RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 STK38Q15208 465 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 METTL24Q5JXM2 366 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 TRIM5Q9C035 493 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 KCNH5Q8NCM2 988 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 ABCA10Q8WWZ4 1543 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 FCHSD2O94868 740 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 GPS2Q13227 327 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
COL12A1-203ENST00000416123 WWC2Q6AWC2 1192 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 CAGE1Q8TC20 777 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
COL12A1-203ENST00000416123 NAIPQ13075 1403 aa12.62□□□□□ -0.39
COL12A1-203ENST00000416123 TRAK2O60296 914 aa12.62□□□□□ -0.39
COL12A1-203ENST00000416123 USP5P45974 858 aa12.62□□□□□ -0.39
COL12A1-203ENST00000416123 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
COL12A1-203ENST00000416123 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
COL12A1-203ENST00000416123 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
COL12A1-203ENST00000416123 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
COL12A1-203ENST00000416123 ME1P48163 572 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 MPNDQ8N594 471 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 ADGRF5Q8IZF2 1346 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 F6X3S4 739 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 RABEP1Q15276 862 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
COL12A1-203ENST00000416123 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
COL12A1-203ENST00000416123 RUFY1Q96T51 708 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 ITSN2Q9NZM3 1697 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 FANCAO15360 1455 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 PDCP20941 246 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 FBLN1P23142 703 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 ABCC5O15440 1437 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 MNS1Q8NEH6 495 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 MINDY4BA8MYZ0 360 aa12.6□□□□□ -0.39
COL12A1-203ENST00000416123 UBAC1Q9BSL1 405 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 BOLA2Q9H3K6 86 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-203ENST00000416123 GPTP24298 496 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 SLC4A8Q2Y0W8 1093 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
COL12A1-203ENST00000416123 PDRG1Q9NUG6 133 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 IDI1Q13907 227 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
COL12A1-203ENST00000416123 ZNF652Q9Y2D9 606 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL12A1-203ENST00000416123 CHMP4BP1P59074 171 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 DDX11Q96FC9 970 aa12.59□□□□□ -0.39
COL12A1-203ENST00000416123 MCM2P49736 904 aa12.58□□□□□ -0.39
COL12A1-203ENST00000416123 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.4
COL12A1-203ENST00000416123 NOS1P29475 1434 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 ANKRD1Q15327 319 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-203ENST00000416123 AIDAQ96BJ3 306 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 RAPGEF6Q8TEU7 1601 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 C11orf95C9JLR9 678 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-203ENST00000416123 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
COL12A1-203ENST00000416123 SYCP1Q15431 976 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 ZNF76P36508 570 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
COL12A1-203ENST00000416123 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-203ENST00000416123 SERPINC1P01008 464 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-203ENST00000416123 K7ELQ4 463 aaPredicted RBP12.57□□□□□ -0.4
COL12A1-203ENST00000416123 CHRNA2Q15822 529 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 PAF1Q8N7H5 531 aa12.57□□□□□ -0.4
COL12A1-203ENST00000416123 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
COL12A1-203ENST00000416123 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-203ENST00000416123 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-203ENST00000416123 CCDC8Q9H0W5 538 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-203ENST00000416123 LETM1O95202 739 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-203ENST00000416123 BIVM-ERCC5R4GMW8 1640 aa12.56□□□□□ -0.4
COL12A1-203ENST00000416123 CAVIN4Q5BKX8 364 aa12.56□□□□□ -0.4
COL12A1-203ENST00000416123 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-203ENST00000416123 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
COL12A1-203ENST00000416123 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
COL12A1-203ENST00000416123 TRMT112Q9UI30 125 aaKnown RBP12.55□□□□□ -0.4
COL12A1-203ENST00000416123 RPGRQ92834 1020 aaKnown RBP12.55□□□□□ -0.4
COL12A1-203ENST00000416123 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
COL12A1-203ENST00000416123 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
COL12A1-203ENST00000416123 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
COL12A1-203ENST00000416123 IMMTQ16891 758 aaKnown RBP12.54□□□□□ -0.4
COL12A1-203ENST00000416123 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-203ENST00000416123 SSH1Q8WYL5 1049 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 SMARCE1Q969G3 411 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 AK7Q96M32 723 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
COL12A1-203ENST00000416123 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
COL12A1-203ENST00000416123 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
COL12A1-203ENST00000416123 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms