RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.57■■□□□ 1.362e-6■□□□□ 9.5
COMMD3-BMI1-201ENST00000417470 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 SULT6B1Q6IMI4 303 aa23.53■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 NUDCQ9Y266 331 aa23.53■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
COMMD3-BMI1-201ENST00000417470 SPG7Q9UQ90 795 aa23.51■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 AEBP1Q8IUX7 1158 aa23.5■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 PCDH11XQ9BZA7 1347 aa23.49■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 PCDH11YQ9BZA8 1340 aa23.49■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 PKD1L3Q7Z443 1732 aa23.47■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 U2SURPO15042 1029 aaKnown RBP23.47■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 PLEKHO1Q53GL0 409 aaPredicted RBP23.47■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 DDX54Q8TDD1 881 aaKnown RBP23.47■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 CYP27B1O15528 508 aa23.46■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 ANP32CO43423 234 aa23.46■■□□□ 1.35
COMMD3-BMI1-201ENST00000417470 SHANK3Q9BYB0 1731 aa23.45■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 HMOX1P09601 288 aa23.45■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 NKX1-1Q15270 411 aaPredicted RBP23.45■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 FCHSD2O94868 740 aa23.44■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 IFNL2Q8IZJ0 200 aa23.43■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 BCL11BQ9C0K0 894 aaPredicted RBP23.43■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 TRIM37O94972 964 aa23.42■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 U2AF1L5P0DN76 240 aaPredicted RBP23.42■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 U2AF1Q01081 240 aaKnown RBP eCLIP23.42■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 RSPH6AQ9H0K4 717 aa23.42■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 PHKG2P15735 406 aa23.41■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
COMMD3-BMI1-201ENST00000417470 SBF2Q86WG5 1849 aa23.39■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PRKAR2BP31323 418 aa23.36■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 BAG6P46379 1132 aa23.36■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PNNQ9H307 717 aaKnown RBP23.36■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PLSCR1O15162 318 aa23.35■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 KCNQ2O43526 872 aa23.35■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 AKAP4Q5JQC9 854 aa23.35■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 NHSQ6T4R5 1651 aa23.35■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 TNS1Q9HBL0 1735 aaKnown RBP23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 APBA3O96018 575 aa23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 C1orf141Q5JVX7 400 aa23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 DCAF5Q96JK2 942 aa23.34■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PTF1AQ7RTS3 328 aa23.33■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PLEKHF1Q96S99 279 aa23.33■■□□□ 1.33
COMMD3-BMI1-201ENST00000417470 PHACTR3Q96KR7 559 aa23.32■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 CAMKK2Q96RR4 588 aa23.31■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 DEFB132Q7Z7B7 95 aa23.3■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 WDR43Q15061 677 aaKnown RBP eCLIP23.29■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 NEFMP07197 916 aa23.28■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 KDM6AO15550 1401 aaPredicted RBP23.27■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 ADAMTS8Q9UP79 889 aa23.27■■□□□ 1.32
COMMD3-BMI1-201ENST00000417470 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 RGPD3A6NKT7 1758 aaPredicted RBP23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 RGPD4Q7Z3J3 1758 aa23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 GNAT3A8MTJ3 354 aa23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 MPRIPQ6WCQ1 1025 aa23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 RNMTO43148 476 aaKnown RBP23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 HTATSF1O43719 755 aaKnown RBP23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 EZH2Q15910 746 aaKnown RBP23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 PNISRQ8TF01 805 aaKnown RBP23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 PIGBQ92521 554 aa23.24■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 ADAMTS7Q9UKP4 1686 aa23.23■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 TMOD3Q9NYL9 352 aa23.23■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 BTAF1O14981 1849 aa23.23■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 CABP4P57796 275 aa23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 DIEXFQ68CQ4 756 aaKnown RBP23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 PROM2Q8N271 834 aa23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 ITGB4P16144 1822 aa23.21■■□□□ 1.31
COMMD3-BMI1-201ENST00000417470 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 SLC52A2Q9HAB3 445 aa23.2■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 CEMIPQ8WUJ3 1361 aa23.19■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 TXNRD1Q16881 649 aa23.19■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 MRC1P22897 1456 aa23.18■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 RTF1Q92541 710 aaKnown RBP23.17■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 HMGB2P26583 209 aaKnown RBP23.16■■□□□ 1.3
COMMD3-BMI1-201ENST00000417470 ATG3Q9NT62 314 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms