RNA–Protein interactions for RNA: ENST00000411525.1

LINC00539-201, long intergenic non-protein coding RNA 539, humanhuman

TSL 3

Gene LINC00539, Length 664 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-201ENST00000411525 ABCC6O95255 1503 aa14.98□□□□□ -0.01
LINC00539-201ENST00000411525 CSB-PGBD3P0DP91 1061 aa14.98□□□□□ -0.01
LINC00539-201ENST00000411525 CARD10Q9BWT7 1032 aa14.98□□□□□ -0.01
LINC00539-201ENST00000411525 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
LINC00539-201ENST00000411525 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
LINC00539-201ENST00000411525 BCL9O00512 1426 aa14.98□□□□□ -0.01
LINC00539-201ENST00000411525 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
LINC00539-201ENST00000411525 PPP1R1BQ9UD71 204 aaPredicted RBP14.97□□□□□ -0.01
LINC00539-201ENST00000411525 KAT6BQ8WYB5 2073 aa14.97□□□□□ -0.01
LINC00539-201ENST00000411525 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
LINC00539-201ENST00000411525 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
LINC00539-201ENST00000411525 EXOC5O00471 708 aa14.96□□□□□ -0.01
LINC00539-201ENST00000411525 SOX12O15370 315 aa14.96□□□□□ -0.01
LINC00539-201ENST00000411525 KCNQ2O43526 872 aa14.96□□□□□ -0.01
LINC00539-201ENST00000411525 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
LINC00539-201ENST00000411525 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
LINC00539-201ENST00000411525 FLT4P35916 1363 aa14.96□□□□□ -0.02
LINC00539-201ENST00000411525 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
LINC00539-201ENST00000411525 RTL1A6NKG5 1358 aa14.95□□□□□ -0.02
LINC00539-201ENST00000411525 MARCH10Q8NA82 808 aaPredicted RBP14.94□□□□□ -0.02
LINC00539-201ENST00000411525 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
LINC00539-201ENST00000411525 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
LINC00539-201ENST00000411525 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00539-201ENST00000411525 CCDC146Q8IYE0 955 aa14.92□□□□□ -0.02
LINC00539-201ENST00000411525 IL13P35225 146 aa14.91□□□□□ -0.02
LINC00539-201ENST00000411525 AMPHP49418 695 aa14.91□□□□□ -0.02
LINC00539-201ENST00000411525 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
LINC00539-201ENST00000411525 CASZ1Q86V15 1759 aa14.9□□□□□ -0.02
LINC00539-201ENST00000411525 EIF4A2Q14240 407 aaKnown RBP14.89□□□□□ -0.03
LINC00539-201ENST00000411525 HSP90AB2PQ58FF8 381 aa14.89□□□□□ -0.03
LINC00539-201ENST00000411525 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
LINC00539-201ENST00000411525 TNS2Q63HR2 1409 aa14.89□□□□□ -0.03
LINC00539-201ENST00000411525 ERBB3P21860 1342 aa14.89□□□□□ -0.03
LINC00539-201ENST00000411525 SENP3-EIF4A1A0A087X0R7 540 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 HOXC9P31274 260 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 TXNRD1Q16881 649 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 PROM2Q8N271 834 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 ANO8Q9HCE9 1232 aaPredicted RBP14.88□□□□□ -0.03
LINC00539-201ENST00000411525 NLRP2Q9NX02 1062 aa14.88□□□□□ -0.03
LINC00539-201ENST00000411525 NHSQ6T4R5 1651 aa14.87□□□□□ -0.03
LINC00539-201ENST00000411525 IL2RBP14784 551 aa14.87□□□□□ -0.03
LINC00539-201ENST00000411525 YY1P25490 414 aa14.87□□□□□ -0.03
LINC00539-201ENST00000411525 PNNQ9H307 717 aaKnown RBP14.87□□□□□ -0.03
LINC00539-201ENST00000411525 APAF1O14727 1248 aa14.86□□□□□ -0.03
LINC00539-201ENST00000411525 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
LINC00539-201ENST00000411525 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
LINC00539-201ENST00000411525 FAM208AQ9UK61 1670 aaKnown RBP14.85□□□□□ -0.03
LINC00539-201ENST00000411525 FCHSD2O94868 740 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 SLC15A2Q16348 729 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 ANKRD24Q8TF21 1146 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 IP6K1Q92551 441 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 SALL2Q9Y467 1007 aaPredicted RBP14.85□□□□□ -0.03
LINC00539-201ENST00000411525 MAPK8IP3Q9UPT6 1336 aa14.85□□□□□ -0.03
LINC00539-201ENST00000411525 BTAF1O14981 1849 aa14.83□□□□□ -0.04
LINC00539-201ENST00000411525 HMOX1P09601 288 aa14.83□□□□□ -0.04
LINC00539-201ENST00000411525 PRKAR2BP31323 418 aa14.83□□□□□ -0.04
LINC00539-201ENST00000411525 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
LINC00539-201ENST00000411525 ZBTB7AO95365 584 aa14.82□□□□□ -0.04
LINC00539-201ENST00000411525 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
LINC00539-201ENST00000411525 IGSF1Q8N6C5 1336 aa14.82□□□□□ -0.04
LINC00539-201ENST00000411525 KDRP35968 1356 aa14.82□□□□□ -0.04
LINC00539-201ENST00000411525 NEFMP07197 916 aa14.81□□□□□ -0.04
LINC00539-201ENST00000411525 ACSBG1Q96GR2 724 aa14.81□□□□□ -0.04
LINC00539-201ENST00000411525 PDGFDQ9GZP0 370 aaPredicted RBP14.81□□□□□ -0.04
LINC00539-201ENST00000411525 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
LINC00539-201ENST00000411525 RGPD2P0DJD1 1756 aa14.8□□□□□ -0.04
LINC00539-201ENST00000411525 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
LINC00539-201ENST00000411525 ATF5Q9Y2D1 282 aaPredicted RBP14.8□□□□□ -0.04
LINC00539-201ENST00000411525 CHD4Q14839 1912 aa14.8□□□□□ -0.04
LINC00539-201ENST00000411525 PTGER2P43116 358 aa14.79□□□□□ -0.04
LINC00539-201ENST00000411525 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
LINC00539-201ENST00000411525 AEBP1Q8IUX7 1158 aa14.79□□□□□ -0.04
LINC00539-201ENST00000411525 LTV1Q96GA3 475 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-201ENST00000411525 EYA1Q99502 592 aa14.79□□□□□ -0.04
LINC00539-201ENST00000411525 RRP7AQ9Y3A4 280 aaKnown RBP14.79□□□□□ -0.04
LINC00539-201ENST00000411525 NCAPD2Q15021 1401 aa14.78□□□□□ -0.04
LINC00539-201ENST00000411525 TMPOP42166 694 aaKnown RBP14.78□□□□□ -0.04
LINC00539-201ENST00000411525 DLG5Q8TDM6 1919 aa14.77□□□□□ -0.04
LINC00539-201ENST00000411525 NEUROD2Q15784 382 aa14.77□□□□□ -0.05
LINC00539-201ENST00000411525 QSER1Q2KHR3 1735 aa14.77□□□□□ -0.05
LINC00539-201ENST00000411525 PAPPAQ13219 1627 aa14.77□□□□□ -0.05
LINC00539-201ENST00000411525 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
LINC00539-201ENST00000411525 NFE2L2Q16236 605 aa14.76□□□□□ -0.05
LINC00539-201ENST00000411525 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
LINC00539-201ENST00000411525 WWC1Q8IX03 1113 aa14.76□□□□□ -0.05
LINC00539-201ENST00000411525 SYT17Q9BSW7 474 aa14.76□□□□□ -0.05
LINC00539-201ENST00000411525 DDX54Q8TDD1 881 aaKnown RBP14.75□□□□□ -0.05
LINC00539-201ENST00000411525 SLC16A10Q8TF71 515 aa14.75□□□□□ -0.05
LINC00539-201ENST00000411525 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
LINC00539-201ENST00000411525 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
LINC00539-201ENST00000411525 ARXQ96QS3 562 aa14.75□□□□□ -0.05
LINC00539-201ENST00000411525 FHDC1Q9C0D6 1143 aaPredicted RBP14.75□□□□□ -0.05
LINC00539-201ENST00000411525 RIPK4P57078 832 aa14.74□□□□□ -0.05
LINC00539-201ENST00000411525 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
LINC00539-201ENST00000411525 WDR63Q8IWG1 891 aa14.73□□□□□ -0.05
LINC00539-201ENST00000411525 TRIM35Q9UPQ4 493 aa14.73□□□□□ -0.05
LINC00539-201ENST00000411525 E9PSI1 815 aa14.72□□□□□ -0.05
LINC00539-201ENST00000411525 HMGB2P26583 209 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms