RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 USP17L5A8MUK1 530 aa8.82□□□□□ -1
NOD1-203ENST00000413433 PIK3CDO00329 1044 aa8.82□□□□□ -1
NOD1-203ENST00000413433 FBXO45P0C2W1 286 aa8.82□□□□□ -1
NOD1-203ENST00000413433 ARID4AP29374 1257 aaPredicted RBP8.82□□□□□ -1
NOD1-203ENST00000413433 TXNDC2Q86VQ3 553 aa8.82□□□□□ -1
NOD1-203ENST00000413433 SYNJ2O15056 1496 aa8.82□□□□□ -1
NOD1-203ENST00000413433 MORN1Q5T089 497 aa8.81□□□□□ -1
NOD1-203ENST00000413433 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
NOD1-203ENST00000413433 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
NOD1-203ENST00000413433 UNCXA6NJT0 531 aa8.8□□□□□ -1
NOD1-203ENST00000413433 FAM196BA6NMK8 535 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L15C9J2P7 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L10C9JJH3 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L12C9JPN9 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L11C9JVI0 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L21D6R901 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L18D6R9N7 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L22D6RA61 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L19D6RCP7 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L20D6RJB6 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 TERTO14746 1132 aaKnown RBP8.8□□□□□ -1
NOD1-203ENST00000413433 USP17L24Q0WX57 530 aa8.8□□□□□ -1
NOD1-203ENST00000413433 Q3C1V9 767 aa8.8□□□□□ -1
NOD1-203ENST00000413433 DESI1Q6ICB0 168 aa8.8□□□□□ -1
NOD1-203ENST00000413433 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
NOD1-203ENST00000413433 FCF1Q9Y324 198 aaKnown RBP8.8□□□□□ -1
NOD1-203ENST00000413433 SYNJ1O43426 1573 aa8.8□□□□□ -1
NOD1-203ENST00000413433 FAM181BA6NEQ2 426 aa8.79□□□□□ -1
NOD1-203ENST00000413433 ZNF592Q92610 1267 aa8.79□□□□□ -1
NOD1-203ENST00000413433 THAP11Q96EK4 314 aa8.79□□□□□ -1
NOD1-203ENST00000413433 SENP2Q9HC62 589 aa8.79□□□□□ -1
NOD1-203ENST00000413433 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
NOD1-203ENST00000413433 FAM200AQ8TCP9 573 aa8.78□□□□□ -1
NOD1-203ENST00000413433 MKRN1Q9UHC7 482 aaKnown RBP8.78□□□□□ -1
NOD1-203ENST00000413433 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
NOD1-203ENST00000413433 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
NOD1-203ENST00000413433 ABCA10Q8WWZ4 1543 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 RASA1P20936 1047 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 SSFA2P28290 1259 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 ATP13A2Q9NQ11 1180 aa8.77□□□□□ -1.01
NOD1-203ENST00000413433 WRNQ14191 1432 aaPredicted RBP eCLIP8.77□□□□□ -1.01
NOD1-203ENST00000413433 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
NOD1-203ENST00000413433 ATP5J2-PTCD1G3V325 749 aa8.76□□□□□ -1.01
NOD1-203ENST00000413433 ZBTB24O43167 697 aaPredicted RBP8.76□□□□□ -1.01
NOD1-203ENST00000413433 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
NOD1-203ENST00000413433 PHLDB3Q6NSJ2 640 aa8.76□□□□□ -1.01
NOD1-203ENST00000413433 RNF19BQ6ZMZ0 732 aa8.76□□□□□ -1.01
NOD1-203ENST00000413433 MRRFQ96E11 262 aaKnown RBP8.76□□□□□ -1.01
NOD1-203ENST00000413433 BIN2Q9UBW5 565 aaPredicted RBP8.76□□□□□ -1.01
NOD1-203ENST00000413433 ERCC6L2Q5T890 1561 aa8.76□□□□□ -1.01
NOD1-203ENST00000413433 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
NOD1-203ENST00000413433 TRIM47Q96LD4 638 aa8.75□□□□□ -1.01
NOD1-203ENST00000413433 BCL2L13Q9BXK5 485 aa8.75□□□□□ -1.01
NOD1-203ENST00000413433 PRDM9Q9NQV7 894 aa8.75□□□□□ -1.01
NOD1-203ENST00000413433 WDR97A6NE52 1622 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 SNRPBP14678 240 aaKnown RBP8.74□□□□□ -1.01
NOD1-203ENST00000413433 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
NOD1-203ENST00000413433 NCOA4Q13772 614 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 LCE2CQ5TA81 110 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 DNAJC14Q6Y2X3 702 aaPredicted RBP8.74□□□□□ -1.01
NOD1-203ENST00000413433 FAM160A2Q8N612 972 aaPredicted RBP8.74□□□□□ -1.01
NOD1-203ENST00000413433 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 CLP1Q92989 425 aaKnown RBP8.74□□□□□ -1.01
NOD1-203ENST00000413433 GRIN2AQ12879 1464 aa8.74□□□□□ -1.01
NOD1-203ENST00000413433 SMPD1P17405 629 aa8.73□□□□□ -1.01
NOD1-203ENST00000413433 SERPINB4P48594 390 aa8.73□□□□□ -1.01
NOD1-203ENST00000413433 PTK7Q13308 1070 aa8.73□□□□□ -1.01
NOD1-203ENST00000413433 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
NOD1-203ENST00000413433 SNIP1Q8TAD8 396 aaKnown RBP8.73□□□□□ -1.01
NOD1-203ENST00000413433 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
NOD1-203ENST00000413433 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
NOD1-203ENST00000413433 WNT7AO00755 349 aa8.72□□□□□ -1.01
NOD1-203ENST00000413433 FMNL1O95466 1100 aaPredicted RBP8.72□□□□□ -1.01
NOD1-203ENST00000413433 BRICD5Q6PL45 260 aa8.72□□□□□ -1.01
NOD1-203ENST00000413433 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
NOD1-203ENST00000413433 SIRT1Q96EB6 747 aa8.72□□□□□ -1.01
NOD1-203ENST00000413433 PBRM1Q86U86 1689 aa8.72□□□□□ -1.01
NOD1-203ENST00000413433 LOC100996750A0A140TA64 210 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
NOD1-203ENST00000413433 HMGB1P09429 215 aaKnown RBP8.71□□□□□ -1.02
NOD1-203ENST00000413433 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 EML3Q32P44 896 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 GIPC2Q8TF65 315 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 SLC16A10Q8TF71 515 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 KRTAP4-6Q9BYQ5 205 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 PCDHB9Q9Y5E1 797 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 ABCA5Q8WWZ7 1642 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 FHAD1B1AJZ9 1412 aa8.71□□□□□ -1.02
NOD1-203ENST00000413433 CEP170Q5SW79 1584 aa8.7□□□□□ -1.02
NOD1-203ENST00000413433 ZNF16P17020 682 aaPredicted RBP8.7□□□□□ -1.02
NOD1-203ENST00000413433 CTHP32929 405 aa8.7□□□□□ -1.02
NOD1-203ENST00000413433 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
NOD1-203ENST00000413433 USB1Q9BQ65 265 aaKnown RBP8.7□□□□□ -1.02
NOD1-203ENST00000413433 KIAA1522Q9P206 1035 aaPredicted RBP8.7□□□□□ -1.02
NOD1-203ENST00000413433 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms