RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 APBA3O96018 575 aa16.19■□□□□ 0.18
NEDD1-202ENST00000411739 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
NEDD1-202ENST00000411739 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
NEDD1-202ENST00000411739 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
NEDD1-202ENST00000411739 HMOX1P09601 288 aa16.17■□□□□ 0.18
NEDD1-202ENST00000411739 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
NEDD1-202ENST00000411739 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
NEDD1-202ENST00000411739 BAG6P46379 1132 aa16.16■□□□□ 0.18
NEDD1-202ENST00000411739 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
NEDD1-202ENST00000411739 U2SURPO15042 1029 aaKnown RBP16.15■□□□□ 0.18
NEDD1-202ENST00000411739 CYP27B1O15528 508 aa16.14■□□□□ 0.18
NEDD1-202ENST00000411739 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.18
NEDD1-202ENST00000411739 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
NEDD1-202ENST00000411739 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
NEDD1-202ENST00000411739 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
NEDD1-202ENST00000411739 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
NEDD1-202ENST00000411739 TNS1Q9HBL0 1735 aaKnown RBP16.13■□□□□ 0.17
NEDD1-202ENST00000411739 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
NEDD1-202ENST00000411739 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
NEDD1-202ENST00000411739 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
NEDD1-202ENST00000411739 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
NEDD1-202ENST00000411739 CAMKK2Q96RR4 588 aa16.11■□□□□ 0.17
NEDD1-202ENST00000411739 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
NEDD1-202ENST00000411739 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
NEDD1-202ENST00000411739 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
NEDD1-202ENST00000411739 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
NEDD1-202ENST00000411739 BCL9O00512 1426 aa16.09■□□□□ 0.17
NEDD1-202ENST00000411739 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.17
NEDD1-202ENST00000411739 PHKG2P15735 406 aa16.08■□□□□ 0.16
NEDD1-202ENST00000411739 RALBP1Q15311 655 aa16.08■□□□□ 0.16
NEDD1-202ENST00000411739 ZNF530Q6P9A1 599 aaPredicted RBP16.08■□□□□ 0.16
NEDD1-202ENST00000411739 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
NEDD1-202ENST00000411739 KDRP35968 1356 aa16.07■□□□□ 0.16
NEDD1-202ENST00000411739 U2AF1L5P0DN76 240 aaPredicted RBP16.07■□□□□ 0.16
NEDD1-202ENST00000411739 U2AF1Q01081 240 aaKnown RBP eCLIP16.07■□□□□ 0.16
NEDD1-202ENST00000411739 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
NEDD1-202ENST00000411739 PROM2Q8N271 834 aa16.07■□□□□ 0.16
NEDD1-202ENST00000411739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.161e-9■■■■□ 20.2
NEDD1-202ENST00000411739 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
NEDD1-202ENST00000411739 KCNQ4P56696 695 aa16.06■□□□□ 0.16
NEDD1-202ENST00000411739 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
NEDD1-202ENST00000411739 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-202ENST00000411739 PSDA5PKW4 1024 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-202ENST00000411739 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
NEDD1-202ENST00000411739 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
NEDD1-202ENST00000411739 PLSCR1O15162 318 aa16.04■□□□□ 0.16
NEDD1-202ENST00000411739 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
NEDD1-202ENST00000411739 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
NEDD1-202ENST00000411739 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
NEDD1-202ENST00000411739 NKX1-1Q15270 411 aaPredicted RBP16.03■□□□□ 0.16
NEDD1-202ENST00000411739 TXNRD1Q16881 649 aa16.03■□□□□ 0.16
NEDD1-202ENST00000411739 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
NEDD1-202ENST00000411739 BTAF1O14981 1849 aa16.03■□□□□ 0.16
NEDD1-202ENST00000411739 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
NEDD1-202ENST00000411739 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
NEDD1-202ENST00000411739 PIGBQ92521 554 aa16.02■□□□□ 0.16
NEDD1-202ENST00000411739 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.16
NEDD1-202ENST00000411739 TOGARAM1Q9Y4F4 1720 aa16.01■□□□□ 0.15
NEDD1-202ENST00000411739 R3HDM1Q15032 1099 aaKnown RBP16.01■□□□□ 0.15
NEDD1-202ENST00000411739 LGR6Q9HBX8 967 aa16.01■□□□□ 0.15
NEDD1-202ENST00000411739 LRRC4BQ9NT99 713 aa16■□□□□ 0.15
NEDD1-202ENST00000411739 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
NEDD1-202ENST00000411739 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-202ENST00000411739 TMOD3Q9NYL9 352 aa15.99■□□□□ 0.15
NEDD1-202ENST00000411739 KDM6AO15550 1401 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-202ENST00000411739 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
NEDD1-202ENST00000411739 ASAP1Q9ULH1 1129 aa15.98■□□□□ 0.15
NEDD1-202ENST00000411739 CABP4P57796 275 aa15.97■□□□□ 0.15
NEDD1-202ENST00000411739 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
NEDD1-202ENST00000411739 ITGB4P16144 1822 aa15.97■□□□□ 0.15
NEDD1-202ENST00000411739 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
NEDD1-202ENST00000411739 NFATC2IPQ8NCF5 419 aa15.97■□□□□ 0.15
NEDD1-202ENST00000411739 FCHSD2O94868 740 aa15.96■□□□□ 0.15
NEDD1-202ENST00000411739 RREB1Q92766 1687 aa15.96■□□□□ 0.15
NEDD1-202ENST00000411739 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
NEDD1-202ENST00000411739 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
NEDD1-202ENST00000411739 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
NEDD1-202ENST00000411739 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
NEDD1-202ENST00000411739 RNMTO43148 476 aaKnown RBP15.95■□□□□ 0.14
NEDD1-202ENST00000411739 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
NEDD1-202ENST00000411739 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
NEDD1-202ENST00000411739 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
NEDD1-202ENST00000411739 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
NEDD1-202ENST00000411739 ANP32CO43423 234 aa15.94■□□□□ 0.14
NEDD1-202ENST00000411739 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
NEDD1-202ENST00000411739 CCDC146Q8IYE0 955 aa15.93■□□□□ 0.14
NEDD1-202ENST00000411739 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
NEDD1-202ENST00000411739 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
NEDD1-202ENST00000411739 ZNF827Q17R98 1081 aa15.93■□□□□ 0.14
NEDD1-202ENST00000411739 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
NEDD1-202ENST00000411739 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
NEDD1-202ENST00000411739 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
NEDD1-202ENST00000411739 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
NEDD1-202ENST00000411739 SLC39A6Q13433 755 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 MCM10Q7L590 875 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 STK32BQ9NY57 414 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 MAP3K5Q99683 1374 aa15.91■□□□□ 0.14
NEDD1-202ENST00000411739 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
NEDD1-202ENST00000411739 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms