RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
PTCH1-205ENST00000418258 SSR1P43307 286 aaKnown RBP13.22□□□□□ -0.29
PTCH1-205ENST00000418258 CAVIN4Q5BKX8 364 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-205ENST00000418258 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-205ENST00000418258 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
PTCH1-205ENST00000418258 TXLNBQ8N3L3 684 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 RAPGEF3O95398 923 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 RABEP1Q15276 862 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 BCAR3O75815 825 aa13.22□□□□□ -0.29
PTCH1-205ENST00000418258 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.29
PTCH1-205ENST00000418258 AEBP1Q8IUX7 1158 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 CTNNA3Q9UI47 895 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 IGF1RP08069 1367 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 MBD3O95983 291 aa13.21□□□□□ -0.29
PTCH1-205ENST00000418258 GBP2P32456 591 aaPredicted RBP13.21□□□□□ -0.3
PTCH1-205ENST00000418258 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.3
PTCH1-205ENST00000418258 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.3
PTCH1-205ENST00000418258 CEP57L1Q8IYX8 460 aa13.21□□□□□ -0.3
PTCH1-205ENST00000418258 PPP4R3AQ6IN85 833 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 LARP1BQ659C4 914 aaKnown RBP13.2□□□□□ -0.3
PTCH1-205ENST00000418258 CT47B1P0C2W7 299 aaPredicted RBP13.2□□□□□ -0.3
PTCH1-205ENST00000418258 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 MPRIPQ6WCQ1 1025 aa13.2□□□□□ -0.3
PTCH1-205ENST00000418258 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
PTCH1-205ENST00000418258 CENPHQ9H3R5 247 aa13.19□□□□□ -0.3
PTCH1-205ENST00000418258 MINDY4BA8MYZ0 360 aa13.19□□□□□ -0.3
PTCH1-205ENST00000418258 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-205ENST00000418258 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
PTCH1-205ENST00000418258 NGLY1Q96IV0 654 aa13.19□□□□□ -0.3
PTCH1-205ENST00000418258 ZNF219Q9P2Y4 722 aaPredicted RBP13.19□□□□□ -0.3
PTCH1-205ENST00000418258 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
PTCH1-205ENST00000418258 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
PTCH1-205ENST00000418258 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 CFTRP13569 1480 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 EPRSP07814 1512 aaKnown RBP13.18□□□□□ -0.3
PTCH1-205ENST00000418258 TRAK2O60296 914 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 KRT85P78386 507 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 WASF1Q92558 559 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
PTCH1-205ENST00000418258 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 TSPYL1Q9H0U9 437 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
PTCH1-205ENST00000418258 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
PTCH1-205ENST00000418258 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
PTCH1-205ENST00000418258 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
PTCH1-205ENST00000418258 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
PTCH1-205ENST00000418258 PDRG1Q9NUG6 133 aa13.16□□□□□ -0.3
PTCH1-205ENST00000418258 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
PTCH1-205ENST00000418258 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
PTCH1-205ENST00000418258 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
PTCH1-205ENST00000418258 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
PTCH1-205ENST00000418258 IL1RAPL2Q9NP60 686 aa13.16□□□□□ -0.3
PTCH1-205ENST00000418258 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 HFM1A2PYH4 1435 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
PTCH1-205ENST00000418258 KRT32Q14532 448 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
PTCH1-205ENST00000418258 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
PTCH1-205ENST00000418258 MRE11P49959 708 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 ANAPC15P60006 121 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 NUDT16Q96DE0 195 aaKnown RBP13.15□□□□□ -0.3
PTCH1-205ENST00000418258 SPATA32Q96LK8 384 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
PTCH1-205ENST00000418258 EIF5P55010 431 aaKnown RBP13.14□□□□□ -0.31
PTCH1-205ENST00000418258 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-205ENST00000418258 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-205ENST00000418258 PLCD4Q9BRC7 762 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 CUL5Q93034 780 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 CASTP20810 708 aaKnown RBP13.14□□□□□ -0.31
PTCH1-205ENST00000418258 CHD1LQ86WJ1 897 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 WDR63Q8IWG1 891 aa13.14□□□□□ -0.31
PTCH1-205ENST00000418258 LEKR1Q6ZMV7 388 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 NAPBQ9H115 298 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 U3KPZ7 1027 aaPredicted RBP13.13□□□□□ -0.31
PTCH1-205ENST00000418258 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 MYD88Q99836 296 aa13.13□□□□□ -0.31
PTCH1-205ENST00000418258 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms