RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 MX1P20591 662 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 HDGFL1Q5TGJ6 251 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZCCHC11Q5TAX3 1644 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 TET3O43151 1660 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 KIF1BO60333 1816 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 FIBPO43427 364 aa13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZKSCAN1P17029 563 aaPredicted RBP13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 CHD1O14646 1710 aa13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 PTPRCP08575 1304 aa13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
PCDHAC1-202ENST00000409700 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 IL13P35225 146 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 SHROOM2Q13796 1616 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
PCDHAC1-202ENST00000409700 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 HSP90B1P14625 803 aaKnown RBP13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 PDE1AP54750 535 aa13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
PCDHAC1-202ENST00000409700 GOLGA6L6A8MZA4 724 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 CLASRPQ8N2M8 674 aaKnown RBP13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 UHRF1BP1LA0JNW5 1464 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 TMX3Q96JJ7 454 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 LRRFIP2Q9Y608 721 aaKnown RBP13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
PCDHAC1-202ENST00000409700 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.31
PCDHAC1-202ENST00000409700 ABCA6Q8N139 1617 aa13.08□□□□□ -0.32
PCDHAC1-202ENST00000409700 FLIIQ13045 1269 aa13.08□□□□□ -0.32
PCDHAC1-202ENST00000409700 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
PCDHAC1-202ENST00000409700 PRIM1P49642 420 aaKnown RBP13.08□□□□□ -0.32
PCDHAC1-202ENST00000409700 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
PCDHAC1-202ENST00000409700 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
PCDHAC1-202ENST00000409700 ACEP12821 1306 aa13.07□□□□□ -0.32
PCDHAC1-202ENST00000409700 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
PCDHAC1-202ENST00000409700 FOXO3O43524 673 aa13.07□□□□□ -0.32
PCDHAC1-202ENST00000409700 AIMP1Q12904 312 aaKnown RBP13.07□□□□□ -0.32
PCDHAC1-202ENST00000409700 EFCAB6Q5THR3 1501 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 ABCC4O15439 1325 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 SIRT2Q8IXJ6 389 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 GNAT3A8MTJ3 354 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 UQCRHP07919 91 aa13.06□□□□□ -0.32
PCDHAC1-202ENST00000409700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 MSH6P52701 1360 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 H3BQV1 296 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 G2E3Q7L622 706 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
PCDHAC1-202ENST00000409700 PKP1Q13835 747 aa13.04□□□□□ -0.32
PCDHAC1-202ENST00000409700 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
PCDHAC1-202ENST00000409700 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
PCDHAC1-202ENST00000409700 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
PCDHAC1-202ENST00000409700 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 FAM184AQ8NB25 1140 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 CSB-PGBD3P0DP91 1061 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 CASTP20810 708 aaKnown RBP13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 JAKMIP1Q96N16 626 aaKnown RBP13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 RBSNQ9H1K0 784 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 PSME1Q06323 249 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 SPC24Q8NBT2 197 aa13.03□□□□□ -0.32
PCDHAC1-202ENST00000409700 CEP152O94986 1710 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 CHL1O00533 1208 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 FSD1Q9BTV5 496 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.32
PCDHAC1-202ENST00000409700 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms