RNA–Protein interactions for RNA: ENST00000418625.5

COPS6-202, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COPS6, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-202ENST00000418625 LRRC4BQ9NT99 713 aa21.4■■□□□ 1.02
COPS6-202ENST00000418625 SHANK3Q9BYB0 1731 aa21.4■■□□□ 1.02
COPS6-202ENST00000418625 FYB1O15117 783 aa21.39■■□□□ 1.01
COPS6-202ENST00000418625 PRIM1P49642 420 aaKnown RBP21.39■■□□□ 1.01
COPS6-202ENST00000418625 ZNF827Q17R98 1081 aa21.39■■□□□ 1.01
COPS6-202ENST00000418625 ARXQ96QS3 562 aa21.39■■□□□ 1.01
COPS6-202ENST00000418625 LY75O60449 1722 aa21.38■■□□□ 1.01
COPS6-202ENST00000418625 RAPGEF4Q8WZA2 1011 aa21.37■■□□□ 1.01
COPS6-202ENST00000418625 SGIP1Q9BQI5 828 aa21.36■■□□□ 1.01
COPS6-202ENST00000418625 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
COPS6-202ENST00000418625 TUBGCP6Q96RT7 1819 aa21.36■■□□□ 1.01
COPS6-202ENST00000418625 MEGF6O75095 1541 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 CGNL1Q0VF96 1302 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 USHBP1Q8N6Y0 703 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 AKT1S1Q96B36 256 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
COPS6-202ENST00000418625 TATP17735 454 aaPredicted RBP21.34■■□□□ 1.01
COPS6-202ENST00000418625 POLD1P28340 1107 aa21.34■■□□□ 1.01
COPS6-202ENST00000418625 KLHL34Q8N239 644 aa21.33■■□□□ 1.01
COPS6-202ENST00000418625 KCNQ4P56696 695 aa21.32■■□□□ 1
COPS6-202ENST00000418625 CCNL1Q9UK58 526 aaPredicted RBP21.32■■□□□ 1
COPS6-202ENST00000418625 INSRP06213 1382 aa21.31■■□□□ 1
COPS6-202ENST00000418625 FLT4P35916 1363 aa21.31■■□□□ 1
COPS6-202ENST00000418625 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
COPS6-202ENST00000418625 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
COPS6-202ENST00000418625 MAP2P11137 1827 aaKnown RBP21.29■■□□□ 1
COPS6-202ENST00000418625 KIF24Q5T7B8 1368 aa21.29■■□□□ 1
COPS6-202ENST00000418625 MAP3K5Q99683 1374 aa21.29■■□□□ 1
COPS6-202ENST00000418625 MSH5O43196 834 aa21.29■■□□□ 1
COPS6-202ENST00000418625 UTRNP46939 3433 aa21.29■■□□□ 1
COPS6-202ENST00000418625 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
COPS6-202ENST00000418625 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
COPS6-202ENST00000418625 NSD2O96028 1365 aa21.28■■□□□ 1
COPS6-202ENST00000418625 HMGB2P26583 209 aaKnown RBP21.28■■□□□ 1
COPS6-202ENST00000418625 COL24A1Q17RW2 1714 aa21.28■■□□□ 1
COPS6-202ENST00000418625 GPR162Q16538 588 aa21.27■■□□□ 1
COPS6-202ENST00000418625 ITGB4P16144 1822 aa21.27■□□□□ 0.99
COPS6-202ENST00000418625 C5P01031 1676 aa21.26■□□□□ 0.99
COPS6-202ENST00000418625 PPM1GO15355 546 aaPredicted RBP21.26■□□□□ 0.99
COPS6-202ENST00000418625 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
COPS6-202ENST00000418625 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
COPS6-202ENST00000418625 TAF1LQ8IZX4 1826 aa21.25■□□□□ 0.99
COPS6-202ENST00000418625 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
COPS6-202ENST00000418625 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
COPS6-202ENST00000418625 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
COPS6-202ENST00000418625 ZNF784Q8NCA9 323 aaPredicted RBP21.23■□□□□ 0.99
COPS6-202ENST00000418625 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
COPS6-202ENST00000418625 POLR3GLQ9BT43 218 aa21.22■□□□□ 0.99
COPS6-202ENST00000418625 PKD1L3Q7Z443 1732 aa21.21■□□□□ 0.99
COPS6-202ENST00000418625 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
COPS6-202ENST00000418625 ANKRD26Q9UPS8 1709 aa21.2■□□□□ 0.98
COPS6-202ENST00000418625 CYP27B1O15528 508 aa21.19■□□□□ 0.98
COPS6-202ENST00000418625 COL23A1Q86Y22 540 aaPredicted RBP21.19■□□□□ 0.98
COPS6-202ENST00000418625 FLAD1Q8NFF5 587 aa21.19■□□□□ 0.98
COPS6-202ENST00000418625 SMARCC1Q92922 1105 aaPredicted RBP21.19■□□□□ 0.98
COPS6-202ENST00000418625 SPG7Q9UQ90 795 aa21.19■□□□□ 0.98
COPS6-202ENST00000418625 PALLDQ8WX93 1383 aa21.19■□□□□ 0.98
COPS6-202ENST00000418625 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
COPS6-202ENST00000418625 CLSPNQ9HAW4 1339 aa21.17■□□□□ 0.98
COPS6-202ENST00000418625 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
COPS6-202ENST00000418625 MSL1Q68DK7 614 aa21.15■□□□□ 0.98
COPS6-202ENST00000418625 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
COPS6-202ENST00000418625 NLGN2Q8NFZ4 835 aa21.14■□□□□ 0.97
COPS6-202ENST00000418625 AK7Q96M32 723 aa21.14■□□□□ 0.97
COPS6-202ENST00000418625 GOLGB1Q14789 3259 aaKnown RBP21.14■□□□□ 0.97
COPS6-202ENST00000418625 UBR3Q6ZT12 1888 aa21.12■□□□□ 0.97
COPS6-202ENST00000418625 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
COPS6-202ENST00000418625 PIGBQ92521 554 aa21.12■□□□□ 0.97
COPS6-202ENST00000418625 EYA1Q99502 592 aa21.12■□□□□ 0.97
COPS6-202ENST00000418625 NCAPD2Q15021 1401 aa21.12■□□□□ 0.97
COPS6-202ENST00000418625 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
COPS6-202ENST00000418625 NKX1-1Q15270 411 aaPredicted RBP21.11■□□□□ 0.97
COPS6-202ENST00000418625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.977e-6■■□□□ 12.8
COPS6-202ENST00000418625 TMOD3Q9NYL9 352 aa21.11■□□□□ 0.97
COPS6-202ENST00000418625 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
COPS6-202ENST00000418625 IFNL2Q8IZJ0 200 aa21.1■□□□□ 0.97
COPS6-202ENST00000418625 EIF4G2P78344 907 aaKnown RBP eCLIP21.09■□□□□ 0.97
COPS6-202ENST00000418625 PHF14O94880 888 aa21.08■□□□□ 0.97
COPS6-202ENST00000418625 CD2APQ9Y5K6 639 aa21.07■□□□□ 0.96
COPS6-202ENST00000418625 LOC102724428A0A0B4J2F2 783 aa21.06■□□□□ 0.96
COPS6-202ENST00000418625 PHKG2P15735 406 aa21.06■□□□□ 0.96
COPS6-202ENST00000418625 SIK1P57059 783 aa21.06■□□□□ 0.96
COPS6-202ENST00000418625 EIF4A2Q14240 407 aaKnown RBP21.06■□□□□ 0.96
COPS6-202ENST00000418625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
COPS6-202ENST00000418625 YBX3P16989 372 aaKnown RBP eCLIP21.05■□□□□ 0.966e-7■■□□□ 13.3
COPS6-202ENST00000418625 ATP6V1AP38606 617 aa21.04■□□□□ 0.96
COPS6-202ENST00000418625 C1QTNF8P60827 252 aa21.04■□□□□ 0.96
COPS6-202ENST00000418625 GIGYF1O75420 1035 aaPredicted RBP21.03■□□□□ 0.96
COPS6-202ENST00000418625 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
COPS6-202ENST00000418625 SSFA2P28290 1259 aa21.03■□□□□ 0.96
COPS6-202ENST00000418625 PANK3Q9H999 370 aa21.03■□□□□ 0.96
COPS6-202ENST00000418625 ASAP1Q9ULH1 1129 aa21.03■□□□□ 0.96
COPS6-202ENST00000418625 SENP3-EIF4A1A0A087X0R7 540 aa21.02■□□□□ 0.96
COPS6-202ENST00000418625 LINC00116Q8NCU8 138 aa21.02■□□□□ 0.96
COPS6-202ENST00000418625 GNPATO15228 680 aa21.01■□□□□ 0.95
COPS6-202ENST00000418625 HSP90AB1P08238 724 aaKnown RBP21.01■□□□□ 0.95
COPS6-202ENST00000418625 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
COPS6-202ENST00000418625 PLEKHO1Q53GL0 409 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms