RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
CHRNA1-205ENST00000409542 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
CHRNA1-205ENST00000409542 PELP1Q8IZL8 1130 aaKnown RBP17.88■□□□□ 0.45
CHRNA1-205ENST00000409542 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
CHRNA1-205ENST00000409542 TFCP2L1Q9NZI6 479 aa17.88■□□□□ 0.45
CHRNA1-205ENST00000409542 FAM208AQ9UK61 1670 aaKnown RBP17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 HOXC9P31274 260 aa17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 TERF2IPQ9NYB0 399 aa17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 MAP3K19Q56UN5 1328 aa17.87■□□□□ 0.45
CHRNA1-205ENST00000409542 LY75O60449 1722 aa17.86■□□□□ 0.45
CHRNA1-205ENST00000409542 POLD1P28340 1107 aa17.86■□□□□ 0.45
CHRNA1-205ENST00000409542 ANKRD36BQ8N2N9 1353 aa17.86■□□□□ 0.45
CHRNA1-205ENST00000409542 MEGF6O75095 1541 aa17.84■□□□□ 0.45
CHRNA1-205ENST00000409542 ZNF316A6NFI3 1004 aaPredicted RBP17.84■□□□□ 0.45
CHRNA1-205ENST00000409542 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
CHRNA1-205ENST00000409542 YBX3P16989 372 aaKnown RBP eCLIP17.83■□□□□ 0.45
CHRNA1-205ENST00000409542 COL23A1Q86Y22 540 aaPredicted RBP17.83■□□□□ 0.45
CHRNA1-205ENST00000409542 PUS7Q96PZ0 661 aaKnown RBP17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 TESK2Q96S53 571 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 AMPHP49418 695 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 NBPF6Q5VWK0 638 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 DIEXFQ68CQ4 756 aaKnown RBP17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 USHBP1Q8N6Y0 703 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 COG3Q96JB2 828 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 NBPF4Q96M43 638 aa17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 CCNL1Q9UK58 526 aaPredicted RBP17.82■□□□□ 0.44
CHRNA1-205ENST00000409542 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
CHRNA1-205ENST00000409542 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
CHRNA1-205ENST00000409542 MSH5O43196 834 aa17.8■□□□□ 0.44
CHRNA1-205ENST00000409542 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
CHRNA1-205ENST00000409542 CEP350Q5VT06 3117 aa17.8■□□□□ 0.44
CHRNA1-205ENST00000409542 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
CHRNA1-205ENST00000409542 USP47Q96K76 1375 aa17.76■□□□□ 0.43
CHRNA1-205ENST00000409542 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
CHRNA1-205ENST00000409542 FYB1O15117 783 aa17.75■□□□□ 0.43
CHRNA1-205ENST00000409542 AMIGO3Q86WK7 504 aa17.75■□□□□ 0.43
CHRNA1-205ENST00000409542 GRIN3BO60391 1043 aa17.74■□□□□ 0.43
CHRNA1-205ENST00000409542 SMIM5Q71RC9 77 aa17.74■□□□□ 0.43
CHRNA1-205ENST00000409542 RTL1A6NKG5 1358 aa17.73■□□□□ 0.43
CHRNA1-205ENST00000409542 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
CHRNA1-205ENST00000409542 C5P01031 1676 aa17.73■□□□□ 0.43
CHRNA1-205ENST00000409542 TONSLQ96HA7 1378 aa17.72■□□□□ 0.43
CHRNA1-205ENST00000409542 TAF1LQ8IZX4 1826 aa17.72■□□□□ 0.43
CHRNA1-205ENST00000409542 RAPGEF4Q8WZA2 1011 aa17.71■□□□□ 0.43
CHRNA1-205ENST00000409542 ATP10DQ9P241 1426 aa17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 CYP27B1O15528 508 aa17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 MPRIPQ6WCQ1 1025 aa17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 CGNL1Q0VF96 1302 aa17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
CHRNA1-205ENST00000409542 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
CHRNA1-205ENST00000409542 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
CHRNA1-205ENST00000409542 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
CHRNA1-205ENST00000409542 ITGB4P16144 1822 aa17.68■□□□□ 0.42
CHRNA1-205ENST00000409542 PCDH11XQ9BZA7 1347 aa17.68■□□□□ 0.42
CHRNA1-205ENST00000409542 PCDH11YQ9BZA8 1340 aa17.68■□□□□ 0.42
CHRNA1-205ENST00000409542 INSRP06213 1382 aa17.67■□□□□ 0.42
CHRNA1-205ENST00000409542 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
CHRNA1-205ENST00000409542 IFFO2Q5TF58 517 aa17.67■□□□□ 0.42
CHRNA1-205ENST00000409542 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
CHRNA1-205ENST00000409542 PHF14O94880 888 aa17.65■□□□□ 0.42
CHRNA1-205ENST00000409542 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
CHRNA1-205ENST00000409542 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
CHRNA1-205ENST00000409542 PIGBQ92521 554 aa17.65■□□□□ 0.42
CHRNA1-205ENST00000409542 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
CHRNA1-205ENST00000409542 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
CHRNA1-205ENST00000409542 ADCY9O60503 1353 aa17.64■□□□□ 0.41
CHRNA1-205ENST00000409542 FLT4P35916 1363 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 KIF20BQ96Q89 1820 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 IGSF1Q8N6C5 1336 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 AK7Q96M32 723 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
CHRNA1-205ENST00000409542 MAP2P11137 1827 aaKnown RBP17.62■□□□□ 0.41
CHRNA1-205ENST00000409542 TMF1P82094 1093 aa17.62■□□□□ 0.41
CHRNA1-205ENST00000409542 PKD1L3Q7Z443 1732 aa17.61■□□□□ 0.41
CHRNA1-205ENST00000409542 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
CHRNA1-205ENST00000409542 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
CHRNA1-205ENST00000409542 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
CHRNA1-205ENST00000409542 ITPK1Q13572 414 aa17.59■□□□□ 0.41
CHRNA1-205ENST00000409542 NCAPD2Q15021 1401 aa17.59■□□□□ 0.41
CHRNA1-205ENST00000409542 KIF24Q5T7B8 1368 aa17.59■□□□□ 0.41
CHRNA1-205ENST00000409542 LOC102724428A0A0B4J2F2 783 aa17.58■□□□□ 0.41
CHRNA1-205ENST00000409542 SIK1P57059 783 aa17.58■□□□□ 0.41
CHRNA1-205ENST00000409542 ASAP1Q9ULH1 1129 aa17.58■□□□□ 0.41
CHRNA1-205ENST00000409542 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
CHRNA1-205ENST00000409542 HSPA6P17066 643 aa17.57■□□□□ 0.4
CHRNA1-205ENST00000409542 EYA1Q99502 592 aa17.57■□□□□ 0.4
CHRNA1-205ENST00000409542 SSFA2P28290 1259 aa17.56■□□□□ 0.4
CHRNA1-205ENST00000409542 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
CHRNA1-205ENST00000409542 KIF3CO14782 793 aa17.56■□□□□ 0.4
CHRNA1-205ENST00000409542 GNPATO15228 680 aa17.55■□□□□ 0.4
CHRNA1-205ENST00000409542 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
CHRNA1-205ENST00000409542 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
CHRNA1-205ENST00000409542 ATP6V1AP38606 617 aa17.54■□□□□ 0.4
CHRNA1-205ENST00000409542 ATG3Q9NT62 314 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms