RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 NUP98P52948 1817 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 PDE3BQ13370 1112 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 MYH3P11055 1940 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 GCP02774 474 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 MTHFSP49914 203 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
R3HDM1-203ENST00000409606 COG3Q96JB2 828 aa6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 ATF3P18847 181 aa6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 WDR63Q8IWG1 891 aa6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 AXIN2Q9Y2T1 843 aa6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 ADAMTS8Q9UP79 889 aa6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 BRCA1P38398 1863 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-203ENST00000409606 RBM33Q96EV2 1170 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 GGNBP2Q9H3C7 697 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 AFF2P51816 1311 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 MYH14Q7Z406 1995 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 BARGINQ6ZT62 677 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 EMILIN1Q9Y6C2 1016 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 MORC1Q86VD1 984 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 RUNDC1Q96C34 613 aa6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 THRAP3Q9Y2W1 955 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-203ENST00000409606 SF3B2Q13435 895 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-203ENST00000409606 ESCO1Q5FWF5 840 aa6.55□□□□□ -1.36
R3HDM1-203ENST00000409606 CT47B1P0C2W7 299 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 SAFB2Q14151 953 aaKnown RBP eCLIP6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 CARD10Q9BWT7 1032 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 SPATA31A5Q5VU36 1347 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 SPATA31A7Q8IWB4 1347 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 KCNA4P22459 653 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 EYA1Q99502 592 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 IFFO2Q5TF58 517 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 PMFBP1Q8TBY8 1022 aa6.54□□□□□ -1.36
R3HDM1-203ENST00000409606 MAP3K5Q99683 1374 aa6.53□□□□□ -1.36
R3HDM1-203ENST00000409606 DIAPH1O60610 1272 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-203ENST00000409606 CC2D1BQ5T0F9 858 aaKnown RBP6.53□□□□□ -1.36
R3HDM1-203ENST00000409606 COL15A1P39059 1388 aa6.53□□□□□ -1.36
R3HDM1-203ENST00000409606 SPATA31A1Q5TZJ5 1347 aa6.53□□□□□ -1.36
R3HDM1-203ENST00000409606 HSP90AB2PQ58FF8 381 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 WWC1Q8IX03 1113 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 QTRT2Q9H974 415 aaKnown RBP6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 ATP10DQ9P241 1426 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 LRP10Q7Z4F1 713 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 FAM83GA6ND36 823 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NUTM2BA6NNL0 878 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NUTM2EB1AL46 878 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NUTM2AQ8IVF1 878 aaPredicted RBP6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 PSME4Q14997 1843 aa6.52□□□□□ -1.37
R3HDM1-203ENST00000409606 FOXO3O43524 673 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 TMPOP42166 694 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 ANKRD31Q8N7Z5 1873 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 VPS72Q15906 364 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 NGDNQ8NEJ9 315 aaKnown RBP6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 PHACTR3Q96KR7 559 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 DOCK2Q92608 1830 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 CHL1O00533 1208 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 TMC1Q8TDI8 760 aa6.51□□□□□ -1.37
R3HDM1-203ENST00000409606 RGL2O15211 777 aa6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 PNNQ9H307 717 aaKnown RBP6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 BAG6P46379 1132 aa6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 MRS2Q9HD23 443 aa6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 SPINK5Q9NQ38 1064 aaPredicted RBP6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 IFT57Q9NWB7 429 aa6.5□□□□□ -1.37
R3HDM1-203ENST00000409606 RRS1Q15050 365 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 RIC1Q4ADV7 1423 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 NLRP6P59044 892 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 DDX17Q92841 729 aaKnown RBP6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 DUOX1Q9NRD9 1551 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 LAMB1P07942 1786 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 SPEF2Q9C093 1822 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 HOXB7P09629 217 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 CFAP53Q96M91 514 aa6.49□□□□□ -1.37
R3HDM1-203ENST00000409606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 AMOTQ4VCS5 1084 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 CDCA7Q9BWT1 371 aaPredicted RBP6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 FBLN1P23142 703 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 ERICH6BQ5W0A0 696 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 NUDCQ9Y266 331 aa6.48□□□□□ -1.37
R3HDM1-203ENST00000409606 COL11A2P13942 1736 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 TCP11L2Q8N4U5 519 aa6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 MTHFSDQ2M296 383 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 AEBP1Q8IUX7 1158 aa6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 RTN4Q9NQC3 1192 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 TNRC6CQ9HCJ0 1690 aaKnown RBP6.47□□□□□ -1.37
R3HDM1-203ENST00000409606 E9PSI1 815 aa6.46□□□□□ -1.37
R3HDM1-203ENST00000409606 USP21Q9UK80 565 aa6.46□□□□□ -1.37
R3HDM1-203ENST00000409606 ZBTB22O15209 634 aa6.46□□□□□ -1.38
R3HDM1-203ENST00000409606 PHKG2P15735 406 aa6.46□□□□□ -1.38
R3HDM1-203ENST00000409606 ALDH1L2Q3SY69 923 aa6.46□□□□□ -1.38
R3HDM1-203ENST00000409606 FANCIQ9NVI1 1328 aa6.46□□□□□ -1.38
R3HDM1-203ENST00000409606 IL17REQ8NFR9 667 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms