RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
SNX30-202ENST00000416585 C5P01031 1676 aa15.82■□□□□ 0.12
SNX30-202ENST00000416585 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
SNX30-202ENST00000416585 MEGF6O75095 1541 aa15.81■□□□□ 0.12
SNX30-202ENST00000416585 PTGER2P43116 358 aa15.81■□□□□ 0.12
SNX30-202ENST00000416585 ANKRD26Q9UPS8 1709 aa15.81■□□□□ 0.12
SNX30-202ENST00000416585 COL24A1Q17RW2 1714 aa15.8■□□□□ 0.12
SNX30-202ENST00000416585 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
SNX30-202ENST00000416585 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
SNX30-202ENST00000416585 FHDC1Q9C0D6 1143 aaPredicted RBP15.8■□□□□ 0.12
SNX30-202ENST00000416585 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
SNX30-202ENST00000416585 FBLN1P23142 703 aa15.79■□□□□ 0.12
SNX30-202ENST00000416585 ARXQ96QS3 562 aa15.79■□□□□ 0.12
SNX30-202ENST00000416585 FLT4P35916 1363 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 PKD1L3Q7Z443 1732 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 FYB1O15117 783 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 POLD1P28340 1107 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
SNX30-202ENST00000416585 ZNF827Q17R98 1081 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 KLHL34Q8N239 644 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 TFCP2L1Q9NZI6 479 aa15.78■□□□□ 0.12
SNX30-202ENST00000416585 SLC16A10Q8TF71 515 aa15.77■□□□□ 0.12
SNX30-202ENST00000416585 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.12
SNX30-202ENST00000416585 KIF24Q5T7B8 1368 aa15.76■□□□□ 0.11
SNX30-202ENST00000416585 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
SNX30-202ENST00000416585 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
SNX30-202ENST00000416585 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
SNX30-202ENST00000416585 USHBP1Q8N6Y0 703 aa15.76■□□□□ 0.11
SNX30-202ENST00000416585 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
SNX30-202ENST00000416585 INSRP06213 1382 aa15.75■□□□□ 0.11
SNX30-202ENST00000416585 MSH5O43196 834 aa15.75■□□□□ 0.11
SNX30-202ENST00000416585 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
SNX30-202ENST00000416585 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
SNX30-202ENST00000416585 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
SNX30-202ENST00000416585 TOGARAM1Q9Y4F4 1720 aa15.74■□□□□ 0.11
SNX30-202ENST00000416585 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
SNX30-202ENST00000416585 SGIP1Q9BQI5 828 aa15.74■□□□□ 0.11
SNX30-202ENST00000416585 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
SNX30-202ENST00000416585 NSD2O96028 1365 aa15.73■□□□□ 0.11
SNX30-202ENST00000416585 MAP3K5Q99683 1374 aa15.73■□□□□ 0.11
SNX30-202ENST00000416585 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
SNX30-202ENST00000416585 PPM1GO15355 546 aaPredicted RBP15.72■□□□□ 0.11
SNX30-202ENST00000416585 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
SNX30-202ENST00000416585 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
SNX30-202ENST00000416585 KCNQ4P56696 695 aa15.71■□□□□ 0.11
SNX30-202ENST00000416585 GPR162Q16538 588 aa15.71■□□□□ 0.11
SNX30-202ENST00000416585 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
SNX30-202ENST00000416585 C4BP0C0L5 1744 aa15.7■□□□□ 0.1
SNX30-202ENST00000416585 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
SNX30-202ENST00000416585 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
SNX30-202ENST00000416585 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
SNX30-202ENST00000416585 MPRIPQ6WCQ1 1025 aa15.68■□□□□ 0.1
SNX30-202ENST00000416585 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
SNX30-202ENST00000416585 EMILIN1Q9Y6C2 1016 aa15.68■□□□□ 0.1
SNX30-202ENST00000416585 PALLDQ8WX93 1383 aa15.67■□□□□ 0.1
SNX30-202ENST00000416585 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
SNX30-202ENST00000416585 FLAD1Q8NFF5 587 aa15.66■□□□□ 0.1
SNX30-202ENST00000416585 CARD14Q9BXL6 1004 aa15.66■□□□□ 0.1
SNX30-202ENST00000416585 AK7Q96M32 723 aa15.65■□□□□ 0.1
SNX30-202ENST00000416585 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
SNX30-202ENST00000416585 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
SNX30-202ENST00000416585 NCAPD2Q15021 1401 aa15.63■□□□□ 0.09
SNX30-202ENST00000416585 COL23A1Q86Y22 540 aaPredicted RBP15.63■□□□□ 0.09
SNX30-202ENST00000416585 WASHC2AQ641Q2 1341 aa15.63■□□□□ 0.09
SNX30-202ENST00000416585 CYP27B1O15528 508 aa15.62■□□□□ 0.09
SNX30-202ENST00000416585 MSL1Q68DK7 614 aa15.62■□□□□ 0.09
SNX30-202ENST00000416585 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
SNX30-202ENST00000416585 EIF4G2P78344 907 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNX30-202ENST00000416585 TMOD3Q9NYL9 352 aa15.61■□□□□ 0.09
SNX30-202ENST00000416585 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
SNX30-202ENST00000416585 EYA1Q99502 592 aa15.6■□□□□ 0.09
SNX30-202ENST00000416585 GRIN3BO60391 1043 aa15.59■□□□□ 0.09
SNX30-202ENST00000416585 PHF14O94880 888 aa15.59■□□□□ 0.09
SNX30-202ENST00000416585 NLGN2Q8NFZ4 835 aa15.59■□□□□ 0.09
SNX30-202ENST00000416585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■■■ 29.8
SNX30-202ENST00000416585 ZNF831Q5JPB2 1677 aa15.58■□□□□ 0.08
SNX30-202ENST00000416585 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
SNX30-202ENST00000416585 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
SNX30-202ENST00000416585 COL5A3P25940 1745 aaPredicted RBP15.57■□□□□ 0.08
SNX30-202ENST00000416585 PIGBQ92521 554 aa15.57■□□□□ 0.08
SNX30-202ENST00000416585 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
SNX30-202ENST00000416585 LOC102724428A0A0B4J2F2 783 aa15.56■□□□□ 0.08
SNX30-202ENST00000416585 PHKG2P15735 406 aa15.56■□□□□ 0.08
SNX30-202ENST00000416585 SIK1P57059 783 aa15.56■□□□□ 0.08
SNX30-202ENST00000416585 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
SNX30-202ENST00000416585 SCN11AQ9UI33 1791 aa15.55■□□□□ 0.08
SNX30-202ENST00000416585 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
SNX30-202ENST00000416585 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
SNX30-202ENST00000416585 SSFA2P28290 1259 aa15.55■□□□□ 0.08
SNX30-202ENST00000416585 ATP6V1AP38606 617 aa15.55■□□□□ 0.08
SNX30-202ENST00000416585 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
SNX30-202ENST00000416585 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
SNX30-202ENST00000416585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.54■□□□□ 0.08
SNX30-202ENST00000416585 GIGYF1O75420 1035 aaPredicted RBP15.54■□□□□ 0.08
SNX30-202ENST00000416585 PANK3Q9H999 370 aa15.54■□□□□ 0.08
SNX30-202ENST00000416585 KIF13BQ9NQT8 1826 aa15.54■□□□□ 0.08
SNX30-202ENST00000416585 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
SNX30-202ENST00000416585 GNPATO15228 680 aa15.53■□□□□ 0.08
SNX30-202ENST00000416585 PLEKHO1Q53GL0 409 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms