RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 SPG7Q9UQ90 795 aa14.93□□□□□ -0.02
TM9SF4-203ENST00000417389 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 NPC1L1Q9UHC9 1359 aa14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 TNS1Q9HBL0 1735 aaKnown RBP14.92□□□□□ -0.02
TM9SF4-203ENST00000417389 KAT6BQ8WYB5 2073 aa14.91□□□□□ -0.02
TM9SF4-203ENST00000417389 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
TM9SF4-203ENST00000417389 SULT6B1Q6IMI4 303 aa14.9□□□□□ -0.02
TM9SF4-203ENST00000417389 CFAP53Q96M91 514 aa14.9□□□□□ -0.02
TM9SF4-203ENST00000417389 CAMKK2Q96RR4 588 aa14.9□□□□□ -0.02
TM9SF4-203ENST00000417389 BCL9O00512 1426 aa14.9□□□□□ -0.02
TM9SF4-203ENST00000417389 PARD3Q8TEW0 1356 aa14.89□□□□□ -0.03
TM9SF4-203ENST00000417389 U2SURPO15042 1029 aaKnown RBP14.89□□□□□ -0.03
TM9SF4-203ENST00000417389 PRIM1P49642 420 aaKnown RBP14.89□□□□□ -0.03
TM9SF4-203ENST00000417389 IGSF1Q8N6C5 1336 aa14.89□□□□□ -0.03
TM9SF4-203ENST00000417389 PSDA5PKW4 1024 aaPredicted RBP14.88□□□□□ -0.03
TM9SF4-203ENST00000417389 IL13P35225 146 aa14.88□□□□□ -0.03
TM9SF4-203ENST00000417389 NBPF14Q5TI25 921 aa14.88□□□□□ -0.03
TM9SF4-203ENST00000417389 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
TM9SF4-203ENST00000417389 HMOX1P09601 288 aa14.87□□□□□ -0.03
TM9SF4-203ENST00000417389 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
TM9SF4-203ENST00000417389 PLSCR1O15162 318 aa14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 CYP27B1O15528 508 aa14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 R3HDM1Q15032 1099 aaKnown RBP14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 IFNL2Q8IZJ0 200 aa14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 SBF2Q86WG5 1849 aa14.86□□□□□ -0.03
TM9SF4-203ENST00000417389 C1orf141Q5JVX7 400 aa14.85□□□□□ -0.03
TM9SF4-203ENST00000417389 ZNF530Q6P9A1 599 aaPredicted RBP14.85□□□□□ -0.03
TM9SF4-203ENST00000417389 MPRIPQ6WCQ1 1025 aa14.85□□□□□ -0.03
TM9SF4-203ENST00000417389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.03
TM9SF4-203ENST00000417389 NCAPD2Q15021 1401 aa14.84□□□□□ -0.03
TM9SF4-203ENST00000417389 NHSQ6T4R5 1651 aa14.84□□□□□ -0.03
TM9SF4-203ENST00000417389 TXNRD1Q16881 649 aa14.84□□□□□ -0.03
TM9SF4-203ENST00000417389 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
TM9SF4-203ENST00000417389 NUDCQ9Y266 331 aa14.84□□□□□ -0.03
TM9SF4-203ENST00000417389 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
TM9SF4-203ENST00000417389 PHKG2P15735 406 aa14.82□□□□□ -0.04
TM9SF4-203ENST00000417389 SHANK3Q9BYB0 1731 aa14.82□□□□□ -0.04
TM9SF4-203ENST00000417389 HSP90AB1P08238 724 aaKnown RBP14.81□□□□□ -0.04
TM9SF4-203ENST00000417389 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
TM9SF4-203ENST00000417389 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
TM9SF4-203ENST00000417389 PKD1L3Q7Z443 1732 aa14.8□□□□□ -0.04
TM9SF4-203ENST00000417389 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
TM9SF4-203ENST00000417389 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.04
TM9SF4-203ENST00000417389 BTAF1O14981 1849 aa14.8□□□□□ -0.04
TM9SF4-203ENST00000417389 PROM2Q8N271 834 aa14.79□□□□□ -0.04
TM9SF4-203ENST00000417389 RREB1Q92766 1687 aa14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 KDRP35968 1356 aa14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 NKX1-1Q15270 411 aaPredicted RBP14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 RALBP1Q15311 655 aa14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 DCAF5Q96JK2 942 aa14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 CCNL1Q9UK58 526 aaPredicted RBP14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 NUP188Q5SRE5 1749 aa14.78□□□□□ -0.04
TM9SF4-203ENST00000417389 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.04
TM9SF4-203ENST00000417389 KCNQ4P56696 695 aa14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 CABP4P57796 275 aa14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 SLC27A3Q5K4L6 730 aa14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 PIGBQ92521 554 aa14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
TM9SF4-203ENST00000417389 COL3A1P02461 1466 aaPredicted RBP14.76□□□□□ -0.05
TM9SF4-203ENST00000417389 NEFMP07197 916 aa14.76□□□□□ -0.05
TM9SF4-203ENST00000417389 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
TM9SF4-203ENST00000417389 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
TM9SF4-203ENST00000417389 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
TM9SF4-203ENST00000417389 PRKAR2BP31323 418 aa14.75□□□□□ -0.05
TM9SF4-203ENST00000417389 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
TM9SF4-203ENST00000417389 ERVV-2B6SEH9 535 aa14.74□□□□□ -0.05
TM9SF4-203ENST00000417389 SLC15A2Q16348 729 aa14.74□□□□□ -0.05
TM9SF4-203ENST00000417389 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
TM9SF4-203ENST00000417389 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
TM9SF4-203ENST00000417389 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
TM9SF4-203ENST00000417389 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
TM9SF4-203ENST00000417389 TOGARAM1Q9Y4F4 1720 aa14.72□□□□□ -0.05
TM9SF4-203ENST00000417389 MYBBP1AQ9BQG0 1328 aaKnown RBP14.72□□□□□ -0.05
TM9SF4-203ENST00000417389 MSH5O43196 834 aa14.72□□□□□ -0.05
TM9SF4-203ENST00000417389 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
TM9SF4-203ENST00000417389 ASAP1Q9ULH1 1129 aa14.72□□□□□ -0.05
TM9SF4-203ENST00000417389 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
TM9SF4-203ENST00000417389 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
TM9SF4-203ENST00000417389 RSPH6AQ9H0K4 717 aa14.71□□□□□ -0.05
TM9SF4-203ENST00000417389 KDM6AO15550 1401 aaPredicted RBP14.71□□□□□ -0.05
TM9SF4-203ENST00000417389 FCHSD2O94868 740 aa14.7□□□□□ -0.06
TM9SF4-203ENST00000417389 ZNF827Q17R98 1081 aa14.7□□□□□ -0.06
TM9SF4-203ENST00000417389 LGR6Q9HBX8 967 aa14.7□□□□□ -0.06
TM9SF4-203ENST00000417389 ITGB4P16144 1822 aa14.7□□□□□ -0.06
TM9SF4-203ENST00000417389 LOC102724428A0A0B4J2F2 783 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 GNAT3A8MTJ3 354 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 ZBTB7AO95365 584 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 ATP6V1AP38606 617 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 SIK1P57059 783 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 PHACTR3Q96KR7 559 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 AK7Q96M32 723 aa14.69□□□□□ -0.06
TM9SF4-203ENST00000417389 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms