RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 C5P01031 1676 aa16.48■□□□□ 0.23
SNAP47-204ENST00000418653 RBM46Q8TBY0 533 aaKnown RBP16.48■□□□□ 0.23
SNAP47-204ENST00000418653 ANKRD36BQ8N2N9 1353 aa16.48■□□□□ 0.23
SNAP47-204ENST00000418653 FLAD1Q8NFF5 587 aa16.47■□□□□ 0.23
SNAP47-204ENST00000418653 COL23A1Q86Y22 540 aaPredicted RBP16.46■□□□□ 0.23
SNAP47-204ENST00000418653 LTN1O94822 1766 aa16.46■□□□□ 0.22
SNAP47-204ENST00000418653 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
SNAP47-204ENST00000418653 PCDH10Q9P2E7 1040 aa16.45■□□□□ 0.22
SNAP47-204ENST00000418653 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
SNAP47-204ENST00000418653 NSD2O96028 1365 aa16.44■□□□□ 0.22
SNAP47-204ENST00000418653 TTC21BQ7Z4L5 1316 aa16.44■□□□□ 0.22
SNAP47-204ENST00000418653 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
SNAP47-204ENST00000418653 FSTL1Q12841 308 aa16.44■□□□□ 0.22
SNAP47-204ENST00000418653 MIER1Q8N108 512 aa16.44■□□□□ 0.22
SNAP47-204ENST00000418653 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
SNAP47-204ENST00000418653 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
SNAP47-204ENST00000418653 CABP1Q9NZU7 370 aa16.43■□□□□ 0.22
SNAP47-204ENST00000418653 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
SNAP47-204ENST00000418653 CENPJQ9HC77 1338 aaPredicted RBP16.42■□□□□ 0.22
SNAP47-204ENST00000418653 CABP2Q9NPB3 220 aa16.42■□□□□ 0.22
SNAP47-204ENST00000418653 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
SNAP47-204ENST00000418653 CCNL1Q9UK58 526 aaPredicted RBP16.42■□□□□ 0.22
SNAP47-204ENST00000418653 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
SNAP47-204ENST00000418653 MSH5O43196 834 aa16.42■□□□□ 0.22
SNAP47-204ENST00000418653 KIF13BQ9NQT8 1826 aa16.41■□□□□ 0.22
SNAP47-204ENST00000418653 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
SNAP47-204ENST00000418653 USP31Q70CQ4 1352 aa16.41■□□□□ 0.22
SNAP47-204ENST00000418653 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
SNAP47-204ENST00000418653 MSL1Q68DK7 614 aa16.39■□□□□ 0.22
SNAP47-204ENST00000418653 RAB3GAP2Q9H2M9 1393 aa16.39■□□□□ 0.21
SNAP47-204ENST00000418653 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
SNAP47-204ENST00000418653 WWC3Q9ULE0 1092 aa16.39■□□□□ 0.21
SNAP47-204ENST00000418653 TNRC6CQ9HCJ0 1690 aaKnown RBP16.39■□□□□ 0.21
SNAP47-204ENST00000418653 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
SNAP47-204ENST00000418653 USP47Q96K76 1375 aa16.38■□□□□ 0.21
SNAP47-204ENST00000418653 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
SNAP47-204ENST00000418653 TOGARAM1Q9Y4F4 1720 aa16.38■□□□□ 0.21
SNAP47-204ENST00000418653 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
SNAP47-204ENST00000418653 KCNQ4P56696 695 aa16.36■□□□□ 0.21
SNAP47-204ENST00000418653 C4BP0C0L5 1744 aa16.36■□□□□ 0.21
SNAP47-204ENST00000418653 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
SNAP47-204ENST00000418653 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
SNAP47-204ENST00000418653 ANKRD24Q8TF21 1146 aa16.35■□□□□ 0.21
SNAP47-204ENST00000418653 SOX12O15370 315 aa16.35■□□□□ 0.21
SNAP47-204ENST00000418653 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
SNAP47-204ENST00000418653 NMRK2Q9NPI5 230 aa16.34■□□□□ 0.21
SNAP47-204ENST00000418653 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.21
SNAP47-204ENST00000418653 EVC2Q86UK5 1308 aa16.33■□□□□ 0.21
SNAP47-204ENST00000418653 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.2
SNAP47-204ENST00000418653 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
SNAP47-204ENST00000418653 ARFGEF1Q9Y6D6 1849 aa16.32■□□□□ 0.2
SNAP47-204ENST00000418653 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
SNAP47-204ENST00000418653 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
SNAP47-204ENST00000418653 KTN1Q86UP2 1357 aaKnown RBP16.31■□□□□ 0.2
SNAP47-204ENST00000418653 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
SNAP47-204ENST00000418653 HTRA3P83110 453 aa16.29■□□□□ 0.2
SNAP47-204ENST00000418653 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
SNAP47-204ENST00000418653 TGFB2P61812 414 aa16.28■□□□□ 0.2
SNAP47-204ENST00000418653 SMC1BQ8NDV3 1235 aa16.28■□□□□ 0.2
SNAP47-204ENST00000418653 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
SNAP47-204ENST00000418653 SSFA2P28290 1259 aa16.27■□□□□ 0.2
SNAP47-204ENST00000418653 PALLDQ8WX93 1383 aa16.27■□□□□ 0.19
SNAP47-204ENST00000418653 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.19
SNAP47-204ENST00000418653 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
SNAP47-204ENST00000418653 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
SNAP47-204ENST00000418653 AK7Q96M32 723 aa16.26■□□□□ 0.19
SNAP47-204ENST00000418653 MEGF6O75095 1541 aa16.25■□□□□ 0.19
SNAP47-204ENST00000418653 KCPQ6ZWJ8 1503 aa16.25■□□□□ 0.19
SNAP47-204ENST00000418653 IP6K1Q92551 441 aa16.25■□□□□ 0.19
SNAP47-204ENST00000418653 ZC3H4Q9UPT8 1303 aaKnown RBP16.24■□□□□ 0.19
SNAP47-204ENST00000418653 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
SNAP47-204ENST00000418653 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
SNAP47-204ENST00000418653 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
SNAP47-204ENST00000418653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.22■□□□□ 0.19
SNAP47-204ENST00000418653 BCS1LQ9Y276 419 aa16.22■□□□□ 0.19
SNAP47-204ENST00000418653 ITGB4P16144 1822 aa16.21■□□□□ 0.19
SNAP47-204ENST00000418653 RGPD2P0DJD1 1756 aa16.21■□□□□ 0.19
SNAP47-204ENST00000418653 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
SNAP47-204ENST00000418653 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
SNAP47-204ENST00000418653 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
SNAP47-204ENST00000418653 PCNTO95613 3336 aa16.2■□□□□ 0.18
SNAP47-204ENST00000418653 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
SNAP47-204ENST00000418653 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
SNAP47-204ENST00000418653 SBF1O95248 1867 aa16.2■□□□□ 0.18
SNAP47-204ENST00000418653 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
SNAP47-204ENST00000418653 RTL1A6NKG5 1358 aa16.18■□□□□ 0.18
SNAP47-204ENST00000418653 AMIGO3Q86WK7 504 aa16.18■□□□□ 0.18
SNAP47-204ENST00000418653 NME9Q86XW9 330 aa16.18■□□□□ 0.18
SNAP47-204ENST00000418653 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
SNAP47-204ENST00000418653 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
SNAP47-204ENST00000418653 FCHSD2O94868 740 aa16.16■□□□□ 0.18
SNAP47-204ENST00000418653 MMP10P09238 476 aa16.16■□□□□ 0.18
SNAP47-204ENST00000418653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.16■□□□□ 0.18
SNAP47-204ENST00000418653 PHF14O94880 888 aa16.16■□□□□ 0.18
SNAP47-204ENST00000418653 RRAGCQ9HB90 399 aa16.16■□□□□ 0.18
SNAP47-204ENST00000418653 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
SNAP47-204ENST00000418653 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
SNAP47-204ENST00000418653 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
SNAP47-204ENST00000418653 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
SNAP47-204ENST00000418653 A0A0G2JLW4 131 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms