RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
SEMA3F-202ENST00000413852 POGZQ7Z3K3 1410 aa17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 G2E3Q7L622 706 aa17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 LARP6Q9BRS8 491 aaKnown RBP17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 API5Q9BZZ5 524 aaKnown RBP17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 MSH6P52701 1360 aa17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 NEK4P51957 841 aa17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
SEMA3F-202ENST00000413852 NPM1P06748 294 aaKnown RBP eCLIP17.92■□□□□ 0.46
SEMA3F-202ENST00000413852 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
SEMA3F-202ENST00000413852 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
SEMA3F-202ENST00000413852 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
SEMA3F-202ENST00000413852 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
SEMA3F-202ENST00000413852 FOXO3O43524 673 aa17.91■□□□□ 0.46
SEMA3F-202ENST00000413852 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
SEMA3F-202ENST00000413852 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
SEMA3F-202ENST00000413852 OFD1O75665 1012 aa17.91■□□□□ 0.46
SEMA3F-202ENST00000413852 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
SEMA3F-202ENST00000413852 ZNF445P59923 1031 aa17.9■□□□□ 0.46
SEMA3F-202ENST00000413852 NUCB2P80303 420 aa17.9■□□□□ 0.46
SEMA3F-202ENST00000413852 PIK3C2BO00750 1634 aa17.9■□□□□ 0.46
SEMA3F-202ENST00000413852 SLC4A2P04920 1241 aa17.89■□□□□ 0.46
SEMA3F-202ENST00000413852 UPF3BQ9BZI7 483 aaKnown RBP17.89■□□□□ 0.46
SEMA3F-202ENST00000413852 CLEC17AQ6ZS10 378 aa17.89■□□□□ 0.45
SEMA3F-202ENST00000413852 ZNF830Q96NB3 372 aaPredicted RBP17.89■□□□□ 0.45
SEMA3F-202ENST00000413852 TSC1Q92574 1164 aa17.89■□□□□ 0.45
SEMA3F-202ENST00000413852 MLECQ14165 292 aa17.88■□□□□ 0.45
SEMA3F-202ENST00000413852 HECW2Q9P2P5 1572 aa17.88■□□□□ 0.45
SEMA3F-202ENST00000413852 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.88■□□□□ 0.45
SEMA3F-202ENST00000413852 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
SEMA3F-202ENST00000413852 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
SEMA3F-202ENST00000413852 ST18O60284 1047 aa17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 MAP4K4O95819 1239 aaPredicted RBP17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 TPM2P07951 284 aa17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 TMX3Q96JJ7 454 aa17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 MAP2P11137 1827 aaKnown RBP17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 ZNF428Q96B54 188 aa17.87■□□□□ 0.45
SEMA3F-202ENST00000413852 YEATS2Q9ULM3 1422 aa17.86■□□□□ 0.45
SEMA3F-202ENST00000413852 PTMSP20962 102 aa17.86■□□□□ 0.45
SEMA3F-202ENST00000413852 C17orf53Q8N3J3 647 aaPredicted RBP17.86■□□□□ 0.45
SEMA3F-202ENST00000413852 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
SEMA3F-202ENST00000413852 RTL1A6NKG5 1358 aa17.86■□□□□ 0.45
SEMA3F-202ENST00000413852 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 IL25Q9H293 177 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 ARHGEF40Q8TER5 1519 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 UQCRHLA0A096LP55 91 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 UQCRHP07919 91 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 COG3Q96JB2 828 aa17.85■□□□□ 0.45
SEMA3F-202ENST00000413852 TRIM6-TRIM34B2RNG4 842 aa17.84■□□□□ 0.45
SEMA3F-202ENST00000413852 RGS12O14924 1447 aa17.84■□□□□ 0.45
SEMA3F-202ENST00000413852 ERC2O15083 957 aa17.84■□□□□ 0.45
SEMA3F-202ENST00000413852 HSP90AB2PQ58FF8 381 aa17.84■□□□□ 0.45
SEMA3F-202ENST00000413852 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
SEMA3F-202ENST00000413852 PDE1AP54750 535 aa17.83■□□□□ 0.45
SEMA3F-202ENST00000413852 EIF4A2Q14240 407 aaKnown RBP17.83■□□□□ 0.45
SEMA3F-202ENST00000413852 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.45
SEMA3F-202ENST00000413852 SLC52A1Q9NWF4 448 aa17.83■□□□□ 0.45
SEMA3F-202ENST00000413852 NOL7Q9UMY1 257 aaKnown RBP17.83■□□□□ 0.44
SEMA3F-202ENST00000413852 CASC1Q6TDU7 716 aa17.83■□□□□ 0.44
SEMA3F-202ENST00000413852 LRSAM1Q6UWE0 723 aa17.82■□□□□ 0.44
SEMA3F-202ENST00000413852 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.82■□□□□ 0.44
SEMA3F-202ENST00000413852 PDLIM2Q96JY6 352 aa17.82■□□□□ 0.44
SEMA3F-202ENST00000413852 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 PNMA6EA0A0J9YXQ4 647 aa17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 MLH3Q9UHC1 1453 aa17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 RPAP2Q8IXW5 612 aaPredicted RBP17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 PDCL3Q9H2J4 239 aa17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
SEMA3F-202ENST00000413852 CPS1P31327 1500 aa17.8■□□□□ 0.44
SEMA3F-202ENST00000413852 PTMAP06454 111 aaKnown RBP17.8■□□□□ 0.44
SEMA3F-202ENST00000413852 REC8O95072 547 aa17.8■□□□□ 0.44
SEMA3F-202ENST00000413852 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
SEMA3F-202ENST00000413852 DLG5Q8TDM6 1919 aa17.8■□□□□ 0.44
SEMA3F-202ENST00000413852 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
SEMA3F-202ENST00000413852 IBTKQ9P2D0 1353 aaPredicted RBP17.79■□□□□ 0.44
SEMA3F-202ENST00000413852 ZKSCAN5Q9Y2L8 839 aa17.79■□□□□ 0.44
SEMA3F-202ENST00000413852 ANKRD26Q9UPS8 1709 aa17.79■□□□□ 0.44
SEMA3F-202ENST00000413852 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
SEMA3F-202ENST00000413852 CHL1O00533 1208 aa17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 ALKQ9UM73 1620 aa17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 KIF20BQ96Q89 1820 aa17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 CPA1P15085 419 aa17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 DDX54Q8TDD1 881 aaKnown RBP17.78■□□□□ 0.44
SEMA3F-202ENST00000413852 PLCB2Q00722 1185 aa17.77■□□□□ 0.44
SEMA3F-202ENST00000413852 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
SEMA3F-202ENST00000413852 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
SEMA3F-202ENST00000413852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
SEMA3F-202ENST00000413852 USP48Q86UV5 1035 aa17.76■□□□□ 0.43
SEMA3F-202ENST00000413852 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
SEMA3F-202ENST00000413852 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
SEMA3F-202ENST00000413852 BRD1O95696 1058 aa17.75■□□□□ 0.43
SEMA3F-202ENST00000413852 USP25Q9UHP3 1055 aa17.75■□□□□ 0.43
SEMA3F-202ENST00000413852 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
SEMA3F-202ENST00000413852 METP08581 1390 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms