RNA–Protein interactions for RNA: ENST00000417432.1

CNOT4P1-201, Transcript of CCR4-NOT transcription complex subunit 4 pseudogene 1, humanhuman

BASIC

Gene CNOT4P1, Length 1,199 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4P1-201ENST00000417432 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
CNOT4P1-201ENST00000417432 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
CNOT4P1-201ENST00000417432 ITGB4P16144 1822 aa12.29□□□□□ -0.44
CNOT4P1-201ENST00000417432 MAP2P11137 1827 aaKnown RBP12.28□□□□□ -0.44
CNOT4P1-201ENST00000417432 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
CNOT4P1-201ENST00000417432 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
CNOT4P1-201ENST00000417432 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
CNOT4P1-201ENST00000417432 PTGER2P43116 358 aa12.27□□□□□ -0.45
CNOT4P1-201ENST00000417432 SYTL4Q96C24 671 aaPredicted RBP12.27□□□□□ -0.45
CNOT4P1-201ENST00000417432 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
CNOT4P1-201ENST00000417432 GGNBP2Q9H3C7 697 aa12.27□□□□□ -0.45
CNOT4P1-201ENST00000417432 FBLN1P23142 703 aa12.26□□□□□ -0.45
CNOT4P1-201ENST00000417432 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
CNOT4P1-201ENST00000417432 ZNF827Q17R98 1081 aa12.26□□□□□ -0.45
CNOT4P1-201ENST00000417432 FLT4P35916 1363 aa12.26□□□□□ -0.45
CNOT4P1-201ENST00000417432 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
CNOT4P1-201ENST00000417432 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
CNOT4P1-201ENST00000417432 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
CNOT4P1-201ENST00000417432 NSD2O96028 1365 aa12.25□□□□□ -0.45
CNOT4P1-201ENST00000417432 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
CNOT4P1-201ENST00000417432 USHBP1Q8N6Y0 703 aa12.24□□□□□ -0.45
CNOT4P1-201ENST00000417432 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
CNOT4P1-201ENST00000417432 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
CNOT4P1-201ENST00000417432 INSRP06213 1382 aa12.23□□□□□ -0.45
CNOT4P1-201ENST00000417432 FYB1O15117 783 aa12.23□□□□□ -0.45
CNOT4P1-201ENST00000417432 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
CNOT4P1-201ENST00000417432 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 ARXQ96QS3 562 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 UTRNP46939 3433 aa12.22□□□□□ -0.45
CNOT4P1-201ENST00000417432 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 TATP17735 454 aaPredicted RBP12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 KCNQ4P56696 695 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
CNOT4P1-201ENST00000417432 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
CNOT4P1-201ENST00000417432 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
CNOT4P1-201ENST00000417432 CCNL1Q9UK58 526 aaPredicted RBP12.2□□□□□ -0.46
CNOT4P1-201ENST00000417432 POLD1P28340 1107 aa12.19□□□□□ -0.46
CNOT4P1-201ENST00000417432 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
CNOT4P1-201ENST00000417432 GOLGB1Q14789 3259 aaKnown RBP12.19□□□□□ -0.46
CNOT4P1-201ENST00000417432 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
CNOT4P1-201ENST00000417432 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
CNOT4P1-201ENST00000417432 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
CNOT4P1-201ENST00000417432 NCAPD2Q15021 1401 aa12.18□□□□□ -0.46
CNOT4P1-201ENST00000417432 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
CNOT4P1-201ENST00000417432 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
CNOT4P1-201ENST00000417432 POLR3GLQ9BT43 218 aa12.16□□□□□ -0.46
CNOT4P1-201ENST00000417432 CARD14Q9BXL6 1004 aa12.16□□□□□ -0.46
CNOT4P1-201ENST00000417432 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
CNOT4P1-201ENST00000417432 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
CNOT4P1-201ENST00000417432 TIMELESSQ9UNS1 1208 aa12.15□□□□□ -0.46
CNOT4P1-201ENST00000417432 GPR162Q16538 588 aa12.14□□□□□ -0.47
CNOT4P1-201ENST00000417432 MPRIPQ6WCQ1 1025 aa12.14□□□□□ -0.47
CNOT4P1-201ENST00000417432 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
CNOT4P1-201ENST00000417432 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
CNOT4P1-201ENST00000417432 CYP27B1O15528 508 aa12.13□□□□□ -0.47
CNOT4P1-201ENST00000417432 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
CNOT4P1-201ENST00000417432 MSL1Q68DK7 614 aa12.12□□□□□ -0.47
CNOT4P1-201ENST00000417432 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
CNOT4P1-201ENST00000417432 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 TNNT2P45379 298 aaPredicted RBP12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 NLGN2Q8NFZ4 835 aa12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
CNOT4P1-201ENST00000417432 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
CNOT4P1-201ENST00000417432 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
CNOT4P1-201ENST00000417432 AK7Q96M32 723 aa12.1□□□□□ -0.47
CNOT4P1-201ENST00000417432 C4AP0C0L4 1744 aa12.09□□□□□ -0.47
CNOT4P1-201ENST00000417432 EYA1Q99502 592 aa12.09□□□□□ -0.47
CNOT4P1-201ENST00000417432 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
CNOT4P1-201ENST00000417432 PLEKHG2Q9H7P9 1386 aa12.08□□□□□ -0.48
CNOT4P1-201ENST00000417432 PHF14O94880 888 aa12.08□□□□□ -0.48
CNOT4P1-201ENST00000417432 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
CNOT4P1-201ENST00000417432 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
CNOT4P1-201ENST00000417432 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
CNOT4P1-201ENST00000417432 SCN11AQ9UI33 1791 aa12.07□□□□□ -0.48
CNOT4P1-201ENST00000417432 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
CNOT4P1-201ENST00000417432 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
CNOT4P1-201ENST00000417432 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
CNOT4P1-201ENST00000417432 PIGBQ92521 554 aa12.07□□□□□ -0.48
CNOT4P1-201ENST00000417432 LOC102724428A0A0B4J2F2 783 aa12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 PHKG2P15735 406 aa12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 SIK1P57059 783 aa12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
CNOT4P1-201ENST00000417432 TJP1Q07157 1748 aa12.05□□□□□ -0.48
CNOT4P1-201ENST00000417432 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms