RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 ALDH1L2Q3SY69 923 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 CLEC17AQ6ZS10 378 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 FYB1O15117 783 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
SIK3-202ENST00000413553 TERF1P54274 439 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 PKP1Q13835 747 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 RABEP1Q15276 862 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
SIK3-202ENST00000413553 NOL7Q9UMY1 257 aaKnown RBP10.97□□□□□ -0.65
SIK3-202ENST00000413553 MED14O60244 1454 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 PRPF40AO75400 957 aaKnown RBP10.97□□□□□ -0.65
SIK3-202ENST00000413553 LMBRD1Q9NUN5 540 aa10.97□□□□□ -0.65
SIK3-202ENST00000413553 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
SIK3-202ENST00000413553 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
SIK3-202ENST00000413553 CHMP4BQ9H444 224 aaKnown RBP10.96□□□□□ -0.65
SIK3-202ENST00000413553 CPS1P31327 1500 aa10.96□□□□□ -0.65
SIK3-202ENST00000413553 HSPA2P54652 639 aa10.96□□□□□ -0.66
SIK3-202ENST00000413553 HS1BP3Q53T59 392 aa10.96□□□□□ -0.66
SIK3-202ENST00000413553 ELL2O00472 640 aaPredicted RBP10.95□□□□□ -0.66
SIK3-202ENST00000413553 NGDNQ8NEJ9 315 aaKnown RBP10.95□□□□□ -0.66
SIK3-202ENST00000413553 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
SIK3-202ENST00000413553 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
SIK3-202ENST00000413553 GSPT1P15170 499 aaKnown RBP10.95□□□□□ -0.66
SIK3-202ENST00000413553 ZKSCAN5Q9Y2L8 839 aa10.95□□□□□ -0.66
SIK3-202ENST00000413553 PIK3R4Q99570 1358 aa10.95□□□□□ -0.66
SIK3-202ENST00000413553 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
SIK3-202ENST00000413553 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
SIK3-202ENST00000413553 DIAPH1O60610 1272 aaKnown RBP10.94□□□□□ -0.66
SIK3-202ENST00000413553 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
SIK3-202ENST00000413553 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
SIK3-202ENST00000413553 KNDC1Q76NI1 1749 aa10.94□□□□□ -0.66
SIK3-202ENST00000413553 SYCE3A1L190 88 aa10.94□□□□□ -0.66
SIK3-202ENST00000413553 PDLIM2Q96JY6 352 aa10.94□□□□□ -0.66
SIK3-202ENST00000413553 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
SIK3-202ENST00000413553 DIP2AQ14689 1571 aa10.94□□□□□ -0.66
SIK3-202ENST00000413553 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 ZGPATQ8N5A5 531 aaKnown RBP10.93□□□□□ -0.66
SIK3-202ENST00000413553 ACEP12821 1306 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 PTMAP06454 111 aaKnown RBP10.93□□□□□ -0.66
SIK3-202ENST00000413553 NME9Q86XW9 330 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 RNF214Q8ND24 703 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 GPT2Q8TD30 523 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 COG3Q96JB2 828 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 PTCH1Q13635 1447 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 COL3A1P02461 1466 aaPredicted RBP10.93□□□□□ -0.66
SIK3-202ENST00000413553 ST18O60284 1047 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 CHAMP1Q96JM3 812 aa10.93□□□□□ -0.66
SIK3-202ENST00000413553 THUMPD2Q9BTF0 503 aaKnown RBP10.93□□□□□ -0.66
SIK3-202ENST00000413553 ATP7BP35670 1465 aa10.92□□□□□ -0.66
SIK3-202ENST00000413553 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
SIK3-202ENST00000413553 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
SIK3-202ENST00000413553 CYP2E1P05181 493 aaPredicted RBP10.92□□□□□ -0.66
SIK3-202ENST00000413553 CCDC39Q9UFE4 941 aa10.92□□□□□ -0.66
SIK3-202ENST00000413553 SOX12O15370 315 aa10.92□□□□□ -0.66
SIK3-202ENST00000413553 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
SIK3-202ENST00000413553 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
SIK3-202ENST00000413553 APBB1O00213 710 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 FBLN1P23142 703 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 PRKAR2BP31323 418 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 INTS3Q68E01 1043 aaKnown RBP10.91□□□□□ -0.66
SIK3-202ENST00000413553 LRSAM1Q6UWE0 723 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 PLEKHM2Q8IWE5 1019 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 CWC22Q9HCG8 908 aaKnown RBP10.91□□□□□ -0.66
SIK3-202ENST00000413553 TMEM63CQ9P1W3 806 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
SIK3-202ENST00000413553 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 DYNC1I1O14576 645 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 TSPYL6Q8N831 410 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 ZNF428Q96B54 188 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 LRRC7Q96NW7 1537 aa10.91□□□□□ -0.66
SIK3-202ENST00000413553 DNTTIP2Q5QJE6 756 aaKnown RBP10.9□□□□□ -0.66
SIK3-202ENST00000413553 TTC22Q5TAA0 569 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 CASC1Q6TDU7 716 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 USP26Q9BXU7 913 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 VAMP4O75379 141 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 SASS6Q6UVJ0 657 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
SIK3-202ENST00000413553 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.66
SIK3-202ENST00000413553 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
SIK3-202ENST00000413553 PLEKHG3A1L390 1219 aa10.9□□□□□ -0.67
SIK3-202ENST00000413553 MTERF4Q7Z6M4 381 aaKnown RBP10.9□□□□□ -0.67
SIK3-202ENST00000413553 PRDM4Q9UKN5 801 aa10.9□□□□□ -0.67
SIK3-202ENST00000413553 NSFL1CQ9UNZ2 370 aaKnown RBP10.9□□□□□ -0.67
SIK3-202ENST00000413553 HMOX1P09601 288 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 MCM5P33992 734 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 ARHGAP45Q92619 1136 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 CPSF1Q10570 1443 aaKnown RBP10.89□□□□□ -0.67
SIK3-202ENST00000413553 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
SIK3-202ENST00000413553 ABCC4O15439 1325 aa10.88□□□□□ -0.67
SIK3-202ENST00000413553 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
SIK3-202ENST00000413553 ZDHHC9Q9Y397 364 aa10.88□□□□□ -0.67
SIK3-202ENST00000413553 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
SIK3-202ENST00000413553 OTUD7AQ8TE49 926 aaPredicted RBP10.88□□□□□ -0.67
SIK3-202ENST00000413553 TTC21BQ7Z4L5 1316 aa10.88□□□□□ -0.67
SIK3-202ENST00000413553 FCHSD2O94868 740 aa10.88□□□□□ -0.67
SIK3-202ENST00000413553 KIAA2012Q0VF49 1180 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms