RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CAMKK2Q96RR4 588 aa17.91■□□□□ 0.46
SSB-203ENST00000413002 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
SSB-203ENST00000413002 TNS1Q9HBL0 1735 aaKnown RBP17.9■□□□□ 0.46
SSB-203ENST00000413002 TATP17735 454 aaPredicted RBP17.89■□□□□ 0.45
SSB-203ENST00000413002 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
SSB-203ENST00000413002 MTHFSP49914 203 aa17.87■□□□□ 0.45
SSB-203ENST00000413002 PSDA5PKW4 1024 aaPredicted RBP17.85■□□□□ 0.45
SSB-203ENST00000413002 BCL9O00512 1426 aa17.85■□□□□ 0.45
SSB-203ENST00000413002 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
SSB-203ENST00000413002 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
SSB-203ENST00000413002 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
SSB-203ENST00000413002 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
SSB-203ENST00000413002 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
SSB-203ENST00000413002 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
SSB-203ENST00000413002 CYP27B1O15528 508 aa17.82■□□□□ 0.44
SSB-203ENST00000413002 IL13P35225 146 aa17.82■□□□□ 0.44
SSB-203ENST00000413002 NCAPD2Q15021 1401 aa17.81■□□□□ 0.44
SSB-203ENST00000413002 R3HDM1Q15032 1099 aaKnown RBP17.81■□□□□ 0.44
SSB-203ENST00000413002 PROM2Q8N271 834 aa17.81■□□□□ 0.44
SSB-203ENST00000413002 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
SSB-203ENST00000413002 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
SSB-203ENST00000413002 PLSCR1O15162 318 aa17.8■□□□□ 0.44
SSB-203ENST00000413002 SHANK3Q9BYB0 1731 aa17.8■□□□□ 0.44
SSB-203ENST00000413002 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
SSB-203ENST00000413002 SULT6B1Q6IMI4 303 aa17.79■□□□□ 0.44
SSB-203ENST00000413002 SPG7Q9UQ90 795 aa17.79■□□□□ 0.44
SSB-203ENST00000413002 PARD3Q8TEW0 1356 aa17.79■□□□□ 0.44
SSB-203ENST00000413002 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
SSB-203ENST00000413002 TXNRD1Q16881 649 aa17.78■□□□□ 0.44
SSB-203ENST00000413002 HMOX1P09601 288 aa17.77■□□□□ 0.44
SSB-203ENST00000413002 NHSQ6T4R5 1651 aa17.77■□□□□ 0.43
SSB-203ENST00000413002 DIAPH1O60610 1272 aaKnown RBP17.76■□□□□ 0.43
SSB-203ENST00000413002 KAT6BQ8WYB5 2073 aa17.76■□□□□ 0.43
SSB-203ENST00000413002 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
SSB-203ENST00000413002 KCNQ4P56696 695 aa17.75■□□□□ 0.43
SSB-203ENST00000413002 ANO8Q9HCE9 1232 aaPredicted RBP17.75■□□□□ 0.43
SSB-203ENST00000413002 PHKG2P15735 406 aa17.74■□□□□ 0.43
SSB-203ENST00000413002 NBPF14Q5TI25 921 aa17.74■□□□□ 0.43
SSB-203ENST00000413002 MPRIPQ6WCQ1 1025 aa17.74■□□□□ 0.43
SSB-203ENST00000413002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.74■□□□□ 0.432e-7■■■□□ 15.7
SSB-203ENST00000413002 DOT1LQ8TEK3 1739 aa17.74■□□□□ 0.43
SSB-203ENST00000413002 RREB1Q92766 1687 aa17.74■□□□□ 0.43
SSB-203ENST00000413002 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
SSB-203ENST00000413002 PLEKHO1Q53GL0 409 aaPredicted RBP17.73■□□□□ 0.43
SSB-203ENST00000413002 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 BTAF1O14981 1849 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 ZNF530Q6P9A1 599 aaPredicted RBP17.72■□□□□ 0.43
SSB-203ENST00000413002 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 SRCAPQ6ZRS2 3230 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
SSB-203ENST00000413002 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
SSB-203ENST00000413002 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
SSB-203ENST00000413002 KDRP35968 1356 aa17.7■□□□□ 0.42
SSB-203ENST00000413002 PIGBQ92521 554 aa17.69■□□□□ 0.42
SSB-203ENST00000413002 CFAP53Q96M91 514 aa17.69■□□□□ 0.42
SSB-203ENST00000413002 AMOTQ4VCS5 1084 aa17.68■□□□□ 0.42
SSB-203ENST00000413002 PDGFDQ9GZP0 370 aaPredicted RBP17.68■□□□□ 0.42
SSB-203ENST00000413002 TOGARAM1Q9Y4F4 1720 aa17.67■□□□□ 0.42
SSB-203ENST00000413002 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
SSB-203ENST00000413002 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
SSB-203ENST00000413002 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
SSB-203ENST00000413002 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
SSB-203ENST00000413002 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
SSB-203ENST00000413002 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
SSB-203ENST00000413002 CCNL1Q9UK58 526 aaPredicted RBP17.66■□□□□ 0.42
SSB-203ENST00000413002 SLC15A2Q16348 729 aa17.65■□□□□ 0.42
SSB-203ENST00000413002 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
SSB-203ENST00000413002 DCAF5Q96JK2 942 aa17.64■□□□□ 0.41
SSB-203ENST00000413002 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
SSB-203ENST00000413002 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
SSB-203ENST00000413002 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.41
SSB-203ENST00000413002 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
SSB-203ENST00000413002 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.413e-12■□□□□ 10
SSB-203ENST00000413002 SLC27A3Q5K4L6 730 aa17.63■□□□□ 0.41
SSB-203ENST00000413002 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
SSB-203ENST00000413002 LGR6Q9HBX8 967 aa17.62■□□□□ 0.41
SSB-203ENST00000413002 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
SSB-203ENST00000413002 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
SSB-203ENST00000413002 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
SSB-203ENST00000413002 CABP4P57796 275 aa17.61■□□□□ 0.41
SSB-203ENST00000413002 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
SSB-203ENST00000413002 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
SSB-203ENST00000413002 ATG3Q9NT62 314 aa17.61■□□□□ 0.41
SSB-203ENST00000413002 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 ZBTB7AO95365 584 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 NFATC2IPQ8NCF5 419 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
SSB-203ENST00000413002 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 ITGB4P16144 1822 aa17.6■□□□□ 0.41
SSB-203ENST00000413002 RALBP1Q15311 655 aa17.59■□□□□ 0.41
SSB-203ENST00000413002 PAPPAQ13219 1627 aa17.58■□□□□ 0.41
SSB-203ENST00000413002 TFCP2L1Q9NZI6 479 aa17.58■□□□□ 0.4
SSB-203ENST00000413002 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
SSB-203ENST00000413002 LOC102724428A0A0B4J2F2 783 aa17.57■□□□□ 0.4
SSB-203ENST00000413002 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
SSB-203ENST00000413002 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
SSB-203ENST00000413002 SIK1P57059 783 aa17.57■□□□□ 0.4
SSB-203ENST00000413002 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms