RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
SCAF8-203ENST00000417268 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
SCAF8-203ENST00000417268 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
SCAF8-203ENST00000417268 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
SCAF8-203ENST00000417268 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.07
SCAF8-203ENST00000417268 MTERF4Q7Z6M4 381 aaKnown RBP15.46■□□□□ 0.07
SCAF8-203ENST00000417268 ANO2Q9NQ90 1003 aa15.46■□□□□ 0.07
SCAF8-203ENST00000417268 PARD3Q8TEW0 1356 aa15.46■□□□□ 0.07
SCAF8-203ENST00000417268 RRP9O43818 475 aaKnown RBP15.46■□□□□ 0.07
SCAF8-203ENST00000417268 CNNM1Q9NRU3 951 aa15.45■□□□□ 0.06
SCAF8-203ENST00000417268 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
SCAF8-203ENST00000417268 LARP1Q6PKG0 1096 aaKnown RBP15.45■□□□□ 0.06
SCAF8-203ENST00000417268 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
SCAF8-203ENST00000417268 POLR3AO14802 1390 aaPredicted RBP15.45■□□□□ 0.06
SCAF8-203ENST00000417268 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
SCAF8-203ENST00000417268 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
SCAF8-203ENST00000417268 IL16Q14005 1332 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 NUCB2P80303 420 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
SCAF8-203ENST00000417268 TPM4P67936 248 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 CCDC57Q2TAC2 916 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 ZNF592Q92610 1267 aa15.44■□□□□ 0.06
SCAF8-203ENST00000417268 DBF4Q9UBU7 674 aaPredicted RBP15.44■□□□□ 0.06
SCAF8-203ENST00000417268 TRDNQ13061 729 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 SYNE3Q6ZMZ3 975 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
SCAF8-203ENST00000417268 TEX13AQ9BXU3 409 aaPredicted RBP15.43■□□□□ 0.06
SCAF8-203ENST00000417268 CPLX2Q6PUV4 134 aaKnown RBP15.43■□□□□ 0.06
SCAF8-203ENST00000417268 CNTROBQ8N137 903 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 ZCRB1Q8TBF4 217 aaKnown RBP15.43■□□□□ 0.06
SCAF8-203ENST00000417268 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
SCAF8-203ENST00000417268 NKTRP30414 1462 aaKnown RBP15.42■□□□□ 0.06
SCAF8-203ENST00000417268 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
SCAF8-203ENST00000417268 CDC45O75419 566 aa15.42■□□□□ 0.06
SCAF8-203ENST00000417268 PER1O15534 1290 aaPredicted RBP15.42■□□□□ 0.06
SCAF8-203ENST00000417268 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
SCAF8-203ENST00000417268 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
SCAF8-203ENST00000417268 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
SCAF8-203ENST00000417268 ATP6V1DQ9Y5K8 247 aa15.42■□□□□ 0.06
SCAF8-203ENST00000417268 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
SCAF8-203ENST00000417268 ESPNB1AK53 854 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 SRGAP3O43295 1099 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 HYPKQ9NX55 129 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 ADCY10Q96PN6 1610 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 PDZRN3Q9UPQ7 1066 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 RNF214Q8ND24 703 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 PLEKHG1Q9ULL1 1385 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 TMEM57Q8N5G2 664 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
SCAF8-203ENST00000417268 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 GRPEL1Q9HAV7 217 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 IP6K1Q92551 441 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 CCDC158Q5M9N0 1113 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 CCDC39Q9UFE4 941 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 CCDC173Q0VFZ6 552 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 UBE2Q2Q8WVN8 375 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 GNL3LQ9NVN8 582 aaKnown RBP15.4■□□□□ 0.06
SCAF8-203ENST00000417268 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
SCAF8-203ENST00000417268 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.06
SCAF8-203ENST00000417268 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 AKAP17AQ02040 695 aaKnown RBP15.39■□□□□ 0.05
SCAF8-203ENST00000417268 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 HSP90AB3PQ58FF7 597 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 AKAP4Q5JQC9 854 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 CAVIN1Q6NZI2 390 aaKnown RBP15.39■□□□□ 0.05
SCAF8-203ENST00000417268 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 PTPRTO14522 1441 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
SCAF8-203ENST00000417268 CDC42BPAQ5VT25 1732 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 ZPR1O75312 459 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 SIL1Q9H173 461 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 HIP1O00291 1037 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 FAM184AQ8NB25 1140 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 MBIPQ9NS73 344 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 PODXL2Q9NZ53 605 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 UGGT1Q9NYU2 1555 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 SPATA31E1Q6ZUB1 1445 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 IL2RBP14784 551 aa15.38■□□□□ 0.05
SCAF8-203ENST00000417268 BECN2A8MW95 431 aa15.37■□□□□ 0.05
SCAF8-203ENST00000417268 SNRPA1P09661 255 aaKnown RBP15.37■□□□□ 0.05
SCAF8-203ENST00000417268 HOXC9P31274 260 aa15.37■□□□□ 0.05
SCAF8-203ENST00000417268 DNAAF4Q8WXU2 420 aa15.37■□□□□ 0.05
SCAF8-203ENST00000417268 SBNO2Q9Y2G9 1366 aa15.37■□□□□ 0.05
SCAF8-203ENST00000417268 PTPRCP08575 1304 aa15.37■□□□□ 0.05
SCAF8-203ENST00000417268 MCM4P33991 863 aa15.36■□□□□ 0.05
SCAF8-203ENST00000417268 DDB1Q16531 1140 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms