RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TFIP11Q9UBB9 837 aaKnown RBP15.35■□□□□ 0.05
SCN1B-202ENST00000415950 FYB1O15117 783 aa15.35■□□□□ 0.05
SCN1B-202ENST00000415950 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
SCN1B-202ENST00000415950 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
SCN1B-202ENST00000415950 NME9Q86XW9 330 aa15.34■□□□□ 0.05
SCN1B-202ENST00000415950 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
SCN1B-202ENST00000415950 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.05
SCN1B-202ENST00000415950 KRT24Q2M2I5 525 aa15.33■□□□□ 0.05
SCN1B-202ENST00000415950 H0YHG0 523 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 CCDC47Q96A33 483 aaKnown RBP15.33■□□□□ 0.04
SCN1B-202ENST00000415950 CHAMP1Q96JM3 812 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 NAT10Q9H0A0 1025 aaKnown RBP15.33■□□□□ 0.04
SCN1B-202ENST00000415950 PODXL2Q9NZ53 605 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 SPG7Q9UQ90 795 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 RPAP2Q8IXW5 612 aaPredicted RBP15.33■□□□□ 0.04
SCN1B-202ENST00000415950 CCDC112Q8NEF3 446 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
SCN1B-202ENST00000415950 CUL7Q14999 1698 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 ZBTB9Q96C00 473 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 C16orf45Q96MC5 204 aaPredicted RBP15.32■□□□□ 0.04
SCN1B-202ENST00000415950 CYP46A1Q9Y6A2 500 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 NUCB1Q02818 461 aa15.32■□□□□ 0.04
SCN1B-202ENST00000415950 THOC2Q8NI27 1593 aaKnown RBP15.31■□□□□ 0.04
SCN1B-202ENST00000415950 SDSP20132 328 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 ERICH2A1L162 156 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 CAGE1Q8TC20 777 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 TCEANC2Q96MN5 208 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 OFD1O75665 1012 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 KRT85P78386 507 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 HECW1Q76N89 1606 aa15.31■□□□□ 0.04
SCN1B-202ENST00000415950 ADCY5O95622 1261 aa15.3■□□□□ 0.04
SCN1B-202ENST00000415950 MEIS3Q99687 375 aa15.3■□□□□ 0.04
SCN1B-202ENST00000415950 TRMT1Q9NXH9 659 aaKnown RBP15.3■□□□□ 0.04
SCN1B-202ENST00000415950 MX1P20591 662 aa15.3■□□□□ 0.04
SCN1B-202ENST00000415950 EVA1CP58658 441 aa15.3■□□□□ 0.04
SCN1B-202ENST00000415950 PRPF40BQ6NWY9 871 aaKnown RBP15.3■□□□□ 0.04
SCN1B-202ENST00000415950 ME1P48163 572 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 PSMA5P28066 241 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 PSME1Q06323 249 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 AK7Q96M32 723 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 PDCP20941 246 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 STK38Q15208 465 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
SCN1B-202ENST00000415950 OTUD7AQ8TE49 926 aaPredicted RBP15.29■□□□□ 0.04
SCN1B-202ENST00000415950 ACBD3Q9H3P7 528 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
SCN1B-202ENST00000415950 SPATA32Q96LK8 384 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 NUP62CLQ9H1M0 184 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 PDRG1Q9NUG6 133 aa15.29■□□□□ 0.04
SCN1B-202ENST00000415950 TSC1Q92574 1164 aa15.28■□□□□ 0.04
SCN1B-202ENST00000415950 PPP4R3BQ5MIZ7 849 aa15.28■□□□□ 0.04
SCN1B-202ENST00000415950 AXDND1Q5T1B0 1012 aaPredicted RBP15.28■□□□□ 0.04
SCN1B-202ENST00000415950 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
SCN1B-202ENST00000415950 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
SCN1B-202ENST00000415950 C8orf58Q8NAV2 365 aa15.28■□□□□ 0.04
SCN1B-202ENST00000415950 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.04
SCN1B-202ENST00000415950 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
SCN1B-202ENST00000415950 GUCY1B3Q02153 619 aa15.27■□□□□ 0.04
SCN1B-202ENST00000415950 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.04
SCN1B-202ENST00000415950 ANXA1P04083 346 aa15.27■□□□□ 0.03
SCN1B-202ENST00000415950 AACSQ86V21 672 aa15.27■□□□□ 0.03
SCN1B-202ENST00000415950 GAS2L3Q86XJ1 694 aa15.27■□□□□ 0.03
SCN1B-202ENST00000415950 C17orf53Q8N3J3 647 aaPredicted RBP15.27■□□□□ 0.03
SCN1B-202ENST00000415950 NLRP2Q9NX02 1062 aa15.27■□□□□ 0.03
SCN1B-202ENST00000415950 TSPYL1Q9H0U9 437 aa15.27■□□□□ 0.03
SCN1B-202ENST00000415950 LETM1O95202 739 aaPredicted RBP15.26■□□□□ 0.03
SCN1B-202ENST00000415950 RAB3GAP1Q15042 981 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 RRP12Q5JTH9 1297 aaKnown RBP15.26■□□□□ 0.03
SCN1B-202ENST00000415950 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
SCN1B-202ENST00000415950 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 BLOC1S2Q6QNY1 142 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 ATAD2Q6PL18 1390 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
SCN1B-202ENST00000415950 SERPINC1P01008 464 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 FAM69CQ0P6D2 419 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 RAPGEF4Q8WZA2 1011 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
SCN1B-202ENST00000415950 ZBTB40Q9NUA8 1239 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 CGNQ9P2M7 1197 aaKnown RBP15.25■□□□□ 0.03
SCN1B-202ENST00000415950 NECAB1Q8N987 351 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 BOLA2Q9H3K6 86 aa15.25■□□□□ 0.03
SCN1B-202ENST00000415950 MYL6BP14649 208 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
SCN1B-202ENST00000415950 MAP3K11Q16584 847 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 CT47A1Q5JQC4 288 aaPredicted RBP15.24■□□□□ 0.03
SCN1B-202ENST00000415950 SMC5Q8IY18 1101 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 AMOTL1Q8IY63 956 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.24■□□□□ 0.03
SCN1B-202ENST00000415950 V9GYY5 206 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms