RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 SUDS3Q9H7L9 328 aaPredicted RBP12.57□□□□□ -0.4
CPEB3-202ENST00000412050 COG6Q9Y2V7 657 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 GBP7Q8N8V2 638 aaPredicted RBP12.57□□□□□ -0.4
CPEB3-202ENST00000412050 ZSCAN32Q9NX65 697 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 JAKMIP3Q5VZ66 844 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 CACYBPQ9HB71 228 aaKnown RBP12.57□□□□□ -0.4
CPEB3-202ENST00000412050 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 NUP133Q8WUM0 1156 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
CPEB3-202ENST00000412050 DIAPH1O60610 1272 aaKnown RBP12.56□□□□□ -0.4
CPEB3-202ENST00000412050 SLC4A1P02730 911 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 DNA2P51530 1060 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 MXRA7P84157 204 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 LRRC23Q53EV4 343 aaPredicted RBP12.56□□□□□ -0.4
CPEB3-202ENST00000412050 GOLGA4Q13439 2230 aaKnown RBP12.56□□□□□ -0.4
CPEB3-202ENST00000412050 BICDL2A1A5D9 508 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 CEP120Q8N960 986 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 LIG1P18858 919 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
CPEB3-202ENST00000412050 CCP110O43303 1012 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 TMEM259Q4ZIN3 620 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 FAM180AQ6UWF9 173 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 CETN2P41208 172 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 HAUS7Q99871 368 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
CPEB3-202ENST00000412050 CNTROBQ8N137 903 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 XRCC6P12956 609 aaKnown RBP eCLIP12.55□□□□□ -0.4
CPEB3-202ENST00000412050 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
CPEB3-202ENST00000412050 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
CPEB3-202ENST00000412050 TMCO3Q6UWJ1 677 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
CPEB3-202ENST00000412050 PKD2Q13563 968 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 TRERF1Q96PN7 1200 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
CPEB3-202ENST00000412050 TRMT1LQ7Z2T5 733 aaKnown RBP12.54□□□□□ -0.4
CPEB3-202ENST00000412050 PSMA5P28066 241 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 SNX16P57768 344 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
CPEB3-202ENST00000412050 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 CROCCQ5TZA2 2017 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 ACBD5Q5T8D3 534 aaPredicted RBP12.53□□□□□ -0.4
CPEB3-202ENST00000412050 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
CPEB3-202ENST00000412050 PPP4R3AQ6IN85 833 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 CCDC69A6NI79 296 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 IFFO1Q0D2I5 559 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
CPEB3-202ENST00000412050 TSPYL4Q9UJ04 414 aa12.53□□□□□ -0.4
CPEB3-202ENST00000412050 ME1P48163 572 aa12.52□□□□□ -0.4
CPEB3-202ENST00000412050 C6orf163Q5TEZ5 329 aa12.52□□□□□ -0.4
CPEB3-202ENST00000412050 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.4
CPEB3-202ENST00000412050 TAF12Q16514 161 aa12.52□□□□□ -0.4
CPEB3-202ENST00000412050 FIBPO43427 364 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 SEPT14Q6ZU15 432 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 MAP4K4O95819 1239 aaPredicted RBP12.52□□□□□ -0.41
CPEB3-202ENST00000412050 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 CWC25Q9NXE8 425 aaPredicted RBP12.52□□□□□ -0.41
CPEB3-202ENST00000412050 IQCEQ6IPM2 695 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 IKBKGQ9Y6K9 419 aa12.52□□□□□ -0.41
CPEB3-202ENST00000412050 FKBP15Q5T1M5 1219 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 MKL2Q9ULH7 1088 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 HMOX1P09601 288 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 MICALCLQ6ZW33 695 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
CPEB3-202ENST00000412050 ZNF397Q8NF99 534 aaPredicted RBP12.51□□□□□ -0.41
CPEB3-202ENST00000412050 FSD1Q9BTV5 496 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
CPEB3-202ENST00000412050 LRRC43Q8N309 656 aa12.51□□□□□ -0.41
CPEB3-202ENST00000412050 GMNNO75496 209 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 ROCK1Q13464 1354 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 STK38Q15208 465 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.5□□□□□ -0.41
CPEB3-202ENST00000412050 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 NCAPGQ9BPX3 1015 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 POLD1P28340 1107 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
CPEB3-202ENST00000412050 MAP3K7CLP57077 242 aa12.5□□□□□ -0.41
CPEB3-202ENST00000412050 BAG1Q99933 345 aaPredicted RBP12.5□□□□□ -0.41
CPEB3-202ENST00000412050 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
CPEB3-202ENST00000412050 CCDC96Q2M329 555 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms