RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 CCP110O43303 1012 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 ATICP31939 592 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 ITGAEP38570 1179 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 DRC7Q8IY82 874 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 SAMD3Q8N6K7 520 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
CLIP4-205ENST00000415891 ZNF16P17020 682 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-205ENST00000415891 ZNF394Q53GI3 561 aa8.11□□□□□ -1.11
CLIP4-205ENST00000415891 DNAJC21Q5F1R6 531 aaKnown RBP8.11□□□□□ -1.11
CLIP4-205ENST00000415891 EFCAB2Q5VUJ9 269 aa8.11□□□□□ -1.11
CLIP4-205ENST00000415891 SLX1AQ9BQ83 275 aa8.11□□□□□ -1.11
CLIP4-205ENST00000415891 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
CLIP4-205ENST00000415891 TMA7Q9Y2S6 64 aaKnown RBP8.11□□□□□ -1.11
CLIP4-205ENST00000415891 ANKRD18BA2A2Z9 1011 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 ABL2P42684 1182 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC73Q6ZRK6 1079 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 SMCR8Q8TEV9 937 aaPredicted RBP8.1□□□□□ -1.11
CLIP4-205ENST00000415891 TAF4BQ92750 862 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 NOL10Q9BSC4 688 aaKnown RBP8.1□□□□□ -1.11
CLIP4-205ENST00000415891 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
CLIP4-205ENST00000415891 SFMBT1Q9UHJ3 866 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 RABL2BQ9UNT1 228 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 AKAP2Q9Y2D5 859 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 TRIM64CA6NLI5 447 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 HIP1RO75146 1068 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 CD53P19397 219 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 INHBEP58166 350 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 NT5DC4Q86YG4 428 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
CLIP4-205ENST00000415891 ODF2LQ9ULJ1 636 aa8.1□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC175P0C221 793 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 PDE6BP35913 854 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 FAM161AQ3B820 660 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 NOP9Q86U38 636 aaKnown RBP8.09□□□□□ -1.11
CLIP4-205ENST00000415891 IL17RAQ96F46 866 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 AK7Q96M32 723 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 THRAP3Q9Y2W1 955 aaKnown RBP8.09□□□□□ -1.11
CLIP4-205ENST00000415891 RB1CC1Q8TDY2 1594 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 TLDC2A0PJX2 215 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC66A2RUB6 948 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
CLIP4-205ENST00000415891 MTA2O94776 668 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 TPPPO94811 219 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 ECEL1O95672 775 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 LDHCP07864 332 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 RIPK4P57078 832 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 MCM6Q14566 821 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 KCTD2Q14681 263 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC174Q6PII3 467 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 TIGD1Q96MW7 591 aa8.09□□□□□ -1.11
CLIP4-205ENST00000415891 PPFIA2O75334 1257 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 DSG3P32926 999 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 ZNF132P52740 706 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 LONRF1Q17RB8 773 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 UBE2Q1Q7Z7E8 422 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 LMNTD2Q8IXW0 634 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 EPAS1Q99814 870 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 H0YHG0 523 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 HTATSF1O43719 755 aaKnown RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 CLK1P49759 484 aaKnown RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 SARNPP82979 210 aaKnown RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 SOGA3Q5TF21 947 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 DUSP9Q99956 384 aaKnown RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 LNPKQ9C0E8 428 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 RWDD1Q9H446 243 aaPredicted RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 GOPCQ9HD26 462 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 TMEM63CQ9P1W3 806 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 SUFUQ9UMX1 484 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 NOL7Q9UMY1 257 aaKnown RBP8.08□□□□□ -1.12
CLIP4-205ENST00000415891 KIF3AQ9Y496 699 aa8.08□□□□□ -1.12
CLIP4-205ENST00000415891 CCDC196A0A1B0GTZ2 297 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 GOLGA6L22H0YM25 854 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 OATP04181 439 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 FOSL1P15407 271 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 GUCY2CP25092 1073 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 MAN1A1P33908 653 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 TRDNQ13061 729 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 ZSCAN26Q16670 478 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 ELOA2Q8IYF1 753 aaPredicted RBP8.07□□□□□ -1.12
CLIP4-205ENST00000415891 FAM184AQ8NB25 1140 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 SPC25Q9HBM1 224 aa8.07□□□□□ -1.12
CLIP4-205ENST00000415891 CAND2O75155 1236 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 NOP2P46087 812 aaKnown RBP8.06□□□□□ -1.12
CLIP4-205ENST00000415891 PTK7Q13308 1070 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 CDC37L1Q7L3B6 337 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 OTUD6AQ7L8S5 288 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 MYO1HQ8N1T3 1032 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 NLGN1Q8N2Q7 840 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 ALDH8A1Q9H2A2 487 aaPredicted RBP8.06□□□□□ -1.12
CLIP4-205ENST00000415891 PCDHGA4Q9Y5G9 962 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 WASHC5Q12768 1159 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 BMS1Q14692 1282 aaKnown RBP8.06□□□□□ -1.12
CLIP4-205ENST00000415891 PLEKHG6Q3KR16 790 aa8.06□□□□□ -1.12
CLIP4-205ENST00000415891 ALDH1L2Q3SY69 923 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms