RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 KIF24Q5T7B8 1368 aa30.17■■■□□ 2.42
APTR-202ENST00000416650 ZBTB7AO95365 584 aa30.16■■■□□ 2.42
APTR-202ENST00000416650 INSRP06213 1382 aa30.15■■■□□ 2.42
APTR-202ENST00000416650 PKD1L3Q7Z443 1732 aa30.15■■■□□ 2.42
APTR-202ENST00000416650 NBPF6Q5VWK0 638 aa30.14■■■□□ 2.42
APTR-202ENST00000416650 NBPF4Q96M43 638 aa30.14■■■□□ 2.42
APTR-202ENST00000416650 CARD14Q9BXL6 1004 aa30.14■■■□□ 2.42
APTR-202ENST00000416650 ZCRB1Q8TBF4 217 aaKnown RBP30.13■■■□□ 2.41
APTR-202ENST00000416650 NSD2O96028 1365 aa30.12■■■□□ 2.41
APTR-202ENST00000416650 USHBP1Q8N6Y0 703 aa30.11■■■□□ 2.41
APTR-202ENST00000416650 CGNL1Q0VF96 1302 aa30.11■■■□□ 2.41
APTR-202ENST00000416650 COL24A1Q17RW2 1714 aa30.1■■■□□ 2.41
APTR-202ENST00000416650 ITGB4P16144 1822 aa30.1■■■□□ 2.41
APTR-202ENST00000416650 PTGER2P43116 358 aa30.1■■■□□ 2.41
APTR-202ENST00000416650 HSP90AB2PQ58FF8 381 aa30.1■■■□□ 2.41
APTR-202ENST00000416650 LRRC4BQ9NT99 713 aa30.1■■■□□ 2.41
APTR-202ENST00000416650 ATF5Q9Y2D1 282 aaPredicted RBP30.09■■■□□ 2.41
APTR-202ENST00000416650 TOGARAM1Q9Y4F4 1720 aa30.09■■■□□ 2.41
APTR-202ENST00000416650 ZNF827Q17R98 1081 aa30.08■■■□□ 2.41
APTR-202ENST00000416650 RAPGEF4Q8WZA2 1011 aa30.08■■■□□ 2.41
APTR-202ENST00000416650 SYTL4Q96C24 671 aaPredicted RBP30.08■■■□□ 2.41
APTR-202ENST00000416650 MTFR1LQ9H019 292 aa30.08■■■□□ 2.41
APTR-202ENST00000416650 PRIM1P49642 420 aaKnown RBP30.07■■■□□ 2.4
APTR-202ENST00000416650 SLC27A3Q5K4L6 730 aa30.07■■■□□ 2.4
APTR-202ENST00000416650 TAF1LQ8IZX4 1826 aa30.06■■■□□ 2.4
APTR-202ENST00000416650 C5P01031 1676 aa30.05■■■□□ 2.4
APTR-202ENST00000416650 EMILIN1Q9Y6C2 1016 aa30.05■■■□□ 2.4
APTR-202ENST00000416650 NCAPD2Q15021 1401 aa30.05■■■□□ 2.4
APTR-202ENST00000416650 TATP17735 454 aaPredicted RBP30.04■■■□□ 2.4
APTR-202ENST00000416650 SGIP1Q9BQI5 828 aa30.03■■■□□ 2.4
APTR-202ENST00000416650 PCDH11XQ9BZA7 1347 aa30.02■■■□□ 2.4
APTR-202ENST00000416650 PCDH11YQ9BZA8 1340 aa30.02■■■□□ 2.4
APTR-202ENST00000416650 AKT1S1Q96B36 256 aa30.02■■■□□ 2.4
APTR-202ENST00000416650 DCAF8L1A6NGE4 600 aa29.99■■■□□ 2.39
APTR-202ENST00000416650 POLR3GLQ9BT43 218 aa29.97■■■□□ 2.39
APTR-202ENST00000416650 CHD4Q14839 1912 aa29.96■■■□□ 2.39
APTR-202ENST00000416650 KCNQ4P56696 695 aa29.96■■■□□ 2.39
APTR-202ENST00000416650 EIF4G2P78344 907 aaKnown RBP eCLIP29.96■■■□□ 2.39
APTR-202ENST00000416650 FHDC1Q9C0D6 1143 aaPredicted RBP29.96■■■□□ 2.39
APTR-202ENST00000416650 PNPLA7Q6ZV29 1317 aa29.96■■■□□ 2.39
APTR-202ENST00000416650 PPM1GO15355 546 aaPredicted RBP29.95■■■□□ 2.39
APTR-202ENST00000416650 WASHC2AQ641Q2 1341 aa29.95■■■□□ 2.38
APTR-202ENST00000416650 HSPA5P11021 654 aaKnown RBP29.93■■■□□ 2.38
APTR-202ENST00000416650 YY1P25490 414 aa29.93■■■□□ 2.38
APTR-202ENST00000416650 CCNL1Q9UK58 526 aaPredicted RBP29.93■■■□□ 2.38
APTR-202ENST00000416650 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
APTR-202ENST00000416650 ARXQ96QS3 562 aa29.92■■■□□ 2.38
APTR-202ENST00000416650 SYT17Q9BSW7 474 aa29.92■■■□□ 2.38
APTR-202ENST00000416650 MAP3K5Q99683 1374 aa29.91■■■□□ 2.38
APTR-202ENST00000416650 CYP27B1O15528 508 aa29.91■■■□□ 2.38
APTR-202ENST00000416650 SLC16A10Q8TF71 515 aa29.91■■■□□ 2.38
APTR-202ENST00000416650 TFCP2L1Q9NZI6 479 aa29.91■■■□□ 2.38
APTR-202ENST00000416650 POLKQ9UBT6 870 aa29.89■■■□□ 2.38
APTR-202ENST00000416650 UTRNP46939 3433 aa29.89■■■□□ 2.38
APTR-202ENST00000416650 C4BP0C0L5 1744 aa29.88■■■□□ 2.37
APTR-202ENST00000416650 PALLDQ8WX93 1383 aa29.87■■■□□ 2.37
APTR-202ENST00000416650 UBR3Q6ZT12 1888 aa29.87■■■□□ 2.37
APTR-202ENST00000416650 EYA1Q99502 592 aa29.86■■■□□ 2.37
APTR-202ENST00000416650 SPG7Q9UQ90 795 aa29.84■■■□□ 2.37
APTR-202ENST00000416650 TNNT2P45379 298 aaPredicted RBP29.83■■■□□ 2.37
APTR-202ENST00000416650 MPRIPQ6WCQ1 1025 aa29.83■■■□□ 2.37
APTR-202ENST00000416650 POLD1P28340 1107 aa29.82■■■□□ 2.36
APTR-202ENST00000416650 PANK3Q9H999 370 aa29.82■■■□□ 2.36
APTR-202ENST00000416650 PLEKHG2Q9H7P9 1386 aa29.81■■■□□ 2.36
APTR-202ENST00000416650 EIF4A2Q14240 407 aaKnown RBP29.8■■■□□ 2.36
APTR-202ENST00000416650 NKX1-1Q15270 411 aaPredicted RBP29.8■■■□□ 2.36
APTR-202ENST00000416650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.8■■■□□ 2.366e-6■□□□□ 8.9
APTR-202ENST00000416650 SMARCC1Q92922 1105 aaPredicted RBP29.77■■■□□ 2.36
APTR-202ENST00000416650 IGSF1Q8N6C5 1336 aa29.76■■■□□ 2.36
APTR-202ENST00000416650 HMGB2P26583 209 aaKnown RBP29.76■■■□□ 2.35
APTR-202ENST00000416650 COL23A1Q86Y22 540 aaPredicted RBP29.76■■■□□ 2.35
APTR-202ENST00000416650 MSH5O43196 834 aa29.75■■■□□ 2.35
APTR-202ENST00000416650 PIGBQ92521 554 aa29.75■■■□□ 2.35
APTR-202ENST00000416650 GOLGB1Q14789 3259 aaKnown RBP29.75■■■□□ 2.35
APTR-202ENST00000416650 KLHL34Q8N239 644 aa29.74■■■□□ 2.35
APTR-202ENST00000416650 PHKG2P15735 406 aa29.73■■■□□ 2.35
APTR-202ENST00000416650 IFNL2Q8IZJ0 200 aa29.73■■■□□ 2.35
APTR-202ENST00000416650 ZNF831Q5JPB2 1677 aa29.72■■■□□ 2.35
APTR-202ENST00000416650 TMOD3Q9NYL9 352 aa29.7■■■□□ 2.35
APTR-202ENST00000416650 VIRMAQ69YN4 1812 aaKnown RBP29.7■■■□□ 2.34
APTR-202ENST00000416650 COL5A3P25940 1745 aaPredicted RBP29.69■■■□□ 2.34
APTR-202ENST00000416650 FLAD1Q8NFF5 587 aa29.69■■■□□ 2.34
APTR-202ENST00000416650 MORC1Q86VD1 984 aa29.68■■■□□ 2.34
APTR-202ENST00000416650 AK7Q96M32 723 aa29.68■■■□□ 2.34
APTR-202ENST00000416650 MSL1Q68DK7 614 aa29.67■■■□□ 2.34
APTR-202ENST00000416650 SCN11AQ9UI33 1791 aa29.65■■■□□ 2.34
APTR-202ENST00000416650 LOC102724428A0A0B4J2F2 783 aa29.65■■■□□ 2.34
APTR-202ENST00000416650 SIK1P57059 783 aa29.65■■■□□ 2.34
APTR-202ENST00000416650 NLGN2Q8NFZ4 835 aa29.65■■■□□ 2.34
APTR-202ENST00000416650 KNSTRNQ9Y448 316 aa29.65■■■□□ 2.34
APTR-202ENST00000416650 GPR162Q16538 588 aa29.64■■■□□ 2.34
APTR-202ENST00000416650 ASAP1Q9ULH1 1129 aa29.64■■■□□ 2.34
APTR-202ENST00000416650 AMIGO3Q86WK7 504 aa29.63■■■□□ 2.33
APTR-202ENST00000416650 KIF7Q2M1P5 1343 aa29.63■■■□□ 2.33
APTR-202ENST00000416650 KDRP35968 1356 aa29.62■■■□□ 2.33
APTR-202ENST00000416650 KDM6AO15550 1401 aaPredicted RBP29.62■■■□□ 2.33
APTR-202ENST00000416650 LINC00116Q8NCU8 138 aa29.61■■■□□ 2.33
APTR-202ENST00000416650 PHF14O94880 888 aa29.59■■■□□ 2.33
APTR-202ENST00000416650 PLEKHO1Q53GL0 409 aaPredicted RBP29.59■■■□□ 2.33
APTR-202ENST00000416650 ZNF784Q8NCA9 323 aaPredicted RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms