RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
LINC00940-201ENST00000418006 GCP02774 474 aa17.49■□□□□ 0.39
LINC00940-201ENST00000418006 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
LINC00940-201ENST00000418006 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
LINC00940-201ENST00000418006 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
LINC00940-201ENST00000418006 TRIM27P14373 513 aa17.47■□□□□ 0.39
LINC00940-201ENST00000418006 DZIP1LQ8IYY4 767 aaKnown RBP17.47■□□□□ 0.39
LINC00940-201ENST00000418006 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
LINC00940-201ENST00000418006 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
LINC00940-201ENST00000418006 IP6K1Q92551 441 aa17.47■□□□□ 0.39
LINC00940-201ENST00000418006 RGPD1P0DJD0 1748 aa17.47■□□□□ 0.39
LINC00940-201ENST00000418006 KRT24Q2M2I5 525 aa17.46■□□□□ 0.39
LINC00940-201ENST00000418006 TWISTNBQ3B726 338 aaPredicted RBP17.46■□□□□ 0.39
LINC00940-201ENST00000418006 L1TD1Q5T7N2 865 aaKnown RBP17.46■□□□□ 0.39
LINC00940-201ENST00000418006 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
LINC00940-201ENST00000418006 VAMP4O75379 141 aa17.46■□□□□ 0.39
LINC00940-201ENST00000418006 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.39
LINC00940-201ENST00000418006 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 ZNF335Q9H4Z2 1342 aaPredicted RBP17.45■□□□□ 0.38
LINC00940-201ENST00000418006 LTN1O94822 1766 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 IGHDP01880 384 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 ITPRIPQ8IWB1 547 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
LINC00940-201ENST00000418006 MST1RQ04912 1400 aa17.44■□□□□ 0.38
LINC00940-201ENST00000418006 KDRP35968 1356 aa17.44■□□□□ 0.38
LINC00940-201ENST00000418006 MSH6P52701 1360 aa17.44■□□□□ 0.38
LINC00940-201ENST00000418006 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
LINC00940-201ENST00000418006 CABLES1Q8TDN4 633 aa17.43■□□□□ 0.38
LINC00940-201ENST00000418006 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
LINC00940-201ENST00000418006 BECN1Q14457 450 aa17.43■□□□□ 0.38
LINC00940-201ENST00000418006 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
LINC00940-201ENST00000418006 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
LINC00940-201ENST00000418006 NFAT5O94916 1531 aa17.42■□□□□ 0.38
LINC00940-201ENST00000418006 ALDH1L2Q3SY69 923 aa17.42■□□□□ 0.38
LINC00940-201ENST00000418006 SEC24BO95487 1268 aa17.42■□□□□ 0.38
LINC00940-201ENST00000418006 KIF16BQ96L93 1317 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
LINC00940-201ENST00000418006 ARHGEF25Q86VW2 580 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 TMEM57Q8N5G2 664 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 AXIN2Q9Y2T1 843 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
LINC00940-201ENST00000418006 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
LINC00940-201ENST00000418006 GNAT3A8MTJ3 354 aa17.4■□□□□ 0.38
LINC00940-201ENST00000418006 CHL1O00533 1208 aa17.4■□□□□ 0.38
LINC00940-201ENST00000418006 PKNOX2Q96KN3 472 aa17.4■□□□□ 0.38
LINC00940-201ENST00000418006 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
LINC00940-201ENST00000418006 MRPL50Q8N5N7 158 aaKnown RBP17.39■□□□□ 0.38
LINC00940-201ENST00000418006 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
LINC00940-201ENST00000418006 ANTXR1Q9H6X2 564 aa17.39■□□□□ 0.37
LINC00940-201ENST00000418006 STRCQ7RTU9 1775 aa17.38■□□□□ 0.37
LINC00940-201ENST00000418006 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
LINC00940-201ENST00000418006 GLIPR1L2Q4G1C9 344 aa17.37■□□□□ 0.37
LINC00940-201ENST00000418006 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
LINC00940-201ENST00000418006 CRB1P82279 1406 aa17.37■□□□□ 0.37
LINC00940-201ENST00000418006 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
LINC00940-201ENST00000418006 XRCC6P12956 609 aaKnown RBP eCLIP17.36■□□□□ 0.37
LINC00940-201ENST00000418006 TRPM3Q9HCF6 1732 aaPredicted RBP17.36■□□□□ 0.37
LINC00940-201ENST00000418006 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
LINC00940-201ENST00000418006 DCCP43146 1447 aa17.35■□□□□ 0.37
LINC00940-201ENST00000418006 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
LINC00940-201ENST00000418006 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
LINC00940-201ENST00000418006 IL17REQ8NFR9 667 aa17.35■□□□□ 0.37
LINC00940-201ENST00000418006 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
LINC00940-201ENST00000418006 ARXQ96QS3 562 aa17.35■□□□□ 0.37
LINC00940-201ENST00000418006 RGPD2P0DJD1 1756 aa17.34■□□□□ 0.37
LINC00940-201ENST00000418006 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
LINC00940-201ENST00000418006 NCOA3Q9Y6Q9 1424 aa17.34■□□□□ 0.37
LINC00940-201ENST00000418006 MAP3K5Q99683 1374 aa17.34■□□□□ 0.37
LINC00940-201ENST00000418006 SLAIN2Q9P270 581 aa17.33■□□□□ 0.37
LINC00940-201ENST00000418006 SLIT3O75094 1523 aa17.33■□□□□ 0.36
LINC00940-201ENST00000418006 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.36
LINC00940-201ENST00000418006 FSD2A1L4K1 749 aa17.32■□□□□ 0.36
LINC00940-201ENST00000418006 LGR6Q9HBX8 967 aa17.32■□□□□ 0.36
LINC00940-201ENST00000418006 CLCN1P35523 988 aa17.32■□□□□ 0.36
LINC00940-201ENST00000418006 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
LINC00940-201ENST00000418006 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
LINC00940-201ENST00000418006 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
LINC00940-201ENST00000418006 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
LINC00940-201ENST00000418006 XIRP1Q702N8 1843 aaKnown RBP17.31■□□□□ 0.36
LINC00940-201ENST00000418006 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
LINC00940-201ENST00000418006 BRPF1P55201 1214 aaPredicted RBP17.31■□□□□ 0.36
LINC00940-201ENST00000418006 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
LINC00940-201ENST00000418006 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
LINC00940-201ENST00000418006 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 AAMPQ13685 434 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 PANK2Q9BZ23 570 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
LINC00940-201ENST00000418006 TNS3Q68CZ2 1445 aa17.29■□□□□ 0.36
LINC00940-201ENST00000418006 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
LINC00940-201ENST00000418006 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
LINC00940-201ENST00000418006 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
LINC00940-201ENST00000418006 ERBB3P21860 1342 aa17.29■□□□□ 0.36
LINC00940-201ENST00000418006 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
LINC00940-201ENST00000418006 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms