RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
MRPL48-204ENST00000411840 MYOM1P52179 1685 aa12.8□□□□□ -0.36
MRPL48-204ENST00000411840 ZCRB1Q8TBF4 217 aaKnown RBP12.79□□□□□ -0.36
MRPL48-204ENST00000411840 KCNQ4P56696 695 aa12.78□□□□□ -0.36
MRPL48-204ENST00000411840 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
MRPL48-204ENST00000411840 LTN1O94822 1766 aa12.77□□□□□ -0.36
MRPL48-204ENST00000411840 FYB1O15117 783 aa12.77□□□□□ -0.37
MRPL48-204ENST00000411840 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
MRPL48-204ENST00000411840 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.37
MRPL48-204ENST00000411840 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
MRPL48-204ENST00000411840 TFCP2L1Q9NZI6 479 aa12.77□□□□□ -0.37
MRPL48-204ENST00000411840 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
MRPL48-204ENST00000411840 RRS1Q15050 365 aaKnown RBP12.76□□□□□ -0.37
MRPL48-204ENST00000411840 ZNF784Q8NCA9 323 aaPredicted RBP12.76□□□□□ -0.37
MRPL48-204ENST00000411840 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
MRPL48-204ENST00000411840 PAPPAQ13219 1627 aa12.76□□□□□ -0.37
MRPL48-204ENST00000411840 POLD1P28340 1107 aa12.75□□□□□ -0.37
MRPL48-204ENST00000411840 TMF1P82094 1093 aa12.75□□□□□ -0.37
MRPL48-204ENST00000411840 PNPLA7Q6ZV29 1317 aa12.75□□□□□ -0.37
MRPL48-204ENST00000411840 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
MRPL48-204ENST00000411840 GPR162Q16538 588 aa12.74□□□□□ -0.37
MRPL48-204ENST00000411840 USHBP1Q8N6Y0 703 aa12.74□□□□□ -0.37
MRPL48-204ENST00000411840 BTAF1O14981 1849 aa12.74□□□□□ -0.37
MRPL48-204ENST00000411840 RTL1A6NKG5 1358 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 NSD2O96028 1365 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
MRPL48-204ENST00000411840 CCNL1Q9UK58 526 aaPredicted RBP12.73□□□□□ -0.37
MRPL48-204ENST00000411840 MEGF6O75095 1541 aa12.72□□□□□ -0.37
MRPL48-204ENST00000411840 USP47Q96K76 1375 aa12.71□□□□□ -0.37
MRPL48-204ENST00000411840 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
MRPL48-204ENST00000411840 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.38
MRPL48-204ENST00000411840 SMG6Q86US8 1419 aaKnown RBP12.71□□□□□ -0.38
MRPL48-204ENST00000411840 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
MRPL48-204ENST00000411840 INSRP06213 1382 aa12.7□□□□□ -0.38
MRPL48-204ENST00000411840 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
MRPL48-204ENST00000411840 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
MRPL48-204ENST00000411840 CARD14Q9BXL6 1004 aa12.7□□□□□ -0.38
MRPL48-204ENST00000411840 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
MRPL48-204ENST00000411840 NLGN2Q8NFZ4 835 aa12.69□□□□□ -0.38
MRPL48-204ENST00000411840 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
MRPL48-204ENST00000411840 FLT4P35916 1363 aa12.68□□□□□ -0.38
MRPL48-204ENST00000411840 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
MRPL48-204ENST00000411840 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
MRPL48-204ENST00000411840 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
MRPL48-204ENST00000411840 CYP27B1O15528 508 aa12.67□□□□□ -0.38
MRPL48-204ENST00000411840 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
MRPL48-204ENST00000411840 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
MRPL48-204ENST00000411840 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
MRPL48-204ENST00000411840 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
MRPL48-204ENST00000411840 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
MRPL48-204ENST00000411840 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
MRPL48-204ENST00000411840 C1QTNF8P60827 252 aa12.65□□□□□ -0.38
MRPL48-204ENST00000411840 FLAD1Q8NFF5 587 aa12.65□□□□□ -0.38
MRPL48-204ENST00000411840 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
MRPL48-204ENST00000411840 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
MRPL48-204ENST00000411840 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
MRPL48-204ENST00000411840 LY75O60449 1722 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 QSER1Q2KHR3 1735 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 ATXN8OSP0DMR3 200 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■■□□ 17.8
MRPL48-204ENST00000411840 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
MRPL48-204ENST00000411840 PIGBQ92521 554 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
MRPL48-204ENST00000411840 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 RGPD2P0DJD1 1756 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
MRPL48-204ENST00000411840 AK7Q96M32 723 aa12.61□□□□□ -0.39
MRPL48-204ENST00000411840 EYA1Q99502 592 aa12.61□□□□□ -0.39
MRPL48-204ENST00000411840 TIMELESSQ9UNS1 1208 aa12.61□□□□□ -0.39
MRPL48-204ENST00000411840 GIGYF1O75420 1035 aaPredicted RBP12.6□□□□□ -0.39
MRPL48-204ENST00000411840 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
MRPL48-204ENST00000411840 AMIGO3Q86WK7 504 aa12.6□□□□□ -0.39
MRPL48-204ENST00000411840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
MRPL48-204ENST00000411840 POLKQ9UBT6 870 aa12.6□□□□□ -0.39
MRPL48-204ENST00000411840 PHF14O94880 888 aa12.59□□□□□ -0.39
MRPL48-204ENST00000411840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.58□□□□□ -0.4
MRPL48-204ENST00000411840 LOC102724428A0A0B4J2F2 783 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 PHKG2P15735 406 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
MRPL48-204ENST00000411840 SIK1P57059 783 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 NCAPD2Q15021 1401 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 POLR3GLQ9BT43 218 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 ASAP1Q9ULH1 1129 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
MRPL48-204ENST00000411840 SSFA2P28290 1259 aa12.57□□□□□ -0.4
MRPL48-204ENST00000411840 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
MRPL48-204ENST00000411840 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
MRPL48-204ENST00000411840 ATP6V1AP38606 617 aa12.56□□□□□ -0.4
MRPL48-204ENST00000411840 ITPK1Q13572 414 aa12.56□□□□□ -0.4
MRPL48-204ENST00000411840 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
MRPL48-204ENST00000411840 C5P01031 1676 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms