RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MORC1Q86VD1 984 aa36.08■■■■□ 3.37
VEGFA-207ENST00000413642 NSD2O96028 1365 aa36.07■■■■□ 3.36
VEGFA-207ENST00000413642 TXNRD1Q16881 649 aa36.06■■■■□ 3.36
VEGFA-207ENST00000413642 EYA1Q99502 592 aa36.06■■■■□ 3.36
VEGFA-207ENST00000413642 NHSQ6T4R5 1651 aa36.05■■■■□ 3.36
VEGFA-207ENST00000413642 ANKRD26Q9UPS8 1709 aa36.05■■■■□ 3.36
VEGFA-207ENST00000413642 AMER1Q5JTC6 1135 aaPredicted RBP36.04■■■■□ 3.36
VEGFA-207ENST00000413642 ANO8Q9HCE9 1232 aaPredicted RBP36.04■■■■□ 3.36
VEGFA-207ENST00000413642 EIF4A2Q14240 407 aaKnown RBP36.03■■■■□ 3.36
VEGFA-207ENST00000413642 MAP2P11137 1827 aaKnown RBP36.01■■■■□ 3.36
VEGFA-207ENST00000413642 PRIM1P49642 420 aaKnown RBP36.01■■■■□ 3.36
VEGFA-207ENST00000413642 SYTL4Q96C24 671 aaPredicted RBP36■■■■□ 3.35
VEGFA-207ENST00000413642 RGPD3A6NKT7 1758 aaPredicted RBP35.99■■■■□ 3.35
VEGFA-207ENST00000413642 RGPD4Q7Z3J3 1758 aa35.99■■■■□ 3.35
VEGFA-207ENST00000413642 PER1O15534 1290 aaPredicted RBP35.99■■■■□ 3.35
VEGFA-207ENST00000413642 SHANK3Q9BYB0 1731 aa35.99■■■■□ 3.35
VEGFA-207ENST00000413642 NCAPD2Q15021 1401 aa35.99■■■■□ 3.35
VEGFA-207ENST00000413642 CYP27B1O15528 508 aa35.94■■■■□ 3.34
VEGFA-207ENST00000413642 SRCAPQ6ZRS2 3230 aa35.94■■■■□ 3.34
VEGFA-207ENST00000413642 PCDH11XQ9BZA7 1347 aa35.93■■■■□ 3.34
VEGFA-207ENST00000413642 PCDH11YQ9BZA8 1340 aa35.93■■■■□ 3.34
VEGFA-207ENST00000413642 CC2D1BQ5T0F9 858 aaKnown RBP35.91■■■■□ 3.34
VEGFA-207ENST00000413642 BTAF1O14981 1849 aa35.91■■■■□ 3.34
VEGFA-207ENST00000413642 CNGB1Q14028 1251 aaPredicted RBP35.89■■■■□ 3.34
VEGFA-207ENST00000413642 PDGFDQ9GZP0 370 aaPredicted RBP35.89■■■■□ 3.34
VEGFA-207ENST00000413642 LRRC4BQ9NT99 713 aa35.89■■■■□ 3.34
VEGFA-207ENST00000413642 LRP5O75197 1615 aa35.89■■■■□ 3.34
VEGFA-207ENST00000413642 DOT1LQ8TEK3 1739 aa35.88■■■■□ 3.33
VEGFA-207ENST00000413642 STK32BQ9NY57 414 aa35.87■■■■□ 3.33
VEGFA-207ENST00000413642 IGSF1Q8N6C5 1336 aa35.86■■■■□ 3.33
VEGFA-207ENST00000413642 KCNQ4P56696 695 aa35.86■■■■□ 3.33
VEGFA-207ENST00000413642 SLC15A2Q16348 729 aa35.85■■■■□ 3.33
VEGFA-207ENST00000413642 SPG7Q9UQ90 795 aa35.85■■■■□ 3.33
VEGFA-207ENST00000413642 KAT6BQ8WYB5 2073 aa35.83■■■■□ 3.33
VEGFA-207ENST00000413642 MTHFSP49914 203 aa35.81■■■■□ 3.32
VEGFA-207ENST00000413642 AEBP1Q8IUX7 1158 aa35.81■■■■□ 3.32
VEGFA-207ENST00000413642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.8■■■■□ 3.327e-31■□□□□ 9.1
VEGFA-207ENST00000413642 PKD1L3Q7Z443 1732 aa35.8■■■■□ 3.32
VEGFA-207ENST00000413642 IL13P35225 146 aa35.79■■■■□ 3.32
VEGFA-207ENST00000413642 ZNF827Q17R98 1081 aa35.79■■■■□ 3.32
VEGFA-207ENST00000413642 MPRIPQ6WCQ1 1025 aa35.79■■■■□ 3.32
VEGFA-207ENST00000413642 NKX1-1Q15270 411 aaPredicted RBP35.78■■■■□ 3.32
VEGFA-207ENST00000413642 PHKG2P15735 406 aa35.76■■■■□ 3.32
VEGFA-207ENST00000413642 SLC27A3Q5K4L6 730 aa35.76■■■■□ 3.32
VEGFA-207ENST00000413642 SPON1Q9HCB6 807 aa35.75■■■■□ 3.31
VEGFA-207ENST00000413642 PAPPAQ13219 1627 aa35.75■■■■□ 3.31
VEGFA-207ENST00000413642 ZBTB7AO95365 584 aa35.74■■■■□ 3.31
VEGFA-207ENST00000413642 SULT6B1Q6IMI4 303 aa35.73■■■■□ 3.31
VEGFA-207ENST00000413642 IFNL2Q8IZJ0 200 aa35.73■■■■□ 3.31
VEGFA-207ENST00000413642 AKT1S1Q96B36 256 aa35.72■■■■□ 3.31
VEGFA-207ENST00000413642 NPC1L1Q9UHC9 1359 aa35.72■■■■□ 3.31
VEGFA-207ENST00000413642 PIGBQ92521 554 aa35.71■■■■□ 3.31
VEGFA-207ENST00000413642 CCNL1Q9UK58 526 aaPredicted RBP35.71■■■■□ 3.31
VEGFA-207ENST00000413642 TOGARAM1Q9Y4F4 1720 aa35.71■■■■□ 3.31
VEGFA-207ENST00000413642 CASZ1Q86V15 1759 aa35.7■■■■□ 3.31
VEGFA-207ENST00000413642 PLEKHO1Q53GL0 409 aaPredicted RBP35.69■■■■□ 3.3
VEGFA-207ENST00000413642 ATF5Q9Y2D1 282 aaPredicted RBP35.69■■■■□ 3.3
VEGFA-207ENST00000413642 PALLDQ8WX93 1383 aa35.65■■■■□ 3.3
VEGFA-207ENST00000413642 ZNF530Q6P9A1 599 aaPredicted RBP35.65■■■■□ 3.3
VEGFA-207ENST00000413642 PLEKHG2Q9H7P9 1386 aa35.64■■■■□ 3.3
VEGFA-207ENST00000413642 LY75O60449 1722 aa35.63■■■■□ 3.29
VEGFA-207ENST00000413642 KDRP35968 1356 aa35.63■■■■□ 3.29
VEGFA-207ENST00000413642 HMOX1P09601 288 aa35.62■■■■□ 3.29
VEGFA-207ENST00000413642 AMOTQ4VCS5 1084 aa35.62■■■■□ 3.29
VEGFA-207ENST00000413642 TMOD3Q9NYL9 352 aa35.62■■■■□ 3.29
VEGFA-207ENST00000413642 DIAPH1O60610 1272 aaKnown RBP35.61■■■■□ 3.29
VEGFA-207ENST00000413642 PPP1R1BQ9UD71 204 aaPredicted RBP35.61■■■■□ 3.29
VEGFA-207ENST00000413642 PTGER2P43116 358 aa35.6■■■■□ 3.29
VEGFA-207ENST00000413642 TFCP2L1Q9NZI6 479 aa35.6■■■■□ 3.29
VEGFA-207ENST00000413642 PNPLA7Q6ZV29 1317 aa35.59■■■■□ 3.29
VEGFA-207ENST00000413642 SMARCC1Q92922 1105 aaPredicted RBP35.59■■■■□ 3.29
VEGFA-207ENST00000413642 ASAP1Q9ULH1 1129 aa35.59■■■■□ 3.29
VEGFA-207ENST00000413642 MTFR1LQ9H019 292 aa35.57■■■■□ 3.28
VEGFA-207ENST00000413642 ITGB4P16144 1822 aa35.57■■■■□ 3.28
VEGFA-207ENST00000413642 DCAF5Q96JK2 942 aa35.56■■■■□ 3.28
VEGFA-207ENST00000413642 KDM6AO15550 1401 aaPredicted RBP35.55■■■■□ 3.28
VEGFA-207ENST00000413642 COL3A1P02461 1466 aaPredicted RBP35.54■■■■□ 3.28
VEGFA-207ENST00000413642 ATG3Q9NT62 314 aa35.54■■■■□ 3.28
VEGFA-207ENST00000413642 HSP90AB1P08238 724 aaKnown RBP35.53■■■■□ 3.28
VEGFA-207ENST00000413642 C1orf141Q5JVX7 400 aa35.53■■■■□ 3.28
VEGFA-207ENST00000413642 ERVV-2B6SEH9 535 aa35.52■■■■□ 3.28
VEGFA-207ENST00000413642 SGIP1Q9BQI5 828 aa35.52■■■■□ 3.28
VEGFA-207ENST00000413642 LOC102724428A0A0B4J2F2 783 aa35.49■■■■□ 3.27
VEGFA-207ENST00000413642 U2SURPO15042 1029 aaKnown RBP35.49■■■■□ 3.27
VEGFA-207ENST00000413642 SIK1P57059 783 aa35.49■■■■□ 3.27
VEGFA-207ENST00000413642 PPP2R1AP30153 589 aa35.48■■■■□ 3.27
VEGFA-207ENST00000413642 CABP4P57796 275 aa35.48■■■■□ 3.27
VEGFA-207ENST00000413642 COL23A1Q86Y22 540 aaPredicted RBP35.48■■■■□ 3.27
VEGFA-207ENST00000413642 ITPK1Q13572 414 aa35.46■■■■□ 3.27
VEGFA-207ENST00000413642 MSH5O43196 834 aa35.45■■■■□ 3.27
VEGFA-207ENST00000413642 MTHFSDQ2M296 383 aaKnown RBP35.45■■■■□ 3.27
VEGFA-207ENST00000413642 SMIM5Q71RC9 77 aa35.45■■■■□ 3.27
VEGFA-207ENST00000413642 LINC00116Q8NCU8 138 aa35.45■■■■□ 3.27
VEGFA-207ENST00000413642 AMIGO3Q86WK7 504 aa35.44■■■■□ 3.26
VEGFA-207ENST00000413642 SLC16A10Q8TF71 515 aa35.44■■■■□ 3.26
VEGFA-207ENST00000413642 AKAP4Q5JQC9 854 aa35.43■■■■□ 3.26
VEGFA-207ENST00000413642 TUBGCP6Q96RT7 1819 aa35.43■■■■□ 3.26
VEGFA-207ENST00000413642 ATP6V1AP38606 617 aa35.42■■■■□ 3.26
VEGFA-207ENST00000413642 NFATC2IPQ8NCF5 419 aa35.42■■■■□ 3.26
VEGFA-207ENST00000413642 SLC4A9Q96Q91 983 aa35.42■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms