RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 U2AF1L5P0DN76 240 aaPredicted RBP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 PLCG2P16885 1265 aa9.76□□□□□ -0.85
CXCR4-202ENST00000409817 U2AF1Q01081 240 aaKnown RBP eCLIP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 ZNF142P52746 1687 aaPredicted RBP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
CXCR4-202ENST00000409817 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
CXCR4-202ENST00000409817 ADAMTSL3P82987 1691 aa9.75□□□□□ -0.85
CXCR4-202ENST00000409817 GABBR2O75899 941 aa9.75□□□□□ -0.85
CXCR4-202ENST00000409817 RIMS1Q86UR5 1692 aaKnown RBP9.75□□□□□ -0.85
CXCR4-202ENST00000409817 CDK12Q9NYV4 1490 aaPredicted RBP9.75□□□□□ -0.85
CXCR4-202ENST00000409817 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
CXCR4-202ENST00000409817 SETD1BQ9UPS6 1966 aaKnown RBP9.75□□□□□ -0.85
CXCR4-202ENST00000409817 OXER1Q8TDS5 423 aa9.74□□□□□ -0.85
CXCR4-202ENST00000409817 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
CXCR4-202ENST00000409817 POTEFA5A3E0 1075 aa9.74□□□□□ -0.85
CXCR4-202ENST00000409817 COG3Q96JB2 828 aa9.74□□□□□ -0.85
CXCR4-202ENST00000409817 SLC26A8Q96RN1 970 aa9.74□□□□□ -0.85
CXCR4-202ENST00000409817 TRIM66O15016 1216 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 FCHSD2O94868 740 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
CXCR4-202ENST00000409817 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
CXCR4-202ENST00000409817 PLEKHF1Q96S99 279 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 MAPK8IP3Q9UPT6 1336 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 NRKQ7Z2Y5 1582 aa9.73□□□□□ -0.85
CXCR4-202ENST00000409817 CT47B1P0C2W7 299 aaPredicted RBP9.72□□□□□ -0.85
CXCR4-202ENST00000409817 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 KRI1Q8N9T8 703 aaKnown RBP9.72□□□□□ -0.85
CXCR4-202ENST00000409817 EXOC6Q8TAG9 804 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
CXCR4-202ENST00000409817 NEFMP07197 916 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 OSBPP22059 807 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 ANKLE2Q86XL3 938 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 L3MBTL3Q96JM7 780 aaPredicted RBP9.72□□□□□ -0.85
CXCR4-202ENST00000409817 IL16Q14005 1332 aa9.72□□□□□ -0.85
CXCR4-202ENST00000409817 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
CXCR4-202ENST00000409817 G3V3G9 751 aa9.71□□□□□ -0.85
CXCR4-202ENST00000409817 USP6P35125 1406 aa9.71□□□□□ -0.85
CXCR4-202ENST00000409817 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.85
CXCR4-202ENST00000409817 TTC21BQ7Z4L5 1316 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 ERICH6Q7L0X2 663 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 ACEP12821 1306 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 TMPOP42166 694 aaKnown RBP9.7□□□□□ -0.86
CXCR4-202ENST00000409817 PTGER2P43116 358 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
CXCR4-202ENST00000409817 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 NME9Q86XW9 330 aa9.7□□□□□ -0.86
CXCR4-202ENST00000409817 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 PDE4DQ08499 809 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 AAMPQ13685 434 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 KDM4CQ9H3R0 1056 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
CXCR4-202ENST00000409817 NALCNQ8IZF0 1738 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 USP31Q70CQ4 1352 aa9.69□□□□□ -0.86
CXCR4-202ENST00000409817 PLIN1O60240 522 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 CRBNQ96SW2 442 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 RRP7AQ9Y3A4 280 aaKnown RBP9.68□□□□□ -0.86
CXCR4-202ENST00000409817 CHD2O14647 1828 aaKnown RBP9.68□□□□□ -0.86
CXCR4-202ENST00000409817 IL13P35225 146 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 CALD1Q05682 793 aaKnown RBP9.68□□□□□ -0.86
CXCR4-202ENST00000409817 C14orf37Q86TY3 774 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 SP7Q8TDD2 431 aaPredicted RBP9.68□□□□□ -0.86
CXCR4-202ENST00000409817 RSPH6AQ9H0K4 717 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
CXCR4-202ENST00000409817 DDX12PQ92771 950 aa9.67□□□□□ -0.86
CXCR4-202ENST00000409817 FMN2Q9NZ56 1722 aa9.67□□□□□ -0.86
CXCR4-202ENST00000409817 KCNA6P17658 529 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 PPM1GO15355 546 aaPredicted RBP9.66□□□□□ -0.86
CXCR4-202ENST00000409817 SEC24BO95487 1268 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 MS4A1P11836 297 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 RARSP54136 660 aaKnown RBP9.66□□□□□ -0.86
CXCR4-202ENST00000409817 RIPK4P57078 832 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 LMOD3Q0VAK6 560 aa9.66□□□□□ -0.86
CXCR4-202ENST00000409817 TCERG1O14776 1098 aaKnown RBP9.65□□□□□ -0.86
CXCR4-202ENST00000409817 FECHP22830 423 aa9.65□□□□□ -0.86
CXCR4-202ENST00000409817 PRKAR2BP31323 418 aa9.65□□□□□ -0.86
CXCR4-202ENST00000409817 CENPQQ7L2Z9 268 aaPredicted RBP9.65□□□□□ -0.86
CXCR4-202ENST00000409817 NGDNQ8NEJ9 315 aaKnown RBP9.65□□□□□ -0.86
CXCR4-202ENST00000409817 ZNF428Q96B54 188 aa9.65□□□□□ -0.86
CXCR4-202ENST00000409817 KIF24Q5T7B8 1368 aa9.65□□□□□ -0.87
CXCR4-202ENST00000409817 NPHP4O75161 1426 aaPredicted RBP9.64□□□□□ -0.87
CXCR4-202ENST00000409817 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 BCAR3O75815 825 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 NFE2L2Q16236 605 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 C20orf194Q5TEA3 1177 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 IL27Q8NEV9 243 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 FANCIQ9NVI1 1328 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 CANXP27824 592 aaKnown RBP9.64□□□□□ -0.87
CXCR4-202ENST00000409817 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
CXCR4-202ENST00000409817 ADGRL3Q9HAR2 1447 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms