RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
TTC39A-207ENST00000411642 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
TTC39A-207ENST00000411642 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
TTC39A-207ENST00000411642 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-207ENST00000411642 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-207ENST00000411642 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.25
TTC39A-207ENST00000411642 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
TTC39A-207ENST00000411642 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
TTC39A-207ENST00000411642 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
TTC39A-207ENST00000411642 ZCRB1Q8TBF4 217 aaKnown RBP13.52□□□□□ -0.25
TTC39A-207ENST00000411642 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.25
TTC39A-207ENST00000411642 KDRP35968 1356 aa13.52□□□□□ -0.25
TTC39A-207ENST00000411642 NHSQ6T4R5 1651 aa13.52□□□□□ -0.25
TTC39A-207ENST00000411642 DDX54Q8TDD1 881 aaKnown RBP13.51□□□□□ -0.25
TTC39A-207ENST00000411642 ITGB4P16144 1822 aa13.5□□□□□ -0.25
TTC39A-207ENST00000411642 PLEKHG2Q9H7P9 1386 aa13.5□□□□□ -0.25
TTC39A-207ENST00000411642 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
TTC39A-207ENST00000411642 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
TTC39A-207ENST00000411642 HMOX1P09601 288 aa13.5□□□□□ -0.25
TTC39A-207ENST00000411642 BCL9O00512 1426 aa13.49□□□□□ -0.25
TTC39A-207ENST00000411642 BTAF1O14981 1849 aa13.49□□□□□ -0.25
TTC39A-207ENST00000411642 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
TTC39A-207ENST00000411642 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
TTC39A-207ENST00000411642 TRIM37O94972 964 aa13.48□□□□□ -0.25
TTC39A-207ENST00000411642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
TTC39A-207ENST00000411642 SPG7Q9UQ90 795 aa13.48□□□□□ -0.25
TTC39A-207ENST00000411642 ANP32CO43423 234 aa13.47□□□□□ -0.25
TTC39A-207ENST00000411642 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
TTC39A-207ENST00000411642 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
TTC39A-207ENST00000411642 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
TTC39A-207ENST00000411642 SCN11AQ9UI33 1791 aa13.46□□□□□ -0.25
TTC39A-207ENST00000411642 CYP27B1O15528 508 aa13.46□□□□□ -0.25
TTC39A-207ENST00000411642 SF3B2Q13435 895 aaKnown RBP13.46□□□□□ -0.25
TTC39A-207ENST00000411642 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
TTC39A-207ENST00000411642 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-207ENST00000411642 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
TTC39A-207ENST00000411642 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
TTC39A-207ENST00000411642 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
TTC39A-207ENST00000411642 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
TTC39A-207ENST00000411642 PHKG2P15735 406 aa13.44□□□□□ -0.26
TTC39A-207ENST00000411642 ZNF530Q6P9A1 599 aaPredicted RBP13.44□□□□□ -0.26
TTC39A-207ENST00000411642 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
TTC39A-207ENST00000411642 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
TTC39A-207ENST00000411642 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
TTC39A-207ENST00000411642 KCNQ2O43526 872 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 FCHSD2O94868 740 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 BAG6P46379 1132 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 C1orf141Q5JVX7 400 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 DEFB132Q7Z7B7 95 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 BCL11BQ9C0K0 894 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-207ENST00000411642 RREB1Q92766 1687 aa13.42□□□□□ -0.26
TTC39A-207ENST00000411642 APBA3O96018 575 aa13.41□□□□□ -0.26
TTC39A-207ENST00000411642 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-207ENST00000411642 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
TTC39A-207ENST00000411642 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-207ENST00000411642 ADAMTS7Q9UKP4 1686 aa13.4□□□□□ -0.26
TTC39A-207ENST00000411642 LY75O60449 1722 aa13.4□□□□□ -0.26
TTC39A-207ENST00000411642 NUP188Q5SRE5 1749 aa13.4□□□□□ -0.26
TTC39A-207ENST00000411642 PRIM1P49642 420 aaKnown RBP13.4□□□□□ -0.26
TTC39A-207ENST00000411642 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
TTC39A-207ENST00000411642 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
TTC39A-207ENST00000411642 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
TTC39A-207ENST00000411642 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
TTC39A-207ENST00000411642 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
TTC39A-207ENST00000411642 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
TTC39A-207ENST00000411642 GAS2L2Q8NHY3 880 aa13.39□□□□□ -0.27
TTC39A-207ENST00000411642 PHACTR3Q96KR7 559 aa13.39□□□□□ -0.27
TTC39A-207ENST00000411642 SIPA1L3O60292 1781 aaPredicted RBP13.38□□□□□ -0.27
TTC39A-207ENST00000411642 NEFMP07197 916 aa13.38□□□□□ -0.27
TTC39A-207ENST00000411642 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
TTC39A-207ENST00000411642 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
TTC39A-207ENST00000411642 MPRIPQ6WCQ1 1025 aa13.37□□□□□ -0.27
TTC39A-207ENST00000411642 PNNQ9H307 717 aaKnown RBP13.37□□□□□ -0.27
TTC39A-207ENST00000411642 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
TTC39A-207ENST00000411642 MAPK8IP3Q9UPT6 1336 aa13.37□□□□□ -0.27
TTC39A-207ENST00000411642 PLSCR1O15162 318 aa13.36□□□□□ -0.27
TTC39A-207ENST00000411642 EZH2Q15910 746 aaKnown RBP13.36□□□□□ -0.27
TTC39A-207ENST00000411642 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
TTC39A-207ENST00000411642 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
TTC39A-207ENST00000411642 MRC1P22897 1456 aa13.36□□□□□ -0.27
TTC39A-207ENST00000411642 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
TTC39A-207ENST00000411642 DIEXFQ68CQ4 756 aaKnown RBP13.35□□□□□ -0.27
TTC39A-207ENST00000411642 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
TTC39A-207ENST00000411642 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
TTC39A-207ENST00000411642 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
TTC39A-207ENST00000411642 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
TTC39A-207ENST00000411642 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
TTC39A-207ENST00000411642 PIGBQ92521 554 aa13.34□□□□□ -0.27
TTC39A-207ENST00000411642 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
TTC39A-207ENST00000411642 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
TTC39A-207ENST00000411642 CABP4P57796 275 aa13.33□□□□□ -0.28
TTC39A-207ENST00000411642 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
TTC39A-207ENST00000411642 C5P01031 1676 aa13.33□□□□□ -0.28
TTC39A-207ENST00000411642 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
TTC39A-207ENST00000411642 TXNRD1Q16881 649 aa13.32□□□□□ -0.28
TTC39A-207ENST00000411642 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
TTC39A-207ENST00000411642 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
TTC39A-207ENST00000411642 NFATC2IPQ8NCF5 419 aa13.31□□□□□ -0.28
TTC39A-207ENST00000411642 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms