RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
SMARCAL1-204ENST00000412913 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
SMARCAL1-204ENST00000412913 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
SMARCAL1-204ENST00000412913 NFE2L2Q16236 605 aa13.97□□□□□ -0.17
SMARCAL1-204ENST00000412913 MEX3CQ5U5Q3 659 aaKnown RBP13.97□□□□□ -0.17
SMARCAL1-204ENST00000412913 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
SMARCAL1-204ENST00000412913 PNNQ9H307 717 aaKnown RBP13.97□□□□□ -0.17
SMARCAL1-204ENST00000412913 RRP7AQ9Y3A4 280 aaKnown RBP13.97□□□□□ -0.17
SMARCAL1-204ENST00000412913 MRC1P22897 1456 aa13.96□□□□□ -0.17
SMARCAL1-204ENST00000412913 EVA1CP58658 441 aa13.96□□□□□ -0.17
SMARCAL1-204ENST00000412913 VPS72Q15906 364 aa13.96□□□□□ -0.17
SMARCAL1-204ENST00000412913 MTHFSDQ2M296 383 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-204ENST00000412913 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
SMARCAL1-204ENST00000412913 KDM3BQ7LBC6 1761 aa13.96□□□□□ -0.18
SMARCAL1-204ENST00000412913 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
SMARCAL1-204ENST00000412913 USP21Q9UK80 565 aa13.95□□□□□ -0.18
SMARCAL1-204ENST00000412913 TRIM35Q9UPQ4 493 aa13.95□□□□□ -0.18
SMARCAL1-204ENST00000412913 MAP3K5Q99683 1374 aa13.95□□□□□ -0.18
SMARCAL1-204ENST00000412913 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
SMARCAL1-204ENST00000412913 KDM6AO15550 1401 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-204ENST00000412913 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
SMARCAL1-204ENST00000412913 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
SMARCAL1-204ENST00000412913 IL2RBP14784 551 aa13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 TATP17735 454 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 NGEFQ8N5V2 710 aa13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 GAS2L2Q8NHY3 880 aa13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 SALL2Q9Y467 1007 aaPredicted RBP13.93□□□□□ -0.18
SMARCAL1-204ENST00000412913 ITGB4P16144 1822 aa13.92□□□□□ -0.18
SMARCAL1-204ENST00000412913 BARGINQ6ZT62 677 aa13.92□□□□□ -0.18
SMARCAL1-204ENST00000412913 WWC1Q8IX03 1113 aa13.92□□□□□ -0.18
SMARCAL1-204ENST00000412913 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.92□□□□□ -0.185e-8■□□□□ 10.1
SMARCAL1-204ENST00000412913 NEFMP07197 916 aa13.91□□□□□ -0.18
SMARCAL1-204ENST00000412913 RIPK4P57078 832 aa13.91□□□□□ -0.18
SMARCAL1-204ENST00000412913 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
SMARCAL1-204ENST00000412913 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
SMARCAL1-204ENST00000412913 CEMIPQ8WUJ3 1361 aa13.91□□□□□ -0.18
SMARCAL1-204ENST00000412913 PLEKHO1Q53GL0 409 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-204ENST00000412913 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
SMARCAL1-204ENST00000412913 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.19
SMARCAL1-204ENST00000412913 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.19
SMARCAL1-204ENST00000412913 UBR2Q8IWV8 1755 aa13.89□□□□□ -0.19
SMARCAL1-204ENST00000412913 CYP27B1O15528 508 aa13.89□□□□□ -0.19
SMARCAL1-204ENST00000412913 PHKG2P15735 406 aa13.89□□□□□ -0.19
SMARCAL1-204ENST00000412913 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-204ENST00000412913 TRPC5Q9UL62 973 aaPredicted RBP13.89□□□□□ -0.19
SMARCAL1-204ENST00000412913 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 SPINK5Q9NQ38 1064 aaPredicted RBP13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 SPG7Q9UQ90 795 aa13.88□□□□□ -0.19
SMARCAL1-204ENST00000412913 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 ILDR1Q86SU0 546 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
SMARCAL1-204ENST00000412913 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 FAM98CQ17RN3 349 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 MCM10Q7L590 875 aa13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 WDR63Q8IWG1 891 aa13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 IL16Q14005 1332 aa13.86□□□□□ -0.19
SMARCAL1-204ENST00000412913 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
SMARCAL1-204ENST00000412913 IL17REQ8NFR9 667 aa13.85□□□□□ -0.19
SMARCAL1-204ENST00000412913 C5P01031 1676 aa13.85□□□□□ -0.19
SMARCAL1-204ENST00000412913 RGS12O14924 1447 aa13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 RNMTO43148 476 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 SLFN5Q08AF3 891 aa13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 TRMT2AQ8IZ69 625 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-204ENST00000412913 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.19
SMARCAL1-204ENST00000412913 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 NKX1-1Q15270 411 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 DUSP27Q5VZP5 1158 aa13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 ZNF772Q68DY9 489 aaPredicted RBP13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 MPRIPQ6WCQ1 1025 aa13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 LGR6Q9HBX8 967 aa13.83□□□□□ -0.2
SMARCAL1-204ENST00000412913 CICQ96RK0 1608 aaPredicted RBP13.82□□□□□ -0.2
SMARCAL1-204ENST00000412913 DDB1Q16531 1140 aa13.82□□□□□ -0.2
SMARCAL1-204ENST00000412913 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
SMARCAL1-204ENST00000412913 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
SMARCAL1-204ENST00000412913 BTAF1O14981 1849 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 E9PSI1 815 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 EXOC5O00471 708 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 MARCH10Q8NA82 808 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 BCL9O00512 1426 aa13.81□□□□□ -0.2
SMARCAL1-204ENST00000412913 KCPQ6ZWJ8 1503 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms