RNA–Protein interactions for RNA: ENST00000418408.2

ITM2C-205, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-205ENST00000418408 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
ITM2C-205ENST00000418408 FBLN1P23142 703 aa22.23■■□□□ 1.15
ITM2C-205ENST00000418408 DDX54Q8TDD1 881 aaKnown RBP22.23■■□□□ 1.15
ITM2C-205ENST00000418408 COG3Q96JB2 828 aa22.23■■□□□ 1.15
ITM2C-205ENST00000418408 SLC24A1O60721 1099 aa22.22■■□□□ 1.15
ITM2C-205ENST00000418408 PRIM1P49642 420 aaKnown RBP22.22■■□□□ 1.15
ITM2C-205ENST00000418408 LTV1Q96GA3 475 aaPredicted RBP22.21■■□□□ 1.15
ITM2C-205ENST00000418408 TAF1LQ8IZX4 1826 aa22.21■■□□□ 1.15
ITM2C-205ENST00000418408 ZCRB1Q8TBF4 217 aaKnown RBP22.2■■□□□ 1.14
ITM2C-205ENST00000418408 CGNL1Q0VF96 1302 aa22.19■■□□□ 1.14
ITM2C-205ENST00000418408 KIF20BQ96Q89 1820 aa22.19■■□□□ 1.14
ITM2C-205ENST00000418408 FYB1O15117 783 aa22.18■■□□□ 1.14
ITM2C-205ENST00000418408 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
ITM2C-205ENST00000418408 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
ITM2C-205ENST00000418408 C5P01031 1676 aa22.17■■□□□ 1.14
ITM2C-205ENST00000418408 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
ITM2C-205ENST00000418408 AMPHP49418 695 aa22.17■■□□□ 1.14
ITM2C-205ENST00000418408 KCNQ4P56696 695 aa22.17■■□□□ 1.14
ITM2C-205ENST00000418408 ITGB4P16144 1822 aa22.15■■□□□ 1.14
ITM2C-205ENST00000418408 TFCP2L1Q9NZI6 479 aa22.15■■□□□ 1.14
ITM2C-205ENST00000418408 PKD1L3Q7Z443 1732 aa22.14■■□□□ 1.14
ITM2C-205ENST00000418408 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
ITM2C-205ENST00000418408 KIF24Q5T7B8 1368 aa22.14■■□□□ 1.14
ITM2C-205ENST00000418408 POLD1P28340 1107 aa22.14■■□□□ 1.13
ITM2C-205ENST00000418408 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
ITM2C-205ENST00000418408 ANKRD26Q9UPS8 1709 aa22.14■■□□□ 1.13
ITM2C-205ENST00000418408 NCAPD2Q15021 1401 aa22.14■■□□□ 1.13
ITM2C-205ENST00000418408 INSRP06213 1382 aa22.13■■□□□ 1.13
ITM2C-205ENST00000418408 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
ITM2C-205ENST00000418408 CCNL1Q9UK58 526 aaPredicted RBP22.12■■□□□ 1.13
ITM2C-205ENST00000418408 NLGN2Q8NFZ4 835 aa22.11■■□□□ 1.13
ITM2C-205ENST00000418408 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
ITM2C-205ENST00000418408 USP47Q96K76 1375 aa22.11■■□□□ 1.13
ITM2C-205ENST00000418408 MAP2P11137 1827 aaKnown RBP22.1■■□□□ 1.13
ITM2C-205ENST00000418408 C1QTNF8P60827 252 aa22.1■■□□□ 1.13
ITM2C-205ENST00000418408 GPR162Q16538 588 aa22.1■■□□□ 1.13
ITM2C-205ENST00000418408 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
ITM2C-205ENST00000418408 UBR3Q6ZT12 1888 aa22.09■■□□□ 1.13
ITM2C-205ENST00000418408 SMG6Q86US8 1419 aaKnown RBP22.09■■□□□ 1.13
ITM2C-205ENST00000418408 FLT4P35916 1363 aa22.09■■□□□ 1.13
ITM2C-205ENST00000418408 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
ITM2C-205ENST00000418408 USHBP1Q8N6Y0 703 aa22.08■■□□□ 1.13
ITM2C-205ENST00000418408 TMF1P82094 1093 aa22.07■■□□□ 1.12
ITM2C-205ENST00000418408 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
ITM2C-205ENST00000418408 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
ITM2C-205ENST00000418408 C4BP0C0L5 1744 aa22.06■■□□□ 1.12
ITM2C-205ENST00000418408 CYP27B1O15528 508 aa22.06■■□□□ 1.12
ITM2C-205ENST00000418408 RAPGEF4Q8WZA2 1011 aa22.06■■□□□ 1.12
ITM2C-205ENST00000418408 YBX3P16989 372 aaKnown RBP eCLIP22.05■■□□□ 1.121e-6■□□□□ 8.8
ITM2C-205ENST00000418408 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
ITM2C-205ENST00000418408 CARD14Q9BXL6 1004 aa22.04■■□□□ 1.12
ITM2C-205ENST00000418408 PALLDQ8WX93 1383 aa22.03■■□□□ 1.12
ITM2C-205ENST00000418408 HMGB2P26583 209 aaKnown RBP22.02■■□□□ 1.12
ITM2C-205ENST00000418408 NKX1-1Q15270 411 aaPredicted RBP22.02■■□□□ 1.12
ITM2C-205ENST00000418408 KLHL34Q8N239 644 aa22.01■■□□□ 1.11
ITM2C-205ENST00000418408 GRIN3BO60391 1043 aa22■■□□□ 1.11
ITM2C-205ENST00000418408 FLAD1Q8NFF5 587 aa22■■□□□ 1.11
ITM2C-205ENST00000418408 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
ITM2C-205ENST00000418408 AMIGO3Q86WK7 504 aa21.99■■□□□ 1.11
ITM2C-205ENST00000418408 CD2APQ9Y5K6 639 aa21.99■■□□□ 1.11
ITM2C-205ENST00000418408 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
ITM2C-205ENST00000418408 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
ITM2C-205ENST00000418408 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
ITM2C-205ENST00000418408 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
ITM2C-205ENST00000418408 MSL1Q68DK7 614 aa21.96■■□□□ 1.11
ITM2C-205ENST00000418408 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
ITM2C-205ENST00000418408 PIGBQ92521 554 aa21.96■■□□□ 1.11
ITM2C-205ENST00000418408 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
ITM2C-205ENST00000418408 WASHC2AQ641Q2 1341 aa21.96■■□□□ 1.11
ITM2C-205ENST00000418408 ADCY9O60503 1353 aa21.96■■□□□ 1.11
ITM2C-205ENST00000418408 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
ITM2C-205ENST00000418408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
ITM2C-205ENST00000418408 MSH5O43196 834 aa21.94■■□□□ 1.1
ITM2C-205ENST00000418408 PLEKHG2Q9H7P9 1386 aa21.94■■□□□ 1.1
ITM2C-205ENST00000418408 ZNF831Q5JPB2 1677 aa21.94■■□□□ 1.1
ITM2C-205ENST00000418408 KIF13BQ9NQT8 1826 aa21.94■■□□□ 1.1
ITM2C-205ENST00000418408 EYA1Q99502 592 aa21.91■■□□□ 1.1
ITM2C-205ENST00000418408 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
ITM2C-205ENST00000418408 KIAA1551Q9HCM1 1747 aa21.9■■□□□ 1.1
ITM2C-205ENST00000418408 CICQ96RK0 1608 aaPredicted RBP21.89■■□□□ 1.09
ITM2C-205ENST00000418408 LOC102724428A0A0B4J2F2 783 aa21.89■■□□□ 1.09
ITM2C-205ENST00000418408 SSFA2P28290 1259 aa21.89■■□□□ 1.09
ITM2C-205ENST00000418408 SIK1P57059 783 aa21.89■■□□□ 1.09
ITM2C-205ENST00000418408 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
ITM2C-205ENST00000418408 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
ITM2C-205ENST00000418408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
ITM2C-205ENST00000418408 AK7Q96M32 723 aa21.88■■□□□ 1.09
ITM2C-205ENST00000418408 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
ITM2C-205ENST00000418408 KDRP35968 1356 aa21.87■■□□□ 1.09
ITM2C-205ENST00000418408 COL5A3P25940 1745 aaPredicted RBP21.86■■□□□ 1.09
ITM2C-205ENST00000418408 PHKG2P15735 406 aa21.86■■□□□ 1.09
ITM2C-205ENST00000418408 ITPK1Q13572 414 aa21.86■■□□□ 1.09
ITM2C-205ENST00000418408 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
ITM2C-205ENST00000418408 TIMELESSQ9UNS1 1208 aa21.86■■□□□ 1.09
ITM2C-205ENST00000418408 ASAP1Q9ULH1 1129 aa21.85■■□□□ 1.09
ITM2C-205ENST00000418408 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
ITM2C-205ENST00000418408 IGSF1Q8N6C5 1336 aa21.83■■□□□ 1.09
ITM2C-205ENST00000418408 IFNL2Q8IZJ0 200 aa21.83■■□□□ 1.09
ITM2C-205ENST00000418408 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
ITM2C-205ENST00000418408 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms