RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 PCDHB15Q9Y5E8 787 aa26.35■■□□□ 1.81
ITSN2-205ENST00000412011 USP19O94966 1318 aa26.35■■□□□ 1.81
ITSN2-205ENST00000412011 LMOD2Q6P5Q4 547 aa26.34■■□□□ 1.81
ITSN2-205ENST00000412011 ZBTB7CA1YPR0 619 aa26.32■■□□□ 1.8
ITSN2-205ENST00000412011 RTF1Q92541 710 aaKnown RBP26.32■■□□□ 1.8
ITSN2-205ENST00000412011 LRRC37A3O60309 1634 aa26.32■■□□□ 1.8
ITSN2-205ENST00000412011 ARHGEF25Q86VW2 580 aa26.32■■□□□ 1.8
ITSN2-205ENST00000412011 TMEM57Q8N5G2 664 aa26.32■■□□□ 1.8
ITSN2-205ENST00000412011 USHBP1Q8N6Y0 703 aa26.31■■□□□ 1.8
ITSN2-205ENST00000412011 ITPRIPQ8IWB1 547 aa26.3■■□□□ 1.8
ITSN2-205ENST00000412011 DDX19BQ9UMR2 479 aa26.3■■□□□ 1.8
ITSN2-205ENST00000412011 CADPS2Q86UW7 1296 aa26.3■■□□□ 1.8
ITSN2-205ENST00000412011 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
ITSN2-205ENST00000412011 KIAA0232Q92628 1395 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 PDE4AP27815 886 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 NBPF6Q5VWK0 638 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 ARHGAP45Q92619 1136 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 NBPF4Q96M43 638 aa26.29■■□□□ 1.8
ITSN2-205ENST00000412011 MSH6P52701 1360 aa26.28■■□□□ 1.8
ITSN2-205ENST00000412011 GNAT3A8MTJ3 354 aa26.27■■□□□ 1.8
ITSN2-205ENST00000412011 KRT24Q2M2I5 525 aa26.27■■□□□ 1.8
ITSN2-205ENST00000412011 MED1Q15648 1581 aaPredicted RBP26.26■■□□□ 1.79
ITSN2-205ENST00000412011 BACH2Q9BYV9 841 aa26.26■■□□□ 1.79
ITSN2-205ENST00000412011 DDX17Q92841 729 aaKnown RBP26.26■■□□□ 1.79
ITSN2-205ENST00000412011 MAP3K5Q99683 1374 aa26.26■■□□□ 1.79
ITSN2-205ENST00000412011 RGPD5Q99666 1765 aa26.25■■□□□ 1.79
ITSN2-205ENST00000412011 MIS18AQ9NYP9 233 aa26.24■■□□□ 1.79
ITSN2-205ENST00000412011 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
ITSN2-205ENST00000412011 RWDD1Q9H446 243 aaPredicted RBP26.23■■□□□ 1.79
ITSN2-205ENST00000412011 TSPYL4Q9UJ04 414 aa26.23■■□□□ 1.79
ITSN2-205ENST00000412011 LRRC59Q96AG4 307 aaKnown RBP26.23■■□□□ 1.79
ITSN2-205ENST00000412011 RGS3P49796 1198 aa26.22■■□□□ 1.79
ITSN2-205ENST00000412011 ZBTB40Q9NUA8 1239 aa26.22■■□□□ 1.79
ITSN2-205ENST00000412011 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
ITSN2-205ENST00000412011 NCAPD2Q15021 1401 aa26.21■■□□□ 1.79
ITSN2-205ENST00000412011 NPHP3Q7Z494 1330 aa26.21■■□□□ 1.79
ITSN2-205ENST00000412011 ABCC4O15439 1325 aa26.21■■□□□ 1.79
ITSN2-205ENST00000412011 IL17REQ8NFR9 667 aa26.2■■□□□ 1.78
ITSN2-205ENST00000412011 ANKRD24Q8TF21 1146 aa26.19■■□□□ 1.78
ITSN2-205ENST00000412011 PXDNQ92626 1479 aa26.19■■□□□ 1.78
ITSN2-205ENST00000412011 AXIN2Q9Y2T1 843 aa26.19■■□□□ 1.78
ITSN2-205ENST00000412011 API5Q9BZZ5 524 aaKnown RBP26.18■■□□□ 1.78
ITSN2-205ENST00000412011 TNS3Q68CZ2 1445 aa26.17■■□□□ 1.78
ITSN2-205ENST00000412011 LMO7Q8WWI1 1683 aa26.17■■□□□ 1.78
ITSN2-205ENST00000412011 ZNF335Q9H4Z2 1342 aaPredicted RBP26.16■■□□□ 1.78
ITSN2-205ENST00000412011 ZC3H6P61129 1189 aaKnown RBP26.16■■□□□ 1.78
ITSN2-205ENST00000412011 HDAC1Q13547 482 aaPredicted RBP26.16■■□□□ 1.78
ITSN2-205ENST00000412011 CRYBG1Q9Y4K1 1723 aa26.16■■□□□ 1.78
ITSN2-205ENST00000412011 ZBTB7BO15156 539 aaPredicted RBP26.14■■□□□ 1.77
ITSN2-205ENST00000412011 COL18A1P39060 1754 aa26.14■■□□□ 1.77
ITSN2-205ENST00000412011 VIRMAQ69YN4 1812 aaKnown RBP26.13■■□□□ 1.77
ITSN2-205ENST00000412011 PDZRN3Q9UPQ7 1066 aa26.13■■□□□ 1.77
ITSN2-205ENST00000412011 MSH5O43196 834 aa26.13■■□□□ 1.77
ITSN2-205ENST00000412011 TAF7Q15545 349 aaPredicted RBP26.13■■□□□ 1.77
ITSN2-205ENST00000412011 BABAM1Q9NWV8 329 aa26.13■■□□□ 1.77
ITSN2-205ENST00000412011 CEMIPQ8WUJ3 1361 aa26.12■■□□□ 1.77
ITSN2-205ENST00000412011 SPATA31A3Q5VYP0 1347 aa26.12■■□□□ 1.77
ITSN2-205ENST00000412011 RGS12O14924 1447 aa26.12■■□□□ 1.77
ITSN2-205ENST00000412011 BRINP3Q76B58 766 aa26.11■■□□□ 1.77
ITSN2-205ENST00000412011 CHMP4BQ9H444 224 aaKnown RBP26.11■■□□□ 1.77
ITSN2-205ENST00000412011 FAM161AQ3B820 660 aa26.11■■□□□ 1.77
ITSN2-205ENST00000412011 PLEKHO1Q53GL0 409 aaPredicted RBP26.11■■□□□ 1.77
ITSN2-205ENST00000412011 ERBB3P21860 1342 aa26.1■■□□□ 1.77
ITSN2-205ENST00000412011 C8orf34Q49A92 452 aa26.1■■□□□ 1.77
ITSN2-205ENST00000412011 ZNF530Q6P9A1 599 aaPredicted RBP26.09■■□□□ 1.77
ITSN2-205ENST00000412011 FAM208AQ9UK61 1670 aaKnown RBP26.09■■□□□ 1.77
ITSN2-205ENST00000412011 AMOTQ4VCS5 1084 aa26.08■■□□□ 1.77
ITSN2-205ENST00000412011 AKAP4Q5JQC9 854 aa26.08■■□□□ 1.77
ITSN2-205ENST00000412011 CABLES1Q8TDN4 633 aa26.08■■□□□ 1.77
ITSN2-205ENST00000412011 PTPRCP08575 1304 aa26.08■■□□□ 1.77
ITSN2-205ENST00000412011 ANP32AP39687 249 aaKnown RBP26.08■■□□□ 1.77
ITSN2-205ENST00000412011 LGR6Q9HBX8 967 aa26.08■■□□□ 1.77
ITSN2-205ENST00000412011 SLC4A2P04920 1241 aa26.07■■□□□ 1.76
ITSN2-205ENST00000412011 CACNA1FO60840 1977 aa26.07■■□□□ 1.76
ITSN2-205ENST00000412011 KDM3BQ7LBC6 1761 aa26.07■■□□□ 1.76
ITSN2-205ENST00000412011 INTS3Q68E01 1043 aaKnown RBP26.07■■□□□ 1.76
ITSN2-205ENST00000412011 SMC5Q8IY18 1101 aa26.05■■□□□ 1.76
ITSN2-205ENST00000412011 ABCC6O95255 1503 aa26.05■■□□□ 1.76
ITSN2-205ENST00000412011 SLAIN2Q9P270 581 aa26.05■■□□□ 1.76
ITSN2-205ENST00000412011 SOS1Q07889 1333 aaPredicted RBP26.05■■□□□ 1.76
ITSN2-205ENST00000412011 C1orf115Q9H7X2 142 aa26.03■■□□□ 1.76
ITSN2-205ENST00000412011 G2E3Q7L622 706 aa26.03■■□□□ 1.76
ITSN2-205ENST00000412011 C1orf141Q5JVX7 400 aa26.02■■□□□ 1.76
ITSN2-205ENST00000412011 CCDC30Q5VVM6 783 aa26.01■■□□□ 1.75
ITSN2-205ENST00000412011 MPRIPQ6WCQ1 1025 aa26.01■■□□□ 1.75
ITSN2-205ENST00000412011 NPM2Q86SE8 214 aaKnown RBP26.01■■□□□ 1.75
ITSN2-205ENST00000412011 CPDO75976 1380 aa26■■□□□ 1.75
ITSN2-205ENST00000412011 STK31Q9BXU1 1019 aa26■■□□□ 1.75
ITSN2-205ENST00000412011 OVOS2A0A0G2JMS6 1433 aa26■■□□□ 1.75
ITSN2-205ENST00000412011 RNMTO43148 476 aaKnown RBP26■■□□□ 1.75
ITSN2-205ENST00000412011 CHRNA2Q15822 529 aa26■■□□□ 1.75
ITSN2-205ENST00000412011 SOS2Q07890 1332 aaPredicted RBP25.99■■□□□ 1.75
ITSN2-205ENST00000412011 NLRP2Q9NX02 1062 aa25.99■■□□□ 1.75
ITSN2-205ENST00000412011 ADAMTS7Q9UKP4 1686 aa25.99■■□□□ 1.75
ITSN2-205ENST00000412011 SIPA1L3O60292 1781 aaPredicted RBP25.98■■□□□ 1.75
ITSN2-205ENST00000412011 TEFQ10587 303 aa25.98■■□□□ 1.75
ITSN2-205ENST00000412011 IPO9Q96P70 1041 aaKnown RBP25.97■■□□□ 1.75
ITSN2-205ENST00000412011 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
ITSN2-205ENST00000412011 SIRT2Q8IXJ6 389 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms