RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 NALCNQ8IZF0 1738 aa18.29■□□□□ 0.52
PRKD1-202ENST00000415220 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
PRKD1-202ENST00000415220 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
PRKD1-202ENST00000415220 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
PRKD1-202ENST00000415220 MEIS3Q99687 375 aa18.28■□□□□ 0.52
PRKD1-202ENST00000415220 RGPD8O14715 1765 aaPredicted RBP18.28■□□□□ 0.52
PRKD1-202ENST00000415220 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
PRKD1-202ENST00000415220 HDGFP51858 240 aaKnown RBP18.28■□□□□ 0.52
PRKD1-202ENST00000415220 SNX21Q969T3 373 aa18.28■□□□□ 0.52
PRKD1-202ENST00000415220 DCTPP1Q9H773 170 aa18.28■□□□□ 0.52
PRKD1-202ENST00000415220 CRB1P82279 1406 aa18.27■□□□□ 0.52
PRKD1-202ENST00000415220 MTHFSDQ2M296 383 aaKnown RBP18.27■□□□□ 0.51
PRKD1-202ENST00000415220 G2E3Q7L622 706 aa18.27■□□□□ 0.51
PRKD1-202ENST00000415220 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.51
PRKD1-202ENST00000415220 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
PRKD1-202ENST00000415220 TRAK2O60296 914 aa18.26■□□□□ 0.51
PRKD1-202ENST00000415220 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
PRKD1-202ENST00000415220 SSH2Q76I76 1423 aa18.25■□□□□ 0.51
PRKD1-202ENST00000415220 F6X3S4 739 aa18.25■□□□□ 0.51
PRKD1-202ENST00000415220 SLC4A2P04920 1241 aa18.25■□□□□ 0.51
PRKD1-202ENST00000415220 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
PRKD1-202ENST00000415220 RTL1A6NKG5 1358 aa18.25■□□□□ 0.51
PRKD1-202ENST00000415220 CEP170BQ9Y4F5 1589 aaPredicted RBP18.24■□□□□ 0.51
PRKD1-202ENST00000415220 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
PRKD1-202ENST00000415220 PANK2Q9BZ23 570 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 CDC45O75419 566 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.24■□□□□ 0.51
PRKD1-202ENST00000415220 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
PRKD1-202ENST00000415220 TTC22Q5TAA0 569 aa18.23■□□□□ 0.51
PRKD1-202ENST00000415220 XRCC6P12956 609 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRKD1-202ENST00000415220 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
PRKD1-202ENST00000415220 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
PRKD1-202ENST00000415220 KIF24Q5T7B8 1368 aa18.22■□□□□ 0.51
PRKD1-202ENST00000415220 SLC4A10Q6U841 1118 aa18.22■□□□□ 0.51
PRKD1-202ENST00000415220 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
PRKD1-202ENST00000415220 EYA1Q99502 592 aa18.21■□□□□ 0.51
PRKD1-202ENST00000415220 FSD2A1L4K1 749 aa18.2■□□□□ 0.5
PRKD1-202ENST00000415220 AK9Q5TCS8 1911 aa18.2■□□□□ 0.5
PRKD1-202ENST00000415220 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
PRKD1-202ENST00000415220 TSPYL4Q9UJ04 414 aa18.2■□□□□ 0.5
PRKD1-202ENST00000415220 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
PRKD1-202ENST00000415220 PIK3C2AO00443 1686 aa18.19■□□□□ 0.5
PRKD1-202ENST00000415220 SDSP20132 328 aa18.19■□□□□ 0.5
PRKD1-202ENST00000415220 RAB3GAP1Q15042 981 aa18.18■□□□□ 0.5
PRKD1-202ENST00000415220 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
PRKD1-202ENST00000415220 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
PRKD1-202ENST00000415220 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
PRKD1-202ENST00000415220 PTPRCP08575 1304 aa18.18■□□□□ 0.5
PRKD1-202ENST00000415220 TSHZ3Q63HK5 1081 aa18.18■□□□□ 0.5
PRKD1-202ENST00000415220 RPAP2Q8IXW5 612 aaPredicted RBP18.17■□□□□ 0.5
PRKD1-202ENST00000415220 DIP2AQ14689 1571 aa18.17■□□□□ 0.5
PRKD1-202ENST00000415220 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
PRKD1-202ENST00000415220 SSFA2P28290 1259 aa18.17■□□□□ 0.5
PRKD1-202ENST00000415220 AMPHP49418 695 aa18.16■□□□□ 0.5
PRKD1-202ENST00000415220 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
PRKD1-202ENST00000415220 RRAGDQ9NQL2 400 aaPredicted RBP18.16■□□□□ 0.5
PRKD1-202ENST00000415220 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
PRKD1-202ENST00000415220 FLT4P35916 1363 aa18.16■□□□□ 0.5
PRKD1-202ENST00000415220 RTF1Q92541 710 aaKnown RBP18.16■□□□□ 0.5
PRKD1-202ENST00000415220 USP26Q9BXU7 913 aa18.16■□□□□ 0.5
PRKD1-202ENST00000415220 KDRP35968 1356 aa18.15■□□□□ 0.5
PRKD1-202ENST00000415220 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
PRKD1-202ENST00000415220 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
PRKD1-202ENST00000415220 LTV1Q96GA3 475 aaPredicted RBP18.14■□□□□ 0.49
PRKD1-202ENST00000415220 EXOC6BQ9Y2D4 811 aa18.14■□□□□ 0.49
PRKD1-202ENST00000415220 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
PRKD1-202ENST00000415220 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
PRKD1-202ENST00000415220 TTC21AQ8NDW8 1320 aa18.13■□□□□ 0.49
PRKD1-202ENST00000415220 NLRP6P59044 892 aa18.13■□□□□ 0.49
PRKD1-202ENST00000415220 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
PRKD1-202ENST00000415220 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
PRKD1-202ENST00000415220 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
PRKD1-202ENST00000415220 PKP1Q13835 747 aa18.12■□□□□ 0.49
PRKD1-202ENST00000415220 CIZ1Q9ULV3 898 aaPredicted RBP18.12■□□□□ 0.49
PRKD1-202ENST00000415220 RBM33Q96EV2 1170 aaKnown RBP18.11■□□□□ 0.49
PRKD1-202ENST00000415220 NWD1Q149M9 1564 aa18.1■□□□□ 0.49
PRKD1-202ENST00000415220 PNMA6EA0A0J9YXQ4 647 aa18.1■□□□□ 0.49
PRKD1-202ENST00000415220 FAM208AQ9UK61 1670 aaKnown RBP18.1■□□□□ 0.49
PRKD1-202ENST00000415220 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
PRKD1-202ENST00000415220 KCNA6P17658 529 aa18.1■□□□□ 0.49
PRKD1-202ENST00000415220 HOXC9P31274 260 aa18.1■□□□□ 0.49
PRKD1-202ENST00000415220 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
PRKD1-202ENST00000415220 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
PRKD1-202ENST00000415220 SLIT1O75093 1534 aa18.09■□□□□ 0.49
PRKD1-202ENST00000415220 LRRC37A3O60309 1634 aa18.09■□□□□ 0.49
PRKD1-202ENST00000415220 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
PRKD1-202ENST00000415220 FLIIQ13045 1269 aa18.08■□□□□ 0.49
PRKD1-202ENST00000415220 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.49
PRKD1-202ENST00000415220 PDE1AP54750 535 aa18.08■□□□□ 0.48
PRKD1-202ENST00000415220 FKBP5Q13451 457 aaPredicted RBP18.08■□□□□ 0.48
PRKD1-202ENST00000415220 RABEP1Q15276 862 aa18.08■□□□□ 0.48
PRKD1-202ENST00000415220 GBP4Q96PP9 640 aa18.08■□□□□ 0.48
PRKD1-202ENST00000415220 CCT4P50991 539 aaKnown RBP18.07■□□□□ 0.48
PRKD1-202ENST00000415220 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
PRKD1-202ENST00000415220 GRPEL1Q9HAV7 217 aa18.07■□□□□ 0.48
PRKD1-202ENST00000415220 CHAMP1Q96JM3 812 aa18.07■□□□□ 0.48
PRKD1-202ENST00000415220 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms