RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 PARP4Q9UKK3 1724 aaKnown RBP13.33□□□□□ -0.28
RN7SKP54-201ENST00000410704 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
RN7SKP54-201ENST00000410704 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
RN7SKP54-201ENST00000410704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
RN7SKP54-201ENST00000410704 MEGF6O75095 1541 aa13.32□□□□□ -0.28
RN7SKP54-201ENST00000410704 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 A0A0G2JS52 829 aa13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 APAF1O14727 1248 aa13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 MYT1Q01538 1121 aa13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 ZCRB1Q8TBF4 217 aaKnown RBP13.31□□□□□ -0.28
RN7SKP54-201ENST00000410704 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 ZNF530Q6P9A1 599 aaPredicted RBP13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
RN7SKP54-201ENST00000410704 EXOC5O00471 708 aa13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 MTHFSDQ2M296 383 aaKnown RBP13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
RN7SKP54-201ENST00000410704 GLI3P10071 1580 aa13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 RIPK4P57078 832 aa13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 DDB1Q16531 1140 aa13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
RN7SKP54-201ENST00000410704 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 RXRBP28702 533 aa13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 IFNL2Q8IZJ0 200 aa13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 RTF1Q92541 710 aaKnown RBP13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.29
RN7SKP54-201ENST00000410704 SENP3-EIF4A1A0A087X0R7 540 aa13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 TNS2Q63HR2 1409 aa13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 DDX54Q8TDD1 881 aaKnown RBP13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 RGS17Q9UGC6 210 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP54-201ENST00000410704 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
RN7SKP54-201ENST00000410704 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
RN7SKP54-201ENST00000410704 PHKG2P15735 406 aa13.25□□□□□ -0.29
RN7SKP54-201ENST00000410704 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
RN7SKP54-201ENST00000410704 SEPT12Q8IYM1 358 aa13.25□□□□□ -0.29
RN7SKP54-201ENST00000410704 THSD7AQ9UPZ6 1657 aa13.24□□□□□ -0.29
RN7SKP54-201ENST00000410704 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
RN7SKP54-201ENST00000410704 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
RN7SKP54-201ENST00000410704 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
RN7SKP54-201ENST00000410704 CYP27B1O15528 508 aa13.23□□□□□ -0.29
RN7SKP54-201ENST00000410704 CALD1Q05682 793 aaKnown RBP13.23□□□□□ -0.29
RN7SKP54-201ENST00000410704 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
RN7SKP54-201ENST00000410704 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
RN7SKP54-201ENST00000410704 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
RN7SKP54-201ENST00000410704 ZBED9Q6R2W3 1325 aa13.21□□□□□ -0.29
RN7SKP54-201ENST00000410704 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP54-201ENST00000410704 MPRIPQ6WCQ1 1025 aa13.21□□□□□ -0.29
RN7SKP54-201ENST00000410704 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 DLG5Q8TDM6 1919 aa13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 MCM10Q7L590 875 aa13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 WDR63Q8IWG1 891 aa13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
RN7SKP54-201ENST00000410704 TEFQ10587 303 aa13.19□□□□□ -0.3
RN7SKP54-201ENST00000410704 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
RN7SKP54-201ENST00000410704 ERVV-2B6SEH9 535 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 CABP4P57796 275 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 CEMIPQ8WUJ3 1361 aa13.18□□□□□ -0.3
RN7SKP54-201ENST00000410704 IL16Q14005 1332 aa13.17□□□□□ -0.3
RN7SKP54-201ENST00000410704 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
RN7SKP54-201ENST00000410704 RGS12O14924 1447 aa13.17□□□□□ -0.3
RN7SKP54-201ENST00000410704 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
RN7SKP54-201ENST00000410704 GNAI1P63096 354 aa13.16□□□□□ -0.3
RN7SKP54-201ENST00000410704 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
RN7SKP54-201ENST00000410704 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 E9PSI1 815 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
RN7SKP54-201ENST00000410704 NFATC2IPQ8NCF5 419 aa13.14□□□□□ -0.31
RN7SKP54-201ENST00000410704 SYTL4Q96C24 671 aaPredicted RBP13.14□□□□□ -0.31
RN7SKP54-201ENST00000410704 CFAP44Q96MT7 982 aa13.14□□□□□ -0.31
RN7SKP54-201ENST00000410704 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
RN7SKP54-201ENST00000410704 BCL9O00512 1426 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
RN7SKP54-201ENST00000410704 MRC1P22897 1456 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms