RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
SMPD4-203ENST00000412570 PIK3C2AO00443 1686 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 RLBP1P12271 317 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 TATP17735 454 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-203ENST00000412570 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
SMPD4-203ENST00000412570 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
SMPD4-203ENST00000412570 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SMPD4-203ENST00000412570 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
SMPD4-203ENST00000412570 F6X3S4 739 aa12.49□□□□□ -0.41
SMPD4-203ENST00000412570 RGS3P49796 1198 aa12.49□□□□□ -0.41
SMPD4-203ENST00000412570 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
SMPD4-203ENST00000412570 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-203ENST00000412570 NFATC2IPQ8NCF5 419 aa12.48□□□□□ -0.41
SMPD4-203ENST00000412570 ADGRB2O60241 1585 aa12.48□□□□□ -0.41
SMPD4-203ENST00000412570 INSRP06213 1382 aa12.48□□□□□ -0.41
SMPD4-203ENST00000412570 PLEKHO1Q53GL0 409 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-203ENST00000412570 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
SMPD4-203ENST00000412570 GNAI1P63096 354 aa12.47□□□□□ -0.41
SMPD4-203ENST00000412570 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
SMPD4-203ENST00000412570 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
SMPD4-203ENST00000412570 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
SMPD4-203ENST00000412570 CDK12Q9NYV4 1490 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-203ENST00000412570 HSPA1LP34931 641 aa12.47□□□□□ -0.41
SMPD4-203ENST00000412570 BTBD11A6QL63 1104 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 KCNQ4P56696 695 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
SMPD4-203ENST00000412570 MYL6BP14649 208 aa12.46□□□□□ -0.42
SMPD4-203ENST00000412570 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-203ENST00000412570 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-203ENST00000412570 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
SMPD4-203ENST00000412570 SOS2Q07890 1332 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-203ENST00000412570 AKAP12Q02952 1782 aa12.45□□□□□ -0.42
SMPD4-203ENST00000412570 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
SMPD4-203ENST00000412570 G2E3Q7L622 706 aa12.44□□□□□ -0.42
SMPD4-203ENST00000412570 JARID2Q92833 1246 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-203ENST00000412570 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
SMPD4-203ENST00000412570 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
SMPD4-203ENST00000412570 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
SMPD4-203ENST00000412570 EP400Q96L91 3159 aa12.43□□□□□ -0.42
SMPD4-203ENST00000412570 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
SMPD4-203ENST00000412570 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 VAMP4O75379 141 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 TRIM27P14373 513 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 CABP4P57796 275 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 FKBP5Q13451 457 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-203ENST00000412570 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 CYP27B1O15528 508 aa12.42□□□□□ -0.42
SMPD4-203ENST00000412570 ZKSCAN2Q63HK3 967 aa12.41□□□□□ -0.42
SMPD4-203ENST00000412570 PHAXQ9H814 394 aaKnown RBP12.41□□□□□ -0.42
SMPD4-203ENST00000412570 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
SMPD4-203ENST00000412570 USP19O94966 1318 aa12.41□□□□□ -0.42
SMPD4-203ENST00000412570 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-203ENST00000412570 ZCRB1Q8TBF4 217 aaKnown RBP12.41□□□□□ -0.42
SMPD4-203ENST00000412570 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
SMPD4-203ENST00000412570 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
SMPD4-203ENST00000412570 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
SMPD4-203ENST00000412570 DZIP1LQ8IYY4 767 aaKnown RBP12.4□□□□□ -0.42
SMPD4-203ENST00000412570 SMIM5Q71RC9 77 aa12.4□□□□□ -0.42
SMPD4-203ENST00000412570 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
SMPD4-203ENST00000412570 RNMTO43148 476 aaKnown RBP12.39□□□□□ -0.43
SMPD4-203ENST00000412570 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 MED1Q15648 1581 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-203ENST00000412570 IL2RBP14784 551 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 TRMT2AQ8IZ69 625 aaKnown RBP12.39□□□□□ -0.43
SMPD4-203ENST00000412570 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
SMPD4-203ENST00000412570 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
SMPD4-203ENST00000412570 PXDNQ92626 1479 aa12.38□□□□□ -0.43
SMPD4-203ENST00000412570 CHPF2Q9P2E5 772 aa12.38□□□□□ -0.43
SMPD4-203ENST00000412570 NRKQ7Z2Y5 1582 aa12.38□□□□□ -0.43
SMPD4-203ENST00000412570 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
SMPD4-203ENST00000412570 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 CHL1O00533 1208 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 PROSER3Q2NL68 480 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 AKAP4Q5JQC9 854 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
SMPD4-203ENST00000412570 PHKG2P15735 406 aa12.37□□□□□ -0.43
SMPD4-203ENST00000412570 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-203ENST00000412570 LTN1O94822 1766 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 MEGF6O75095 1541 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 ANKRD26Q9UPS8 1709 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 EXOC5O00471 708 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 IGHDP01880 384 aa12.36□□□□□ -0.43
SMPD4-203ENST00000412570 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 DCCP43146 1447 aa12.35□□□□□ -0.43
SMPD4-203ENST00000412570 PRIM1P49642 420 aaKnown RBP12.35□□□□□ -0.43
SMPD4-203ENST00000412570 USP21Q9UK80 565 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms