DDX39B-205ENST00000419020 A0A0G2JLW4 131 aa16.86■□□□□ 0.29
DDX39B-205ENST00000419020 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
DDX39B-205ENST00000419020 KIF13BQ9NQT8 1826 aa16.86■□□□□ 0.29
DDX39B-205ENST00000419020 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
DDX39B-205ENST00000419020 TGFB2P61812 414 aa16.85■□□□□ 0.29
DDX39B-205ENST00000419020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDX39B-205ENST00000419020 PALLDQ8WX93 1383 aa16.85■□□□□ 0.29
DDX39B-205ENST00000419020 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
DDX39B-205ENST00000419020 FAM161AQ3B820 660 aa16.84■□□□□ 0.29
DDX39B-205ENST00000419020 LTV1Q96GA3 475 aaPredicted RBP16.84■□□□□ 0.29
DDX39B-205ENST00000419020 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
DDX39B-205ENST00000419020 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
DDX39B-205ENST00000419020 MEGF6O75095 1541 aa16.83■□□□□ 0.28
DDX39B-205ENST00000419020 FCHSD2O94868 740 aa16.83■□□□□ 0.28
DDX39B-205ENST00000419020 NME9Q86XW9 330 aa16.83■□□□□ 0.28
DDX39B-205ENST00000419020 FAM208AQ9UK61 1670 aaKnown RBP16.83■□□□□ 0.28
DDX39B-205ENST00000419020 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
DDX39B-205ENST00000419020 MMP10P09238 476 aa16.82■□□□□ 0.28
DDX39B-205ENST00000419020 SSFA2P28290 1259 aa16.82■□□□□ 0.28
DDX39B-205ENST00000419020 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
DDX39B-205ENST00000419020 IP6K1Q92551 441 aa16.81■□□□□ 0.28
DDX39B-205ENST00000419020 DPEP1P16444 411 aa16.8■□□□□ 0.28
DDX39B-205ENST00000419020 RNF181Q9P0P0 153 aa16.8■□□□□ 0.28
DDX39B-205ENST00000419020 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
DDX39B-205ENST00000419020 FOXN1O15353 648 aa16.78■□□□□ 0.28
DDX39B-205ENST00000419020 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
DDX39B-205ENST00000419020 SBNO2Q9Y2G9 1366 aa16.77■□□□□ 0.28
DDX39B-205ENST00000419020 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
DDX39B-205ENST00000419020 ARFGEF1Q9Y6D6 1849 aa16.77■□□□□ 0.27
DDX39B-205ENST00000419020 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
DDX39B-205ENST00000419020 KCNA3P22001 575 aa16.76■□□□□ 0.27
DDX39B-205ENST00000419020 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
DDX39B-205ENST00000419020 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
DDX39B-205ENST00000419020 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
DDX39B-205ENST00000419020 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
DDX39B-205ENST00000419020 GNPATO15228 680 aa16.73■□□□□ 0.27
DDX39B-205ENST00000419020 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
DDX39B-205ENST00000419020 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
DDX39B-205ENST00000419020 SBF1O95248 1867 aa16.72■□□□□ 0.27
DDX39B-205ENST00000419020 VEGFAP15692 232 aaPredicted RBP16.72■□□□□ 0.27
DDX39B-205ENST00000419020 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
DDX39B-205ENST00000419020 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
DDX39B-205ENST00000419020 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.27
DDX39B-205ENST00000419020 HOXC9P31274 260 aa16.71■□□□□ 0.27
DDX39B-205ENST00000419020 ABHD8Q96I13 439 aa16.71■□□□□ 0.27
DDX39B-205ENST00000419020 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
DDX39B-205ENST00000419020 ITGB4P16144 1822 aa16.7■□□□□ 0.26
DDX39B-205ENST00000419020 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
DDX39B-205ENST00000419020 SIK1P57059 783 aa16.7■□□□□ 0.26
DDX39B-205ENST00000419020 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
DDX39B-205ENST00000419020 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
DDX39B-205ENST00000419020 CTCFP49711 727 aaPredicted RBP16.69■□□□□ 0.26
DDX39B-205ENST00000419020 TMF1P82094 1093 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms