RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 MARCH10Q8NA82 808 aaPredicted RBP22.12■■□□□ 1.13
LINC00398-201ENST00000414407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.13
LINC00398-201ENST00000414407 NUDCQ9Y266 331 aa22.12■■□□□ 1.13
LINC00398-201ENST00000414407 SULT6B1Q6IMI4 303 aa22.11■■□□□ 1.13
LINC00398-201ENST00000414407 CCDC125Q86Z20 511 aa22.1■■□□□ 1.13
LINC00398-201ENST00000414407 FAM182BQ5T319 152 aa22.09■■□□□ 1.13
LINC00398-201ENST00000414407 UPF1Q92900 1129 aaKnown RBP eCLIP22.09■■□□□ 1.13
LINC00398-201ENST00000414407 AEBP1Q8IUX7 1158 aa22.08■■□□□ 1.13
LINC00398-201ENST00000414407 SPG7Q9UQ90 795 aa22.08■■□□□ 1.13
LINC00398-201ENST00000414407 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
LINC00398-201ENST00000414407 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
LINC00398-201ENST00000414407 EP400Q96L91 3159 aa22.07■■□□□ 1.12
LINC00398-201ENST00000414407 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
LINC00398-201ENST00000414407 ANP32CO43423 234 aa22.07■■□□□ 1.12
LINC00398-201ENST00000414407 AMOTQ4VCS5 1084 aa22.06■■□□□ 1.12
LINC00398-201ENST00000414407 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
LINC00398-201ENST00000414407 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
LINC00398-201ENST00000414407 PLEKHO1Q53GL0 409 aaPredicted RBP22.04■■□□□ 1.12
LINC00398-201ENST00000414407 SHANK3Q9BYB0 1731 aa22.03■■□□□ 1.12
LINC00398-201ENST00000414407 HMOX1P09601 288 aa22.03■■□□□ 1.12
LINC00398-201ENST00000414407 CYP27B1O15528 508 aa22.02■■□□□ 1.12
LINC00398-201ENST00000414407 FCHSD2O94868 740 aa22.02■■□□□ 1.12
LINC00398-201ENST00000414407 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
LINC00398-201ENST00000414407 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
LINC00398-201ENST00000414407 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
LINC00398-201ENST00000414407 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
LINC00398-201ENST00000414407 IFNL2Q8IZJ0 200 aa22■■□□□ 1.11
LINC00398-201ENST00000414407 TRIM37O94972 964 aa21.99■■□□□ 1.11
LINC00398-201ENST00000414407 RSPH6AQ9H0K4 717 aa21.99■■□□□ 1.11
LINC00398-201ENST00000414407 PHKG2P15735 406 aa21.98■■□□□ 1.11
LINC00398-201ENST00000414407 BCL11BQ9C0K0 894 aaPredicted RBP21.98■■□□□ 1.11
LINC00398-201ENST00000414407 HSP90AB1P08238 724 aaKnown RBP21.96■■□□□ 1.11
LINC00398-201ENST00000414407 PRKAR2BP31323 418 aa21.96■■□□□ 1.11
LINC00398-201ENST00000414407 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
LINC00398-201ENST00000414407 PNNQ9H307 717 aaKnown RBP21.96■■□□□ 1.11
LINC00398-201ENST00000414407 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
LINC00398-201ENST00000414407 AKAP4Q5JQC9 854 aa21.94■■□□□ 1.1
LINC00398-201ENST00000414407 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
LINC00398-201ENST00000414407 BAG6P46379 1132 aa21.93■■□□□ 1.1
LINC00398-201ENST00000414407 MTHFSDQ2M296 383 aaKnown RBP21.93■■□□□ 1.1
LINC00398-201ENST00000414407 NHSQ6T4R5 1651 aa21.93■■□□□ 1.1
LINC00398-201ENST00000414407 GAS2L2Q8NHY3 880 aa21.93■■□□□ 1.1
LINC00398-201ENST00000414407 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
LINC00398-201ENST00000414407 DCAF5Q96JK2 942 aa21.93■■□□□ 1.1
LINC00398-201ENST00000414407 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
LINC00398-201ENST00000414407 KCNQ2O43526 872 aa21.92■■□□□ 1.1
LINC00398-201ENST00000414407 APBA3O96018 575 aa21.91■■□□□ 1.1
LINC00398-201ENST00000414407 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
LINC00398-201ENST00000414407 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
LINC00398-201ENST00000414407 PHACTR3Q96KR7 559 aa21.91■■□□□ 1.1
LINC00398-201ENST00000414407 PLSCR1O15162 318 aa21.9■■□□□ 1.1
LINC00398-201ENST00000414407 NEFMP07197 916 aa21.9■■□□□ 1.1
LINC00398-201ENST00000414407 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
LINC00398-201ENST00000414407 PTF1AQ7RTS3 328 aa21.89■■□□□ 1.09
LINC00398-201ENST00000414407 DOT1LQ8TEK3 1739 aa21.89■■□□□ 1.09
LINC00398-201ENST00000414407 ERVV-2B6SEH9 535 aa21.88■■□□□ 1.09
LINC00398-201ENST00000414407 DEFB132Q7Z7B7 95 aa21.87■■□□□ 1.09
LINC00398-201ENST00000414407 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
LINC00398-201ENST00000414407 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
LINC00398-201ENST00000414407 CAMKK2Q96RR4 588 aa21.86■■□□□ 1.09
LINC00398-201ENST00000414407 MRS2Q9HD23 443 aa21.86■■□□□ 1.09
LINC00398-201ENST00000414407 ADAMTS8Q9UP79 889 aa21.86■■□□□ 1.09
LINC00398-201ENST00000414407 KDM6AO15550 1401 aaPredicted RBP21.86■■□□□ 1.09
LINC00398-201ENST00000414407 GNAT3A8MTJ3 354 aa21.85■■□□□ 1.09
LINC00398-201ENST00000414407 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
LINC00398-201ENST00000414407 TOGARAM1Q9Y4F4 1720 aa21.85■■□□□ 1.09
LINC00398-201ENST00000414407 MAP3K5Q99683 1374 aa21.85■■□□□ 1.09
LINC00398-201ENST00000414407 MAPK8IP3Q9UPT6 1336 aa21.84■■□□□ 1.09
LINC00398-201ENST00000414407 EN1Q05925 392 aaPredicted RBP21.84■■□□□ 1.09
LINC00398-201ENST00000414407 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
LINC00398-201ENST00000414407 RGPD3A6NKT7 1758 aaPredicted RBP21.84■■□□□ 1.09
LINC00398-201ENST00000414407 RGPD4Q7Z3J3 1758 aa21.84■■□□□ 1.09
LINC00398-201ENST00000414407 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
LINC00398-201ENST00000414407 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
LINC00398-201ENST00000414407 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.08
LINC00398-201ENST00000414407 BTAF1O14981 1849 aa21.83■■□□□ 1.08
LINC00398-201ENST00000414407 RNMTO43148 476 aaKnown RBP21.82■■□□□ 1.08
LINC00398-201ENST00000414407 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
LINC00398-201ENST00000414407 PIGBQ92521 554 aa21.82■■□□□ 1.08
LINC00398-201ENST00000414407 RUNDC1Q96C34 613 aa21.82■■□□□ 1.08
LINC00398-201ENST00000414407 ADAMTS7Q9UKP4 1686 aa21.82■■□□□ 1.08
LINC00398-201ENST00000414407 EZH2Q15910 746 aaKnown RBP21.81■■□□□ 1.08
LINC00398-201ENST00000414407 CABP4P57796 275 aa21.8■■□□□ 1.08
LINC00398-201ENST00000414407 NFE2L2Q16236 605 aa21.8■■□□□ 1.08
LINC00398-201ENST00000414407 LGR6Q9HBX8 967 aa21.8■■□□□ 1.08
LINC00398-201ENST00000414407 ITGB4P16144 1822 aa21.8■■□□□ 1.08
LINC00398-201ENST00000414407 SCN11AQ9UI33 1791 aa21.79■■□□□ 1.08
LINC00398-201ENST00000414407 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
LINC00398-201ENST00000414407 MRC1P22897 1456 aa21.78■■□□□ 1.08
LINC00398-201ENST00000414407 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
LINC00398-201ENST00000414407 IL17REQ8NFR9 667 aa21.78■■□□□ 1.08
LINC00398-201ENST00000414407 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
LINC00398-201ENST00000414407 SLC52A2Q9HAB3 445 aa21.78■■□□□ 1.08
LINC00398-201ENST00000414407 CCER2I3L3R5 266 aa21.77■■□□□ 1.08
LINC00398-201ENST00000414407 PROM2Q8N271 834 aa21.77■■□□□ 1.08
LINC00398-201ENST00000414407 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
LINC00398-201ENST00000414407 TXNRD1Q16881 649 aa21.76■■□□□ 1.07
LINC00398-201ENST00000414407 SLC27A3Q5K4L6 730 aa21.76■■□□□ 1.07
LINC00398-201ENST00000414407 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
LINC00398-201ENST00000414407 TMPOP42166 694 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms