RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
HDAC9-207ENST00000413509 ZBTB7CA1YPR0 619 aa10.71□□□□□ -0.69
HDAC9-207ENST00000413509 CHL1O00533 1208 aa10.71□□□□□ -0.69
HDAC9-207ENST00000413509 MEGF6O75095 1541 aa10.71□□□□□ -0.69
HDAC9-207ENST00000413509 RARSP54136 660 aaKnown RBP10.71□□□□□ -0.69
HDAC9-207ENST00000413509 VIRMAQ69YN4 1812 aaKnown RBP10.71□□□□□ -0.69
HDAC9-207ENST00000413509 WDR17Q8IZU2 1322 aa10.71□□□□□ -0.69
HDAC9-207ENST00000413509 PARP4Q9UKK3 1724 aaKnown RBP10.71□□□□□ -0.69
HDAC9-207ENST00000413509 SIPA1L3O60292 1781 aaPredicted RBP10.7□□□□□ -0.7
HDAC9-207ENST00000413509 GNAT3A8MTJ3 354 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 EXOSC9Q06265 439 aaKnown RBP10.7□□□□□ -0.7
HDAC9-207ENST00000413509 CHRNA2Q15822 529 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 AMOTQ4VCS5 1084 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 ZNF428Q96B54 188 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
HDAC9-207ENST00000413509 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.7□□□□□ -0.7
HDAC9-207ENST00000413509 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-207ENST00000413509 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-207ENST00000413509 DCTN1Q14203 1278 aa10.69□□□□□ -0.7
HDAC9-207ENST00000413509 PLEKHO1Q53GL0 409 aaPredicted RBP10.69□□□□□ -0.7
HDAC9-207ENST00000413509 MCM10Q7L590 875 aa10.69□□□□□ -0.7
HDAC9-207ENST00000413509 KDM3BQ7LBC6 1761 aa10.69□□□□□ -0.7
HDAC9-207ENST00000413509 NRAPQ86VF7 1730 aa10.69□□□□□ -0.7
HDAC9-207ENST00000413509 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
HDAC9-207ENST00000413509 SCN11AQ9UI33 1791 aa10.68□□□□□ -0.7
HDAC9-207ENST00000413509 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
HDAC9-207ENST00000413509 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
HDAC9-207ENST00000413509 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
HDAC9-207ENST00000413509 MRC1P22897 1456 aa10.68□□□□□ -0.7
HDAC9-207ENST00000413509 SHANK3Q9BYB0 1731 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 NWD2Q9ULI1 1742 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 BCAR3O75815 825 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 ALDH1L2Q3SY69 923 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-207ENST00000413509 RTF1Q92541 710 aaKnown RBP10.67□□□□□ -0.7
HDAC9-207ENST00000413509 CARD10Q9BWT7 1032 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 NLRP2Q9NX02 1062 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 WNK3Q9BYP7 1800 aa10.67□□□□□ -0.7
HDAC9-207ENST00000413509 UBAP1LF5GYI3 381 aa10.66□□□□□ -0.7
HDAC9-207ENST00000413509 VAMP4O75379 141 aa10.66□□□□□ -0.7
HDAC9-207ENST00000413509 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
HDAC9-207ENST00000413509 ZNF530Q6P9A1 599 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-207ENST00000413509 DISP2A7MBM2 1401 aa10.66□□□□□ -0.7
HDAC9-207ENST00000413509 SOS1Q07889 1333 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-207ENST00000413509 PLIN1O60240 522 aa10.65□□□□□ -0.7
HDAC9-207ENST00000413509 ADRA2BP18089 450 aa10.65□□□□□ -0.7
HDAC9-207ENST00000413509 C20orf194Q5TEA3 1177 aa10.65□□□□□ -0.7
HDAC9-207ENST00000413509 SSH1Q8WYL5 1049 aa10.65□□□□□ -0.7
HDAC9-207ENST00000413509 RAPGEF4Q8WZA2 1011 aa10.65□□□□□ -0.7
HDAC9-207ENST00000413509 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-207ENST00000413509 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
HDAC9-207ENST00000413509 TATP17735 454 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-207ENST00000413509 HAP1P54257 671 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-207ENST00000413509 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
HDAC9-207ENST00000413509 TSPYL6Q8N831 410 aa10.64□□□□□ -0.71
HDAC9-207ENST00000413509 C8orf58Q8NAV2 365 aa10.64□□□□□ -0.71
HDAC9-207ENST00000413509 SLIT2O94813 1529 aa10.63□□□□□ -0.71
HDAC9-207ENST00000413509 RNMTO43148 476 aaKnown RBP10.63□□□□□ -0.71
HDAC9-207ENST00000413509 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
HDAC9-207ENST00000413509 EXOC6Q8TAG9 804 aa10.63□□□□□ -0.71
HDAC9-207ENST00000413509 SPG7Q9UQ90 795 aa10.63□□□□□ -0.71
HDAC9-207ENST00000413509 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
HDAC9-207ENST00000413509 JCADQ9P266 1359 aa10.63□□□□□ -0.71
HDAC9-207ENST00000413509 CACNA1FO60840 1977 aa10.63□□□□□ -0.71
HDAC9-207ENST00000413509 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 SOCS7O14512 581 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 PHKG2P15735 406 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-207ENST00000413509 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
HDAC9-207ENST00000413509 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
HDAC9-207ENST00000413509 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 LGR6Q9HBX8 967 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 BTG4Q9NY30 223 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 HEG1Q9ULI3 1381 aa10.62□□□□□ -0.71
HDAC9-207ENST00000413509 CYP27B1O15528 508 aa10.61□□□□□ -0.71
HDAC9-207ENST00000413509 TOM1L2Q6ZVM7 507 aa10.61□□□□□ -0.71
HDAC9-207ENST00000413509 SMC4Q9NTJ3 1288 aa10.61□□□□□ -0.71
HDAC9-207ENST00000413509 LRP6O75581 1613 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 PAPPAQ13219 1627 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 MSH5O43196 834 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 IL2RBP14784 551 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 NKX1-1Q15270 411 aaPredicted RBP10.6□□□□□ -0.71
HDAC9-207ENST00000413509 ZKSCAN2Q63HK3 967 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 MPRIPQ6WCQ1 1025 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 IFNL2Q8IZJ0 200 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 ARHGAP45Q92619 1136 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 BCL2L13Q9BXK5 485 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
HDAC9-207ENST00000413509 GLI3P10071 1580 aa10.6□□□□□ -0.71
HDAC9-207ENST00000413509 PCDH11XQ9BZA7 1347 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 PCDH11YQ9BZA8 1340 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
HDAC9-207ENST00000413509 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
HDAC9-207ENST00000413509 HOXB7P09629 217 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms