RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 AMPHP49418 695 aa18.29■□□□□ 0.52
LIMS2-206ENST00000409754 B4GALNT3Q6L9W6 998 aa18.29■□□□□ 0.52
LIMS2-206ENST00000409754 WNK3Q9BYP7 1800 aa18.28■□□□□ 0.52
LIMS2-206ENST00000409754 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
LIMS2-206ENST00000409754 RTL1A6NKG5 1358 aa18.27■□□□□ 0.52
LIMS2-206ENST00000409754 CT47B1P0C2W7 299 aaPredicted RBP18.27■□□□□ 0.51
LIMS2-206ENST00000409754 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.51
LIMS2-206ENST00000409754 SULT6B1Q6IMI4 303 aa18.27■□□□□ 0.51
LIMS2-206ENST00000409754 EP400Q96L91 3159 aa18.26■□□□□ 0.51
LIMS2-206ENST00000409754 HOXC9P31274 260 aa18.26■□□□□ 0.51
LIMS2-206ENST00000409754 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
LIMS2-206ENST00000409754 FAM208AQ9UK61 1670 aaKnown RBP18.26■□□□□ 0.51
LIMS2-206ENST00000409754 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
LIMS2-206ENST00000409754 THSD7AQ9UPZ6 1657 aa18.25■□□□□ 0.51
LIMS2-206ENST00000409754 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
LIMS2-206ENST00000409754 LARP1Q6PKG0 1096 aaKnown RBP18.25■□□□□ 0.51
LIMS2-206ENST00000409754 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
LIMS2-206ENST00000409754 QTRT2Q9H974 415 aaKnown RBP18.25■□□□□ 0.51
LIMS2-206ENST00000409754 VPS72Q15906 364 aa18.24■□□□□ 0.51
LIMS2-206ENST00000409754 ILDR2Q71H61 639 aa18.24■□□□□ 0.51
LIMS2-206ENST00000409754 AEBP1Q8IUX7 1158 aa18.24■□□□□ 0.51
LIMS2-206ENST00000409754 ERBB3P21860 1342 aa18.24■□□□□ 0.51
LIMS2-206ENST00000409754 RGS12O14924 1447 aa18.24■□□□□ 0.51
LIMS2-206ENST00000409754 BCAR3O75815 825 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 IP6K1Q92551 441 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 STRN4Q9NRL3 753 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 TRPC5Q9UL62 973 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-206ENST00000409754 KDRP35968 1356 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
LIMS2-206ENST00000409754 CRBNQ96SW2 442 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
LIMS2-206ENST00000409754 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
LIMS2-206ENST00000409754 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
LIMS2-206ENST00000409754 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
LIMS2-206ENST00000409754 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
LIMS2-206ENST00000409754 SPATA31A1Q5TZJ5 1347 aa18.21■□□□□ 0.51
LIMS2-206ENST00000409754 WDR17Q8IZU2 1322 aa18.21■□□□□ 0.51
LIMS2-206ENST00000409754 CRB1P82279 1406 aa18.21■□□□□ 0.51
LIMS2-206ENST00000409754 EYA1Q99502 592 aa18.2■□□□□ 0.5
LIMS2-206ENST00000409754 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
LIMS2-206ENST00000409754 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
LIMS2-206ENST00000409754 ANKRD24Q8TF21 1146 aa18.19■□□□□ 0.5
LIMS2-206ENST00000409754 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
LIMS2-206ENST00000409754 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
LIMS2-206ENST00000409754 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
LIMS2-206ENST00000409754 LRRC37A3O60309 1634 aa18.18■□□□□ 0.5
LIMS2-206ENST00000409754 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
LIMS2-206ENST00000409754 NCAPD2Q15021 1401 aa18.18■□□□□ 0.5
LIMS2-206ENST00000409754 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
LIMS2-206ENST00000409754 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
LIMS2-206ENST00000409754 GNAI1P63096 354 aa18.17■□□□□ 0.5
LIMS2-206ENST00000409754 RXRBP28702 533 aa18.16■□□□□ 0.5
LIMS2-206ENST00000409754 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-206ENST00000409754 THUMPD2Q9BTF0 503 aaKnown RBP18.16■□□□□ 0.5
LIMS2-206ENST00000409754 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
LIMS2-206ENST00000409754 CFAP44Q96MT7 982 aa18.15■□□□□ 0.5
LIMS2-206ENST00000409754 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
LIMS2-206ENST00000409754 CANXP27824 592 aaKnown RBP18.14■□□□□ 0.49
LIMS2-206ENST00000409754 EVA1CP58658 441 aa18.14■□□□□ 0.49
LIMS2-206ENST00000409754 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
LIMS2-206ENST00000409754 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
LIMS2-206ENST00000409754 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
LIMS2-206ENST00000409754 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 ZNF428Q96B54 188 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 MEGF6O75095 1541 aa18.13■□□□□ 0.49
LIMS2-206ENST00000409754 TOM1L2Q6ZVM7 507 aa18.12■□□□□ 0.49
LIMS2-206ENST00000409754 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
LIMS2-206ENST00000409754 MTHFSDQ2M296 383 aaKnown RBP18.12■□□□□ 0.49
LIMS2-206ENST00000409754 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
LIMS2-206ENST00000409754 CSB-PGBD3P0DP91 1061 aa18.11■□□□□ 0.49
LIMS2-206ENST00000409754 ALDH1L2Q3SY69 923 aa18.11■□□□□ 0.49
LIMS2-206ENST00000409754 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
LIMS2-206ENST00000409754 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
LIMS2-206ENST00000409754 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
LIMS2-206ENST00000409754 MBIPQ9NS73 344 aa18.11■□□□□ 0.49
LIMS2-206ENST00000409754 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
LIMS2-206ENST00000409754 BCL2L13Q9BXK5 485 aa18.1■□□□□ 0.49
LIMS2-206ENST00000409754 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
LIMS2-206ENST00000409754 HTATSF1O43719 755 aaKnown RBP18.09■□□□□ 0.49
LIMS2-206ENST00000409754 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
LIMS2-206ENST00000409754 SSH1Q8WYL5 1049 aa18.09■□□□□ 0.49
LIMS2-206ENST00000409754 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
LIMS2-206ENST00000409754 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
LIMS2-206ENST00000409754 MS4A1P11836 297 aa18.08■□□□□ 0.48
LIMS2-206ENST00000409754 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.48
LIMS2-206ENST00000409754 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 CHL1O00533 1208 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 VAMP4O75379 141 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 AAMPQ13685 434 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 MCM10Q7L590 875 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 PANK1Q8TE04 598 aa18.07■□□□□ 0.48
LIMS2-206ENST00000409754 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
LIMS2-206ENST00000409754 THRAP3Q9Y2W1 955 aaKnown RBP18.07■□□□□ 0.48
LIMS2-206ENST00000409754 KIF16BQ96L93 1317 aa18.06■□□□□ 0.48
LIMS2-206ENST00000409754 TNS2Q63HR2 1409 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms