RNA–Protein interactions for RNA: ENST00000415824.1

AP001043.1-203, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-203ENST00000415824 COL13A1Q5TAT6 717 aaPredicted RBP10.65□□□□□ -0.7
AP001043.1-203ENST00000415824 ZNF526Q8TF50 670 aaPredicted RBP10.64□□□□□ -0.71
AP001043.1-203ENST00000415824 KIF13BQ9NQT8 1826 aa10.63□□□□□ -0.71
AP001043.1-203ENST00000415824 NBPF1Q3BBV0 1214 aa10.63□□□□□ -0.71
AP001043.1-203ENST00000415824 NLRP2Q9NX02 1062 aa10.63□□□□□ -0.71
AP001043.1-203ENST00000415824 TOGARAM1Q9Y4F4 1720 aa10.63□□□□□ -0.71
AP001043.1-203ENST00000415824 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
AP001043.1-203ENST00000415824 KIAA1551Q9HCM1 1747 aa10.62□□□□□ -0.71
AP001043.1-203ENST00000415824 HMGB2P26583 209 aaKnown RBP10.62□□□□□ -0.71
AP001043.1-203ENST00000415824 KCNQ4P56696 695 aa10.62□□□□□ -0.71
AP001043.1-203ENST00000415824 FLAD1Q8NFF5 587 aa10.62□□□□□ -0.71
AP001043.1-203ENST00000415824 KLRG1Q96E93 195 aa10.62□□□□□ -0.71
AP001043.1-203ENST00000415824 UBR3Q6ZT12 1888 aa10.61□□□□□ -0.71
AP001043.1-203ENST00000415824 PRIM1P49642 420 aaKnown RBP10.61□□□□□ -0.71
AP001043.1-203ENST00000415824 ANKRD24Q8TF21 1146 aa10.61□□□□□ -0.71
AP001043.1-203ENST00000415824 CCNL1Q9UK58 526 aaPredicted RBP10.61□□□□□ -0.71
AP001043.1-203ENST00000415824 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
AP001043.1-203ENST00000415824 IGSF1Q8N6C5 1336 aa10.6□□□□□ -0.71
AP001043.1-203ENST00000415824 SLC34A2O95436 690 aa10.6□□□□□ -0.71
AP001043.1-203ENST00000415824 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
AP001043.1-203ENST00000415824 C10orf71Q711Q0 1435 aa10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 C4BP0C0L5 1744 aa10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 SOX12O15370 315 aa10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 TNS4Q8IZW8 715 aa10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
AP001043.1-203ENST00000415824 CD163L1Q9NR16 1453 aa10.58□□□□□ -0.72
AP001043.1-203ENST00000415824 KTN1Q86UP2 1357 aaKnown RBP10.58□□□□□ -0.72
AP001043.1-203ENST00000415824 SBNO2Q9Y2G9 1366 aa10.58□□□□□ -0.72
AP001043.1-203ENST00000415824 USP47Q96K76 1375 aa10.57□□□□□ -0.72
AP001043.1-203ENST00000415824 FSTL1Q12841 308 aa10.57□□□□□ -0.72
AP001043.1-203ENST00000415824 DDX54Q8TDD1 881 aaKnown RBP10.57□□□□□ -0.72
AP001043.1-203ENST00000415824 NSD3Q9BZ95 1437 aa10.57□□□□□ -0.72
AP001043.1-203ENST00000415824 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
AP001043.1-203ENST00000415824 MSH5O43196 834 aa10.56□□□□□ -0.72
AP001043.1-203ENST00000415824 IP6K1Q92551 441 aa10.56□□□□□ -0.72
AP001043.1-203ENST00000415824 RGPD2P0DJD1 1756 aa10.56□□□□□ -0.72
AP001043.1-203ENST00000415824 ARFGEF1Q9Y6D6 1849 aa10.56□□□□□ -0.72
AP001043.1-203ENST00000415824 PKD1L3Q7Z443 1732 aa10.55□□□□□ -0.72
AP001043.1-203ENST00000415824 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
AP001043.1-203ENST00000415824 MEGF6O75095 1541 aa10.55□□□□□ -0.72
AP001043.1-203ENST00000415824 ZCRB1Q8TBF4 217 aaKnown RBP10.55□□□□□ -0.72
AP001043.1-203ENST00000415824 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
AP001043.1-203ENST00000415824 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 CAPN15O75808 1086 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 AMIGO3Q86WK7 504 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 ITGB4P16144 1822 aa10.54□□□□□ -0.72
AP001043.1-203ENST00000415824 EDC4Q6P2E9 1401 aaKnown RBP10.53□□□□□ -0.72
AP001043.1-203ENST00000415824 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
AP001043.1-203ENST00000415824 NME9Q86XW9 330 aa10.53□□□□□ -0.72
AP001043.1-203ENST00000415824 PALLDQ8WX93 1383 aa10.52□□□□□ -0.72
AP001043.1-203ENST00000415824 SSFA2P28290 1259 aa10.52□□□□□ -0.73
AP001043.1-203ENST00000415824 HTRA3P83110 453 aa10.52□□□□□ -0.73
AP001043.1-203ENST00000415824 TGFB2P61812 414 aa10.51□□□□□ -0.73
AP001043.1-203ENST00000415824 SBF1O95248 1867 aa10.51□□□□□ -0.73
AP001043.1-203ENST00000415824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.5□□□□□ -0.73
AP001043.1-203ENST00000415824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
AP001043.1-203ENST00000415824 WWC3Q9ULE0 1092 aa10.5□□□□□ -0.73
AP001043.1-203ENST00000415824 AK7Q96M32 723 aa10.49□□□□□ -0.73
AP001043.1-203ENST00000415824 PCGF6Q9BYE7 350 aa10.49□□□□□ -0.73
AP001043.1-203ENST00000415824 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
AP001043.1-203ENST00000415824 RTL1A6NKG5 1358 aa10.49□□□□□ -0.73
AP001043.1-203ENST00000415824 ZNF831Q5JPB2 1677 aa10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 HSPA1AP0DMV8 641 aaKnown RBP10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 HSPA1BP0DMV9 641 aaKnown RBP10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 HOXC9P31274 260 aa10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
AP001043.1-203ENST00000415824 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
AP001043.1-203ENST00000415824 C16orf71Q8IYS4 520 aaPredicted RBP10.47□□□□□ -0.73
AP001043.1-203ENST00000415824 MAP3K19Q56UN5 1328 aa10.47□□□□□ -0.73
AP001043.1-203ENST00000415824 MMP10P09238 476 aa10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 SMC1BQ8NDV3 1235 aa10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 PUS7Q96PZ0 661 aaKnown RBP10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 PCDH11XQ9BZA7 1347 aa10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 PCDH11YQ9BZA8 1340 aa10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 ZC3H4Q9UPT8 1303 aaKnown RBP10.46□□□□□ -0.73
AP001043.1-203ENST00000415824 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
AP001043.1-203ENST00000415824 TNRC18O15417 2968 aaPredicted RBP10.46□□□□□ -0.74
AP001043.1-203ENST00000415824 KDM6AO15550 1401 aaPredicted RBP10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 KCNA3P22001 575 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 C9orf131Q5VYM1 1079 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 ARHGAP27Q6ZUM4 889 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 HDGFL2Q7Z4V5 671 aaPredicted RBP10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
AP001043.1-203ENST00000415824 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
AP001043.1-203ENST00000415824 A0A0G2JLW4 131 aa10.44□□□□□ -0.74
AP001043.1-203ENST00000415824 PHF14O94880 888 aa10.44□□□□□ -0.74
AP001043.1-203ENST00000415824 NKX1-1Q15270 411 aaPredicted RBP10.44□□□□□ -0.74
AP001043.1-203ENST00000415824 LINC00116Q8NCU8 138 aa10.44□□□□□ -0.74
AP001043.1-203ENST00000415824 LOC102724428A0A0B4J2F2 783 aa10.43□□□□□ -0.74
AP001043.1-203ENST00000415824 CYP27B1O15528 508 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms