RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 SMG6Q86US8 1419 aaKnown RBP31.49■■■□□ 2.63
TNFRSF25-206ENST00000414040 TXNRD1Q16881 649 aa31.49■■■□□ 2.63
TNFRSF25-206ENST00000414040 PAPPAQ13219 1627 aa31.48■■■□□ 2.63
TNFRSF25-206ENST00000414040 CGNL1Q0VF96 1302 aa31.47■■■□□ 2.63
TNFRSF25-206ENST00000414040 KIF24Q5T7B8 1368 aa31.46■■■□□ 2.63
TNFRSF25-206ENST00000414040 PDGFDQ9GZP0 370 aaPredicted RBP31.45■■■□□ 2.63
TNFRSF25-206ENST00000414040 ZCRB1Q8TBF4 217 aaKnown RBP31.43■■■□□ 2.62
TNFRSF25-206ENST00000414040 PPM1GO15355 546 aaPredicted RBP31.42■■■□□ 2.62
TNFRSF25-206ENST00000414040 PKD1L3Q7Z443 1732 aa31.41■■■□□ 2.62
TNFRSF25-206ENST00000414040 PANK3Q9H999 370 aa31.41■■■□□ 2.62
TNFRSF25-206ENST00000414040 LY75O60449 1722 aa31.4■■■□□ 2.62
TNFRSF25-206ENST00000414040 NSD2O96028 1365 aa31.39■■■□□ 2.62
TNFRSF25-206ENST00000414040 TOGARAM1Q9Y4F4 1720 aa31.38■■■□□ 2.61
TNFRSF25-206ENST00000414040 TNNT2P45379 298 aaPredicted RBP31.38■■■□□ 2.61
TNFRSF25-206ENST00000414040 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
TNFRSF25-206ENST00000414040 RAPGEF4Q8WZA2 1011 aa31.37■■■□□ 2.61
TNFRSF25-206ENST00000414040 POLKQ9UBT6 870 aa31.37■■■□□ 2.61
TNFRSF25-206ENST00000414040 PRIM1P49642 420 aaKnown RBP31.36■■■□□ 2.61
TNFRSF25-206ENST00000414040 TUBGCP6Q96RT7 1819 aa31.35■■■□□ 2.61
TNFRSF25-206ENST00000414040 SYTL4Q96C24 671 aaPredicted RBP31.35■■■□□ 2.61
TNFRSF25-206ENST00000414040 WASHC2AQ641Q2 1341 aa31.34■■■□□ 2.61
TNFRSF25-206ENST00000414040 TATP17735 454 aaPredicted RBP31.34■■■□□ 2.61
TNFRSF25-206ENST00000414040 LRRC4BQ9NT99 713 aa31.34■■■□□ 2.61
TNFRSF25-206ENST00000414040 ITGB4P16144 1822 aa31.33■■■□□ 2.61
TNFRSF25-206ENST00000414040 SLC15A2Q16348 729 aa31.33■■■□□ 2.61
TNFRSF25-206ENST00000414040 STK32BQ9NY57 414 aa31.33■■■□□ 2.61
TNFRSF25-206ENST00000414040 SPON1Q9HCB6 807 aa31.31■■■□□ 2.6
TNFRSF25-206ENST00000414040 KIF7Q2M1P5 1343 aa31.29■■■□□ 2.6
TNFRSF25-206ENST00000414040 KCNQ4P56696 695 aa31.29■■■□□ 2.6
TNFRSF25-206ENST00000414040 ZNF827Q17R98 1081 aa31.29■■■□□ 2.6
TNFRSF25-206ENST00000414040 EYA1Q99502 592 aa31.29■■■□□ 2.6
TNFRSF25-206ENST00000414040 ZBTB7AO95365 584 aa31.28■■■□□ 2.6
TNFRSF25-206ENST00000414040 QSER1Q2KHR3 1735 aa31.28■■■□□ 2.6
TNFRSF25-206ENST00000414040 CYP27B1O15528 508 aa31.27■■■□□ 2.6
TNFRSF25-206ENST00000414040 PCDH11XQ9BZA7 1347 aa31.26■■■□□ 2.6
TNFRSF25-206ENST00000414040 PCDH11YQ9BZA8 1340 aa31.26■■■□□ 2.6
TNFRSF25-206ENST00000414040 EIF4A2Q14240 407 aaKnown RBP31.25■■■□□ 2.59
TNFRSF25-206ENST00000414040 ATF5Q9Y2D1 282 aaPredicted RBP31.22■■■□□ 2.59
TNFRSF25-206ENST00000414040 TAF1LQ8IZX4 1826 aa31.21■■■□□ 2.59
TNFRSF25-206ENST00000414040 C5P01031 1676 aa31.2■■■□□ 2.59
TNFRSF25-206ENST00000414040 AKT1S1Q96B36 256 aa31.2■■■□□ 2.59
TNFRSF25-206ENST00000414040 PPP1R1BQ9UD71 204 aaPredicted RBP31.2■■■□□ 2.59
TNFRSF25-206ENST00000414040 PTGER2P43116 358 aa31.19■■■□□ 2.58
TNFRSF25-206ENST00000414040 SLC27A3Q5K4L6 730 aa31.19■■■□□ 2.58
TNFRSF25-206ENST00000414040 MORC1Q86VD1 984 aa31.18■■■□□ 2.58
TNFRSF25-206ENST00000414040 KNSTRNQ9Y448 316 aa31.16■■■□□ 2.58
TNFRSF25-206ENST00000414040 AMER1Q5JTC6 1135 aaPredicted RBP31.15■■■□□ 2.58
TNFRSF25-206ENST00000414040 IGSF1Q8N6C5 1336 aa31.15■■■□□ 2.58
TNFRSF25-206ENST00000414040 CCNL1Q9UK58 526 aaPredicted RBP31.14■■■□□ 2.58
TNFRSF25-206ENST00000414040 COL24A1Q17RW2 1714 aa31.13■■■□□ 2.57
TNFRSF25-206ENST00000414040 MPRIPQ6WCQ1 1025 aa31.13■■■□□ 2.57
TNFRSF25-206ENST00000414040 SGIP1Q9BQI5 828 aa31.12■■■□□ 2.57
TNFRSF25-206ENST00000414040 MTFR1LQ9H019 292 aa31.12■■■□□ 2.57
TNFRSF25-206ENST00000414040 SPG7Q9UQ90 795 aa31.12■■■□□ 2.57
TNFRSF25-206ENST00000414040 PNPLA7Q6ZV29 1317 aa31.11■■■□□ 2.57
TNFRSF25-206ENST00000414040 NKX1-1Q15270 411 aaPredicted RBP31.1■■■□□ 2.57
TNFRSF25-206ENST00000414040 PALLDQ8WX93 1383 aa31.09■■■□□ 2.57
TNFRSF25-206ENST00000414040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.08■■■□□ 2.57
TNFRSF25-206ENST00000414040 PER1O15534 1290 aaPredicted RBP31.07■■■□□ 2.56
TNFRSF25-206ENST00000414040 PHKG2P15735 406 aa31.07■■■□□ 2.56
TNFRSF25-206ENST00000414040 AEBP1Q8IUX7 1158 aa31.07■■■□□ 2.56
TNFRSF25-206ENST00000414040 PIGBQ92521 554 aa31.07■■■□□ 2.56
TNFRSF25-206ENST00000414040 C4BP0C0L5 1744 aa31.05■■■□□ 2.56
TNFRSF25-206ENST00000414040 TFCP2L1Q9NZI6 479 aa31.05■■■□□ 2.56
TNFRSF25-206ENST00000414040 IFNL2Q8IZJ0 200 aa31.03■■■□□ 2.56
TNFRSF25-206ENST00000414040 UBR3Q6ZT12 1888 aa31.01■■■□□ 2.56
TNFRSF25-206ENST00000414040 CC2D1BQ5T0F9 858 aaKnown RBP31.01■■■□□ 2.55
TNFRSF25-206ENST00000414040 FHDC1Q9C0D6 1143 aaPredicted RBP31.01■■■□□ 2.55
TNFRSF25-206ENST00000414040 IL13P35225 146 aa30.99■■■□□ 2.55
TNFRSF25-206ENST00000414040 PLEKHG2Q9H7P9 1386 aa30.99■■■□□ 2.55
TNFRSF25-206ENST00000414040 VIRMAQ69YN4 1812 aaKnown RBP30.98■■■□□ 2.55
TNFRSF25-206ENST00000414040 KDM6AO15550 1401 aaPredicted RBP30.98■■■□□ 2.55
TNFRSF25-206ENST00000414040 CNGB1Q14028 1251 aaPredicted RBP30.97■■■□□ 2.55
TNFRSF25-206ENST00000414040 COL23A1Q86Y22 540 aaPredicted RBP30.97■■■□□ 2.55
TNFRSF25-206ENST00000414040 ARXQ96QS3 562 aa30.97■■■□□ 2.55
TNFRSF25-206ENST00000414040 TMOD3Q9NYL9 352 aa30.97■■■□□ 2.55
TNFRSF25-206ENST00000414040 ASAP1Q9ULH1 1129 aa30.97■■■□□ 2.55
TNFRSF25-206ENST00000414040 MTHFSP49914 203 aa30.96■■■□□ 2.55
TNFRSF25-206ENST00000414040 SULT6B1Q6IMI4 303 aa30.96■■■□□ 2.55
TNFRSF25-206ENST00000414040 SMARCC1Q92922 1105 aaPredicted RBP30.96■■■□□ 2.55
TNFRSF25-206ENST00000414040 KDRP35968 1356 aa30.95■■■□□ 2.55
TNFRSF25-206ENST00000414040 SYT17Q9BSW7 474 aa30.95■■■□□ 2.55
TNFRSF25-206ENST00000414040 ZNF530Q6P9A1 599 aaPredicted RBP30.94■■■□□ 2.54
TNFRSF25-206ENST00000414040 AMIGO3Q86WK7 504 aa30.94■■■□□ 2.54
TNFRSF25-206ENST00000414040 SLC16A10Q8TF71 515 aa30.94■■■□□ 2.54
TNFRSF25-206ENST00000414040 SCN11AQ9UI33 1791 aa30.94■■■□□ 2.54
TNFRSF25-206ENST00000414040 PLEKHO1Q53GL0 409 aaPredicted RBP30.93■■■□□ 2.54
TNFRSF25-206ENST00000414040 SMIM5Q71RC9 77 aa30.93■■■□□ 2.54
TNFRSF25-206ENST00000414040 MSH5O43196 834 aa30.91■■■□□ 2.54
TNFRSF25-206ENST00000414040 ATG3Q9NT62 314 aa30.91■■■□□ 2.54
TNFRSF25-206ENST00000414040 LOC102724428A0A0B4J2F2 783 aa30.9■■■□□ 2.54
TNFRSF25-206ENST00000414040 SIK1P57059 783 aa30.9■■■□□ 2.54
TNFRSF25-206ENST00000414040 COL3A1P02461 1466 aaPredicted RBP30.89■■■□□ 2.54
TNFRSF25-206ENST00000414040 ITPK1Q13572 414 aa30.89■■■□□ 2.54
TNFRSF25-206ENST00000414040 LINC00116Q8NCU8 138 aa30.89■■■□□ 2.54
TNFRSF25-206ENST00000414040 COL5A3P25940 1745 aaPredicted RBP30.89■■■□□ 2.54
TNFRSF25-206ENST00000414040 MSL1Q68DK7 614 aa30.88■■■□□ 2.53
TNFRSF25-206ENST00000414040 NPC1L1Q9UHC9 1359 aa30.88■■■□□ 2.53
TNFRSF25-206ENST00000414040 ZNF831Q5JPB2 1677 aa30.87■■■□□ 2.53
TNFRSF25-206ENST00000414040 AMOTQ4VCS5 1084 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms