RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ABCC5O15440 1437 aa29.74■■■□□ 2.35
SPIRE1-202ENST00000409402 CDKL5O76039 1030 aa29.73■■■□□ 2.35
SPIRE1-202ENST00000409402 IDH1O75874 414 aaKnown RBP29.73■■■□□ 2.35
SPIRE1-202ENST00000409402 PTPN23Q9H3S7 1636 aa29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 IL1RAPL2Q9NP60 686 aa29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 SPINK5Q9NQ38 1064 aaPredicted RBP29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 FANCAO15360 1455 aa29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 MPRIPQ6WCQ1 1025 aa29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 NOL7Q9UMY1 257 aaKnown RBP29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 CCDC173Q0VFZ6 552 aa29.72■■■□□ 2.35
SPIRE1-202ENST00000409402 CEBPZQ03701 1054 aaKnown RBP29.71■■■□□ 2.35
SPIRE1-202ENST00000409402 CAVIN4Q5BKX8 364 aa29.71■■■□□ 2.35
SPIRE1-202ENST00000409402 AIDAQ96BJ3 306 aa29.71■■■□□ 2.35
SPIRE1-202ENST00000409402 BLOC1S2Q6QNY1 142 aa29.71■■■□□ 2.35
SPIRE1-202ENST00000409402 EXOC5O00471 708 aa29.7■■■□□ 2.35
SPIRE1-202ENST00000409402 HSP90AB3PQ58FF7 597 aa29.7■■■□□ 2.35
SPIRE1-202ENST00000409402 KRT28Q7Z3Y7 464 aa29.7■■■□□ 2.35
SPIRE1-202ENST00000409402 HSP90AB2PQ58FF8 381 aa29.7■■■□□ 2.34
SPIRE1-202ENST00000409402 ABCF2Q9UG63 623 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 KRT32Q14532 448 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 MNS1Q8NEH6 495 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 FIBPO43427 364 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 IFIT1P09914 478 aaKnown RBP29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 SYCP1Q15431 976 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 MYD88Q99836 296 aa29.69■■■□□ 2.34
SPIRE1-202ENST00000409402 CWC27Q6UX04 472 aaKnown RBP29.68■■■□□ 2.34
SPIRE1-202ENST00000409402 ADGRF5Q8IZF2 1346 aa29.68■■■□□ 2.34
SPIRE1-202ENST00000409402 RDXP35241 583 aaKnown RBP29.67■■■□□ 2.34
SPIRE1-202ENST00000409402 SMARCE1Q969G3 411 aa29.67■■■□□ 2.34
SPIRE1-202ENST00000409402 RUFY1Q96T51 708 aa29.67■■■□□ 2.34
SPIRE1-202ENST00000409402 THUMPD2Q9BTF0 503 aaKnown RBP29.67■■■□□ 2.34
SPIRE1-202ENST00000409402 ZNF287Q9HBT7 754 aa29.67■■■□□ 2.34
SPIRE1-202ENST00000409402 SMC2O95347 1197 aa29.66■■■□□ 2.34
SPIRE1-202ENST00000409402 CDR1P51861 262 aa29.66■■■□□ 2.34
SPIRE1-202ENST00000409402 PDRG1Q9NUG6 133 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 ABCC11Q96J66 1382 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 IMMTQ16891 758 aaKnown RBP29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 TRIM5Q9C035 493 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 KIF1BPQ96EK5 621 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 ZHX3Q9H4I2 956 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 ANKIB1Q9P2G1 1089 aa29.65■■■□□ 2.34
SPIRE1-202ENST00000409402 MPHOSPH10O00566 681 aaKnown RBP29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 DCTN1Q14203 1278 aa29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 PRPF40AO75400 957 aaKnown RBP29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 SLFN5Q08AF3 891 aa29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 STIM1Q13586 685 aa29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 FMNL2Q96PY5 1086 aa29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 EMILIN1Q9Y6C2 1016 aa29.64■■■□□ 2.34
SPIRE1-202ENST00000409402 RAB11FIP3O75154 756 aa29.64■■■□□ 2.33
SPIRE1-202ENST00000409402 FAM13BQ9NYF5 915 aa29.63■■■□□ 2.33
SPIRE1-202ENST00000409402 TMEM57Q8N5G2 664 aa29.63■■■□□ 2.33
SPIRE1-202ENST00000409402 CADPS2Q86UW7 1296 aa29.63■■■□□ 2.33
SPIRE1-202ENST00000409402 ZSCAN31Q96LW9 406 aaPredicted RBP29.63■■■□□ 2.33
SPIRE1-202ENST00000409402 CAVIN1Q6NZI2 390 aaKnown RBP29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 JAKMIP1Q96N16 626 aaKnown RBP29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 WDR33Q9C0J8 1336 aaKnown RBP29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 NUTM1Q86Y26 1132 aa29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 RNF214Q8ND24 703 aa29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 CAGE1Q8TC20 777 aa29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 TRMT112Q9UI30 125 aaKnown RBP29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 WASF1Q92558 559 aa29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 DACH1Q9UI36 760 aa29.62■■■□□ 2.33
SPIRE1-202ENST00000409402 ME1P48163 572 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 USP5P45974 858 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 SETQ01105 290 aaPredicted RBP29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 IFIT5Q13325 482 aaKnown RBP29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 LARP1BQ659C4 914 aaKnown RBP29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 RPGRQ92834 1020 aaKnown RBP29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 AK7Q96M32 723 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 NOS1P29475 1434 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 ZNF76P36508 570 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 BRPF1P55201 1214 aaPredicted RBP29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 NCOA1Q15788 1441 aa29.61■■■□□ 2.33
SPIRE1-202ENST00000409402 CCDC39Q9UFE4 941 aa29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 TSPY26PQ9H489 355 aa29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 TTC21BQ7Z4L5 1316 aa29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 ARGLU1Q9NWB6 273 aaPredicted RBP29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 HYPKQ9NX55 129 aa29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 NASPP49321 788 aaPredicted RBP29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 ALDH1L2Q3SY69 923 aa29.6■■■□□ 2.33
SPIRE1-202ENST00000409402 ACBD3Q9H3P7 528 aa29.59■■■□□ 2.33
SPIRE1-202ENST00000409402 TNRQ92752 1358 aa29.59■■■□□ 2.33
SPIRE1-202ENST00000409402 DHX29Q7Z478 1369 aaKnown RBP29.59■■■□□ 2.33
SPIRE1-202ENST00000409402 NFKBIBQ15653 356 aa29.59■■■□□ 2.33
SPIRE1-202ENST00000409402 EXOC6BQ9Y2D4 811 aa29.59■■■□□ 2.33
SPIRE1-202ENST00000409402 CRACR2BQ8N4Y2 399 aaPredicted RBP29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 POLR3DP05423 398 aaPredicted RBP29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 KRT85P78386 507 aa29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 PAF1Q8N7H5 531 aa29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 TEX13AQ9BXU3 409 aaPredicted RBP29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 BMP2KQ9NSY1 1161 aaPredicted RBP29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 K7ELQ4 463 aaPredicted RBP29.58■■■□□ 2.33
SPIRE1-202ENST00000409402 GLRX3O76003 335 aaKnown RBP29.57■■■□□ 2.32
SPIRE1-202ENST00000409402 TTLL5Q6EMB2 1281 aa29.57■■■□□ 2.32
SPIRE1-202ENST00000409402 URB2Q14146 1524 aaKnown RBP29.57■■■□□ 2.32
SPIRE1-202ENST00000409402 TRAK2O60296 914 aa29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 PDCL3Q9H2J4 239 aa29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 IFNL2Q8IZJ0 200 aa29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 SLC5A1P13866 664 aa29.56■■■□□ 2.32
SPIRE1-202ENST00000409402 MRE11P49959 708 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms