RNA–Protein interactions for RNA: ENST00000409334.5

COPS8-203, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 5 BASIC

Gene COPS8, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-203ENST00000409334 NBPF6Q5VWK0 638 aa25.64■■□□□ 1.7
COPS8-203ENST00000409334 NBPF4Q96M43 638 aa25.64■■□□□ 1.7
COPS8-203ENST00000409334 ZCRB1Q8TBF4 217 aaKnown RBP25.63■■□□□ 1.69
COPS8-203ENST00000409334 AKT1S1Q96B36 256 aa25.63■■□□□ 1.69
COPS8-203ENST00000409334 TUBGCP6Q96RT7 1819 aa25.63■■□□□ 1.69
COPS8-203ENST00000409334 SLC27A3Q5K4L6 730 aa25.62■■□□□ 1.69
COPS8-203ENST00000409334 SYT17Q9BSW7 474 aa25.62■■□□□ 1.69
COPS8-203ENST00000409334 FHDC1Q9C0D6 1143 aaPredicted RBP25.62■■□□□ 1.69
COPS8-203ENST00000409334 COL24A1Q17RW2 1714 aa25.61■■□□□ 1.69
COPS8-203ENST00000409334 DCAF8L1A6NGE4 600 aa25.61■■□□□ 1.69
COPS8-203ENST00000409334 PRIM1P49642 420 aaKnown RBP25.61■■□□□ 1.69
COPS8-203ENST00000409334 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
COPS8-203ENST00000409334 GOLGB1Q14789 3259 aaKnown RBP25.59■■□□□ 1.69
COPS8-203ENST00000409334 INSRP06213 1382 aa25.59■■□□□ 1.69
COPS8-203ENST00000409334 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
COPS8-203ENST00000409334 HSP90AB2PQ58FF8 381 aa25.58■■□□□ 1.69
COPS8-203ENST00000409334 USHBP1Q8N6Y0 703 aa25.58■■□□□ 1.69
COPS8-203ENST00000409334 SYTL4Q96C24 671 aaPredicted RBP25.58■■□□□ 1.69
COPS8-203ENST00000409334 CGNL1Q0VF96 1302 aa25.58■■□□□ 1.69
COPS8-203ENST00000409334 KIF24Q5T7B8 1368 aa25.57■■□□□ 1.68
COPS8-203ENST00000409334 SMG6Q86US8 1419 aaKnown RBP25.57■■□□□ 1.68
COPS8-203ENST00000409334 FLT4P35916 1363 aa25.56■■□□□ 1.68
COPS8-203ENST00000409334 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
COPS8-203ENST00000409334 KCNQ4P56696 695 aa25.55■■□□□ 1.68
COPS8-203ENST00000409334 ARXQ96QS3 562 aa25.55■■□□□ 1.68
COPS8-203ENST00000409334 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
COPS8-203ENST00000409334 PNPLA7Q6ZV29 1317 aa25.55■■□□□ 1.68
COPS8-203ENST00000409334 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
COPS8-203ENST00000409334 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
COPS8-203ENST00000409334 SLC16A10Q8TF71 515 aa25.53■■□□□ 1.68
COPS8-203ENST00000409334 RAPGEF4Q8WZA2 1011 aa25.53■■□□□ 1.68
COPS8-203ENST00000409334 TATP17735 454 aaPredicted RBP25.5■■□□□ 1.67
COPS8-203ENST00000409334 CHD4Q14839 1912 aa25.5■■□□□ 1.67
COPS8-203ENST00000409334 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
COPS8-203ENST00000409334 PKD1L3Q7Z443 1732 aa25.5■■□□□ 1.67
COPS8-203ENST00000409334 EMILIN1Q9Y6C2 1016 aa25.5■■□□□ 1.67
COPS8-203ENST00000409334 MAP2P11137 1827 aaKnown RBP25.49■■□□□ 1.67
COPS8-203ENST00000409334 TOGARAM1Q9Y4F4 1720 aa25.49■■□□□ 1.67
COPS8-203ENST00000409334 TFCP2L1Q9NZI6 479 aa25.49■■□□□ 1.67
COPS8-203ENST00000409334 PCDH11XQ9BZA7 1347 aa25.48■■□□□ 1.67
COPS8-203ENST00000409334 PCDH11YQ9BZA8 1340 aa25.48■■□□□ 1.67
COPS8-203ENST00000409334 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
COPS8-203ENST00000409334 CCNL1Q9UK58 526 aaPredicted RBP25.48■■□□□ 1.67
COPS8-203ENST00000409334 ITGB4P16144 1822 aa25.47■■□□□ 1.67
COPS8-203ENST00000409334 TAF1LQ8IZX4 1826 aa25.47■■□□□ 1.67
COPS8-203ENST00000409334 C5P01031 1676 aa25.46■■□□□ 1.67
COPS8-203ENST00000409334 CYP27B1O15528 508 aa25.46■■□□□ 1.67
COPS8-203ENST00000409334 WASHC2AQ641Q2 1341 aa25.42■■□□□ 1.66
COPS8-203ENST00000409334 POLD1P28340 1107 aa25.41■■□□□ 1.66
COPS8-203ENST00000409334 COL23A1Q86Y22 540 aaPredicted RBP25.4■■□□□ 1.66
COPS8-203ENST00000409334 PALLDQ8WX93 1383 aa25.39■■□□□ 1.65
COPS8-203ENST00000409334 NKX1-1Q15270 411 aaPredicted RBP25.38■■□□□ 1.65
COPS8-203ENST00000409334 MPRIPQ6WCQ1 1025 aa25.38■■□□□ 1.65
COPS8-203ENST00000409334 ZNF784Q8NCA9 323 aaPredicted RBP25.38■■□□□ 1.65
COPS8-203ENST00000409334 POLKQ9UBT6 870 aa25.38■■□□□ 1.65
COPS8-203ENST00000409334 PPM1GO15355 546 aaPredicted RBP25.37■■□□□ 1.65
COPS8-203ENST00000409334 EYA1Q99502 592 aa25.37■■□□□ 1.65
COPS8-203ENST00000409334 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
COPS8-203ENST00000409334 C4BP0C0L5 1744 aa25.34■■□□□ 1.65
COPS8-203ENST00000409334 NLGN2Q8NFZ4 835 aa25.34■■□□□ 1.65
COPS8-203ENST00000409334 UBR3Q6ZT12 1888 aa25.33■■□□□ 1.65
COPS8-203ENST00000409334 KLHL34Q8N239 644 aa25.33■■□□□ 1.65
COPS8-203ENST00000409334 PIGBQ92521 554 aa25.33■■□□□ 1.65
COPS8-203ENST00000409334 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.33■■□□□ 1.65
COPS8-203ENST00000409334 SPG7Q9UQ90 795 aa25.32■■□□□ 1.64
COPS8-203ENST00000409334 GPR162Q16538 588 aa25.31■■□□□ 1.64
COPS8-203ENST00000409334 SMARCC1Q92922 1105 aaPredicted RBP25.31■■□□□ 1.64
COPS8-203ENST00000409334 MSH5O43196 834 aa25.3■■□□□ 1.64
COPS8-203ENST00000409334 HMGB2P26583 209 aaKnown RBP25.3■■□□□ 1.64
COPS8-203ENST00000409334 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
COPS8-203ENST00000409334 EIF4A2Q14240 407 aaKnown RBP25.29■■□□□ 1.64
COPS8-203ENST00000409334 POLR3GLQ9BT43 218 aa25.29■■□□□ 1.64
COPS8-203ENST00000409334 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
COPS8-203ENST00000409334 MSL1Q68DK7 614 aa25.28■■□□□ 1.64
COPS8-203ENST00000409334 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
COPS8-203ENST00000409334 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
COPS8-203ENST00000409334 PHKG2P15735 406 aa25.27■■□□□ 1.64
COPS8-203ENST00000409334 PLEKHG2Q9H7P9 1386 aa25.27■■□□□ 1.64
COPS8-203ENST00000409334 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
COPS8-203ENST00000409334 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
COPS8-203ENST00000409334 IGSF1Q8N6C5 1336 aa25.24■■□□□ 1.63
COPS8-203ENST00000409334 LOC102724428A0A0B4J2F2 783 aa25.24■■□□□ 1.63
COPS8-203ENST00000409334 SIK1P57059 783 aa25.24■■□□□ 1.63
COPS8-203ENST00000409334 PANK3Q9H999 370 aa25.24■■□□□ 1.63
COPS8-203ENST00000409334 YBX3P16989 372 aaKnown RBP eCLIP25.23■■□□□ 1.63
COPS8-203ENST00000409334 AK7Q96M32 723 aa25.23■■□□□ 1.63
COPS8-203ENST00000409334 ASAP1Q9ULH1 1129 aa25.23■■□□□ 1.63
COPS8-203ENST00000409334 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
COPS8-203ENST00000409334 LINC00116Q8NCU8 138 aa25.22■■□□□ 1.63
COPS8-203ENST00000409334 TMOD3Q9NYL9 352 aa25.22■■□□□ 1.63
COPS8-203ENST00000409334 SMIM5Q71RC9 77 aa25.21■■□□□ 1.63
COPS8-203ENST00000409334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.2■■□□□ 1.62
COPS8-203ENST00000409334 CD2APQ9Y5K6 639 aa25.2■■□□□ 1.62
COPS8-203ENST00000409334 SSFA2P28290 1259 aa25.19■■□□□ 1.62
COPS8-203ENST00000409334 ITPK1Q13572 414 aa25.19■■□□□ 1.62
COPS8-203ENST00000409334 ATG3Q9NT62 314 aa25.19■■□□□ 1.62
COPS8-203ENST00000409334 ZNF831Q5JPB2 1677 aa25.18■■□□□ 1.62
COPS8-203ENST00000409334 PHF14O94880 888 aa25.18■■□□□ 1.62
COPS8-203ENST00000409334 KDRP35968 1356 aa25.17■■□□□ 1.62
COPS8-203ENST00000409334 GRIN3BO60391 1043 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms