RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 FIGNL2A6NMB9 653 aa11.5□□□□□ -0.57
ATG4C-204ENST00000414558 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
ATG4C-204ENST00000414558 LCE2AQ5TA79 106 aaPredicted RBP11.5□□□□□ -0.57
ATG4C-204ENST00000414558 PHTF2Q8N3S3 785 aa11.5□□□□□ -0.57
ATG4C-204ENST00000414558 DOLKQ9UPQ8 538 aa11.5□□□□□ -0.57
ATG4C-204ENST00000414558 H3BM21 787 aa11.48□□□□□ -0.57
ATG4C-204ENST00000414558 TRAK2O60296 914 aa11.48□□□□□ -0.57
ATG4C-204ENST00000414558 OSBPL3Q9H4L5 887 aa11.48□□□□□ -0.57
ATG4C-204ENST00000414558 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
ATG4C-204ENST00000414558 CDCA7Q9BWT1 371 aaPredicted RBP11.47□□□□□ -0.57
ATG4C-204ENST00000414558 USP4Q13107 963 aa11.46□□□□□ -0.57
ATG4C-204ENST00000414558 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
ATG4C-204ENST00000414558 A0A1W2PRU2 124 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 VEGFBP49765 207 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 MAP7D1Q3KQU3 841 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 FOXD4L5Q5VV16 416 aaPredicted RBP11.45□□□□□ -0.58
ATG4C-204ENST00000414558 IRF7Q92985 503 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 ALG2Q9H553 416 aa11.45□□□□□ -0.58
ATG4C-204ENST00000414558 MEN1O00255 615 aa11.44□□□□□ -0.58
ATG4C-204ENST00000414558 GPC1P35052 558 aa11.44□□□□□ -0.58
ATG4C-204ENST00000414558 RNF144AP50876 292 aaPredicted RBP11.44□□□□□ -0.58
ATG4C-204ENST00000414558 PTSQ03393 145 aa11.44□□□□□ -0.58
ATG4C-204ENST00000414558 GNRH1P01148 92 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 CLN3Q13286 438 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 ARHGEF10LQ9HCE6 1279 aa11.43□□□□□ -0.58
ATG4C-204ENST00000414558 PPFIA3O75145 1194 aa11.42□□□□□ -0.58
ATG4C-204ENST00000414558 LYSMD3Q7Z3D4 306 aa11.42□□□□□ -0.58
ATG4C-204ENST00000414558 PLPP7Q8NBV4 271 aa11.42□□□□□ -0.58
ATG4C-204ENST00000414558 CLUAP1Q96AJ1 413 aa11.41□□□□□ -0.58
ATG4C-204ENST00000414558 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
ATG4C-204ENST00000414558 POM121CA8CG34 1229 aa11.39□□□□□ -0.59
ATG4C-204ENST00000414558 WIPF1O43516 503 aa11.39□□□□□ -0.59
ATG4C-204ENST00000414558 LCE2CQ5TA81 110 aa11.39□□□□□ -0.59
ATG4C-204ENST00000414558 NFATC2IPQ8NCF5 419 aa11.39□□□□□ -0.59
ATG4C-204ENST00000414558 SLC35F4A4IF30 521 aa11.38□□□□□ -0.59
ATG4C-204ENST00000414558 ESCO1Q5FWF5 840 aa11.38□□□□□ -0.59
ATG4C-204ENST00000414558 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
ATG4C-204ENST00000414558 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
ATG4C-204ENST00000414558 RAB6BQ9NRW1 208 aa11.38□□□□□ -0.59
ATG4C-204ENST00000414558 PIK3CDO00329 1044 aa11.37□□□□□ -0.59
ATG4C-204ENST00000414558 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
ATG4C-204ENST00000414558 PRICKLE2Q7Z3G6 844 aa11.37□□□□□ -0.59
ATG4C-204ENST00000414558 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
ATG4C-204ENST00000414558 ERBB4Q15303 1308 aa11.36□□□□□ -0.59
ATG4C-204ENST00000414558 A6NJR5 290 aa11.36□□□□□ -0.59
ATG4C-204ENST00000414558 SKIP12755 728 aa11.36□□□□□ -0.59
ATG4C-204ENST00000414558 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
ATG4C-204ENST00000414558 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
ATG4C-204ENST00000414558 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
ATG4C-204ENST00000414558 IL2RAP01589 272 aa11.35□□□□□ -0.59
ATG4C-204ENST00000414558 EML3Q32P44 896 aa11.34□□□□□ -0.59
ATG4C-204ENST00000414558 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
ATG4C-204ENST00000414558 ADAMTS19Q8TE59 1207 aa11.34□□□□□ -0.59
ATG4C-204ENST00000414558 GRIP2Q9C0E4 1043 aa11.34□□□□□ -0.59
ATG4C-204ENST00000414558 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
ATG4C-204ENST00000414558 RHOQP17081 205 aa11.33□□□□□ -0.6
ATG4C-204ENST00000414558 GMPRP36959 345 aa11.33□□□□□ -0.6
ATG4C-204ENST00000414558 XAGE2Q96GT9 111 aa11.33□□□□□ -0.6
ATG4C-204ENST00000414558 ITGA6P23229 1130 aa11.32□□□□□ -0.6
ATG4C-204ENST00000414558 CENPCQ03188 943 aa11.32□□□□□ -0.6
ATG4C-204ENST00000414558 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
ATG4C-204ENST00000414558 INSM1Q01101 510 aaPredicted RBP11.31□□□□□ -0.6
ATG4C-204ENST00000414558 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
ATG4C-204ENST00000414558 NOD1Q9Y239 953 aa11.31□□□□□ -0.6
ATG4C-204ENST00000414558 HRH3Q9Y5N1 445 aa11.31□□□□□ -0.6
ATG4C-204ENST00000414558 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
ATG4C-204ENST00000414558 GTF2E1P29083 439 aaPredicted RBP11.3□□□□□ -0.6
ATG4C-204ENST00000414558 POU4F2Q12837 409 aa11.3□□□□□ -0.6
ATG4C-204ENST00000414558 WDR44Q5JSH3 913 aa11.3□□□□□ -0.6
ATG4C-204ENST00000414558 NANOS1Q8WY41 292 aaKnown RBP11.3□□□□□ -0.6
ATG4C-204ENST00000414558 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
ATG4C-204ENST00000414558 GDF10P55107 478 aa11.29□□□□□ -0.6
ATG4C-204ENST00000414558 NCOA4Q13772 614 aa11.29□□□□□ -0.6
ATG4C-204ENST00000414558 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
ATG4C-204ENST00000414558 TAS1R3Q7RTX0 852 aa11.29□□□□□ -0.6
ATG4C-204ENST00000414558 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
ATG4C-204ENST00000414558 GLMNQ92990 594 aa11.29□□□□□ -0.6
ATG4C-204ENST00000414558 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
ATG4C-204ENST00000414558 SCNN1DP51172 638 aa11.28□□□□□ -0.6
ATG4C-204ENST00000414558 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
ATG4C-204ENST00000414558 FHDC1Q9C0D6 1143 aaPredicted RBP11.28□□□□□ -0.6
ATG4C-204ENST00000414558 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
ATG4C-204ENST00000414558 STAU1O95793 577 aaKnown RBP11.27□□□□□ -0.61
ATG4C-204ENST00000414558 INHAP05111 366 aa11.27□□□□□ -0.61
ATG4C-204ENST00000414558 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
ATG4C-204ENST00000414558 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
ATG4C-204ENST00000414558 CDC14CA4D256 554 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 ATP9BO43861 1147 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 TLR1Q15399 786 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 TMEM214Q6NUQ4 689 aaKnown RBP11.26□□□□□ -0.61
ATG4C-204ENST00000414558 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 DEPDC4Q8N2C3 294 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 PCDHGA11Q9Y5H2 935 aa11.26□□□□□ -0.61
ATG4C-204ENST00000414558 USP17L3A6NCW0 530 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms