RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 GNAT3A8MTJ3 354 aa21.65■■□□□ 1.06
HCG11-201ENST00000411553 CCDC181Q5TID7 509 aa21.65■■□□□ 1.06
HCG11-201ENST00000411553 CBFA2T2O43439 604 aa21.65■■□□□ 1.06
HCG11-201ENST00000411553 ZC3H6P61129 1189 aaKnown RBP21.65■■□□□ 1.06
HCG11-201ENST00000411553 AXDND1Q5T1B0 1012 aaPredicted RBP21.65■■□□□ 1.06
HCG11-201ENST00000411553 MTERF4Q7Z6M4 381 aaKnown RBP21.65■■□□□ 1.06
HCG11-201ENST00000411553 WASF1Q92558 559 aa21.65■■□□□ 1.06
HCG11-201ENST00000411553 TMOD2Q9NZR1 351 aa21.64■■□□□ 1.06
HCG11-201ENST00000411553 IDH1O75874 414 aaKnown RBP21.64■■□□□ 1.05
HCG11-201ENST00000411553 KCNH5Q8NCM2 988 aa21.64■■□□□ 1.05
HCG11-201ENST00000411553 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
HCG11-201ENST00000411553 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
HCG11-201ENST00000411553 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
HCG11-201ENST00000411553 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.05
HCG11-201ENST00000411553 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
HCG11-201ENST00000411553 SPATA32Q96LK8 384 aa21.63■■□□□ 1.05
HCG11-201ENST00000411553 RPAP2Q8IXW5 612 aaPredicted RBP21.63■■□□□ 1.05
HCG11-201ENST00000411553 SPINK5Q9NQ38 1064 aaPredicted RBP21.63■■□□□ 1.05
HCG11-201ENST00000411553 CFAP45Q9UL16 551 aa21.63■■□□□ 1.05
HCG11-201ENST00000411553 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
HCG11-201ENST00000411553 ZRSR2Q15696 482 aaKnown RBP21.63■■□□□ 1.05
HCG11-201ENST00000411553 CCDC85AQ96PX6 553 aaPredicted RBP21.62■■□□□ 1.05
HCG11-201ENST00000411553 NFE2L2Q16236 605 aa21.62■■□□□ 1.05
HCG11-201ENST00000411553 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
HCG11-201ENST00000411553 IMMTQ16891 758 aaKnown RBP21.62■■□□□ 1.05
HCG11-201ENST00000411553 GOLGA6L10A6NI86 522 aa21.62■■□□□ 1.05
HCG11-201ENST00000411553 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
HCG11-201ENST00000411553 HMGN5P82970 282 aaKnown RBP21.61■■□□□ 1.05
HCG11-201ENST00000411553 ANKRD18AQ8IVF6 992 aa21.61■■□□□ 1.05
HCG11-201ENST00000411553 NUDT16Q96DE0 195 aaKnown RBP21.61■■□□□ 1.05
HCG11-201ENST00000411553 ZNF652Q9Y2D9 606 aa21.61■■□□□ 1.05
HCG11-201ENST00000411553 NBPF8Q3BBV2 869 aa21.6■■□□□ 1.05
HCG11-201ENST00000411553 SEPT7Q16181 437 aaKnown RBP21.6■■□□□ 1.05
HCG11-201ENST00000411553 METTL24Q5JXM2 366 aa21.6■■□□□ 1.05
HCG11-201ENST00000411553 SEPT11Q9NVA2 429 aaKnown RBP21.6■■□□□ 1.05
HCG11-201ENST00000411553 MATR3P43243 847 aaKnown RBP eCLIP21.6■■□□□ 1.05
HCG11-201ENST00000411553 USP5P45974 858 aa21.6■■□□□ 1.05
HCG11-201ENST00000411553 ABCF2Q9UG63 623 aa21.6■■□□□ 1.05
HCG11-201ENST00000411553 CEP57L1Q8IYX8 460 aa21.6■■□□□ 1.05
HCG11-201ENST00000411553 TROQ12816 1431 aaPredicted RBP21.59■■□□□ 1.05
HCG11-201ENST00000411553 ZNF287Q9HBT7 754 aa21.59■■□□□ 1.05
HCG11-201ENST00000411553 AKAP2Q9Y2D5 859 aa21.59■■□□□ 1.05
HCG11-201ENST00000411553 PIBF1Q8WXW3 757 aa21.59■■□□□ 1.05
HCG11-201ENST00000411553 CCDC61Q9Y6R9 512 aa21.59■■□□□ 1.05
HCG11-201ENST00000411553 DESP17661 470 aa21.58■■□□□ 1.05
HCG11-201ENST00000411553 TSPYL1Q9H0U9 437 aa21.58■■□□□ 1.05
HCG11-201ENST00000411553 TMOD3Q9NYL9 352 aa21.58■■□□□ 1.04
HCG11-201ENST00000411553 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 ANKRD62A6NC57 917 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 NUTM1Q86Y26 1132 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 CEP131Q9UPN4 1083 aa21.57■■□□□ 1.04
HCG11-201ENST00000411553 ZPR1O75312 459 aa21.56■■□□□ 1.04
HCG11-201ENST00000411553 PDIA4P13667 645 aaKnown RBP21.56■■□□□ 1.04
HCG11-201ENST00000411553 CAVIN4Q5BKX8 364 aa21.56■■□□□ 1.04
HCG11-201ENST00000411553 LEKR1Q6ZMV7 388 aa21.56■■□□□ 1.04
HCG11-201ENST00000411553 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
HCG11-201ENST00000411553 TMPOP42166 694 aaKnown RBP21.55■■□□□ 1.04
HCG11-201ENST00000411553 NUP62CLQ9H1M0 184 aa21.55■■□□□ 1.04
HCG11-201ENST00000411553 NSD3Q9BZ95 1437 aa21.55■■□□□ 1.04
HCG11-201ENST00000411553 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
HCG11-201ENST00000411553 IFIT1P09914 478 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
HCG11-201ENST00000411553 PTCD1O75127 700 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 LARP1Q6PKG0 1096 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
HCG11-201ENST00000411553 UPF3BQ9BZI7 483 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 POLR3DP05423 398 aaPredicted RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 CASTP20810 708 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 SEC63Q9UGP8 760 aaKnown RBP21.54■■□□□ 1.04
HCG11-201ENST00000411553 SMTNL1A8MU46 457 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 FAM177A1Q8N128 213 aaPredicted RBP21.53■■□□□ 1.04
HCG11-201ENST00000411553 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
HCG11-201ENST00000411553 U3KPZ7 1027 aaPredicted RBP21.53■■□□□ 1.04
HCG11-201ENST00000411553 TNIP1Q15025 636 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 ERLIN1O75477 346 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 CCDC112Q8NEF3 446 aa21.53■■□□□ 1.04
HCG11-201ENST00000411553 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
HCG11-201ENST00000411553 NEBLO76041 1014 aa21.52■■□□□ 1.04
HCG11-201ENST00000411553 EXOC6BQ9Y2D4 811 aa21.52■■□□□ 1.04
HCG11-201ENST00000411553 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
HCG11-201ENST00000411553 IQCEQ6IPM2 695 aa21.52■■□□□ 1.04
HCG11-201ENST00000411553 TMEM57Q8N5G2 664 aa21.52■■□□□ 1.04
HCG11-201ENST00000411553 CALRP27797 417 aaKnown RBP21.51■■□□□ 1.03
HCG11-201ENST00000411553 DDX11Q96FC9 970 aa21.51■■□□□ 1.03
HCG11-201ENST00000411553 TRIM21P19474 475 aaKnown RBP21.51■■□□□ 1.03
HCG11-201ENST00000411553 ENOX2Q16206 610 aaKnown RBP21.51■■□□□ 1.03
HCG11-201ENST00000411553 GLRX3O76003 335 aaKnown RBP21.51■■□□□ 1.03
HCG11-201ENST00000411553 MCM10Q7L590 875 aa21.51■■□□□ 1.03
HCG11-201ENST00000411553 BACH2Q9BYV9 841 aa21.51■■□□□ 1.03
HCG11-201ENST00000411553 MKNK2Q9HBH9 465 aa21.51■■□□□ 1.03
HCG11-201ENST00000411553 MYD88Q99836 296 aa21.5■■□□□ 1.03
HCG11-201ENST00000411553 CIZ1Q9ULV3 898 aaPredicted RBP21.5■■□□□ 1.03
HCG11-201ENST00000411553 DAPK1P53355 1430 aa21.5■■□□□ 1.03
HCG11-201ENST00000411553 PPP1R12BO60237 982 aaPredicted RBP21.5■■□□□ 1.03
HCG11-201ENST00000411553 CCDC66A2RUB6 948 aa21.49■■□□□ 1.03
HCG11-201ENST00000411553 MINDY4BA8MYZ0 360 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms