RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 GAS2L2Q8NHY3 880 aa22.08■■□□□ 1.13
SSB-202ENST00000409333 LRRC37A3O60309 1634 aa22.08■■□□□ 1.12
SSB-202ENST00000409333 GOLGA2Q08379 1002 aa22.07■■□□□ 1.12
SSB-202ENST00000409333 USP35Q9P2H5 1018 aa22.07■■□□□ 1.12
SSB-202ENST00000409333 BCL9LQ86UU0 1499 aa22.07■■□□□ 1.12
SSB-202ENST00000409333 NGLY1Q96IV0 654 aa22.07■■□□□ 1.12
SSB-202ENST00000409333 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
SSB-202ENST00000409333 TATP17735 454 aaPredicted RBP22.06■■□□□ 1.12
SSB-202ENST00000409333 OVOS2A0A0G2JMS6 1433 aa22.06■■□□□ 1.12
SSB-202ENST00000409333 SCN11AQ9UI33 1791 aa22.05■■□□□ 1.12
SSB-202ENST00000409333 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 PLEKHO1Q53GL0 409 aaPredicted RBP22.04■■□□□ 1.12
SSB-202ENST00000409333 MEX3CQ5U5Q3 659 aaKnown RBP22.04■■□□□ 1.12
SSB-202ENST00000409333 WDR63Q8IWG1 891 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 THUMPD2Q9BTF0 503 aaKnown RBP22.04■■□□□ 1.12
SSB-202ENST00000409333 MAP3K5Q99683 1374 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 AMOTQ4VCS5 1084 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 FBXO41Q8TF61 875 aa22.04■■□□□ 1.12
SSB-202ENST00000409333 PLEKHG2Q9H7P9 1386 aa22.03■■□□□ 1.12
SSB-202ENST00000409333 SLFN5Q08AF3 891 aa22.03■■□□□ 1.12
SSB-202ENST00000409333 FNBP4Q8N3X1 1017 aaPredicted RBP22.03■■□□□ 1.12
SSB-202ENST00000409333 ADAMTS7Q9UKP4 1686 aa22.02■■□□□ 1.12
SSB-202ENST00000409333 ZNF530Q6P9A1 599 aaPredicted RBP22.02■■□□□ 1.12
SSB-202ENST00000409333 UNC5CLQ8IV45 518 aa22.02■■□□□ 1.12
SSB-202ENST00000409333 IL2RBP14784 551 aa22.02■■□□□ 1.11
SSB-202ENST00000409333 MCM10Q7L590 875 aa22.02■■□□□ 1.11
SSB-202ENST00000409333 DISP2A7MBM2 1401 aa22.01■■□□□ 1.11
SSB-202ENST00000409333 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
SSB-202ENST00000409333 SPATA31A1Q5TZJ5 1347 aa22.01■■□□□ 1.11
SSB-202ENST00000409333 E9PSI1 815 aa22■■□□□ 1.11
SSB-202ENST00000409333 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
SSB-202ENST00000409333 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 TRMT2AQ8IZ69 625 aaKnown RBP21.99■■□□□ 1.11
SSB-202ENST00000409333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.116e-8■■■■□ 21.2
SSB-202ENST00000409333 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
SSB-202ENST00000409333 USP21Q9UK80 565 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 SPG7Q9UQ90 795 aa21.99■■□□□ 1.11
SSB-202ENST00000409333 IL16Q14005 1332 aa21.98■■□□□ 1.11
SSB-202ENST00000409333 AFF2P51816 1311 aa21.97■■□□□ 1.11
SSB-202ENST00000409333 HTATSF1O43719 755 aaKnown RBP21.97■■□□□ 1.11
SSB-202ENST00000409333 C1orf141Q5JVX7 400 aa21.97■■□□□ 1.11
SSB-202ENST00000409333 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
SSB-202ENST00000409333 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
SSB-202ENST00000409333 CALD1Q05682 793 aaKnown RBP21.95■■□□□ 1.1
SSB-202ENST00000409333 VPS72Q15906 364 aa21.95■■□□□ 1.1
SSB-202ENST00000409333 ZCRB1Q8TBF4 217 aaKnown RBP21.95■■□□□ 1.1
SSB-202ENST00000409333 GLI3P10071 1580 aa21.95■■□□□ 1.1
SSB-202ENST00000409333 CYP27B1O15528 508 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 PHKG2P15735 406 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 MPRIPQ6WCQ1 1025 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 TSR2Q969E8 191 aaKnown RBP21.94■■□□□ 1.1
SSB-202ENST00000409333 LAS1LQ9Y4W2 734 aaKnown RBP21.94■■□□□ 1.1
SSB-202ENST00000409333 CEMIPQ8WUJ3 1361 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 LGR6Q9HBX8 967 aa21.94■■□□□ 1.1
SSB-202ENST00000409333 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
SSB-202ENST00000409333 KDM6AO15550 1401 aaPredicted RBP21.94■■□□□ 1.1
SSB-202ENST00000409333 KDM3BQ7LBC6 1761 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 TOGARAM1Q9Y4F4 1720 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 MYH16Q9H6N6 1097 aa21.93■■□□□ 1.1
SSB-202ENST00000409333 IFT57Q9NWB7 429 aa21.92■■□□□ 1.1
SSB-202ENST00000409333 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
SSB-202ENST00000409333 TNS2Q63HR2 1409 aa21.91■■□□□ 1.1
SSB-202ENST00000409333 GNAI1P63096 354 aa21.91■■□□□ 1.1
SSB-202ENST00000409333 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
SSB-202ENST00000409333 KAT6BQ8WYB5 2073 aa21.91■■□□□ 1.1
SSB-202ENST00000409333 THSD7AQ9UPZ6 1657 aa21.9■■□□□ 1.1
SSB-202ENST00000409333 RNMTO43148 476 aaKnown RBP21.9■■□□□ 1.1
SSB-202ENST00000409333 ITGB4P16144 1822 aa21.9■■□□□ 1.1
SSB-202ENST00000409333 ATRNO75882 1429 aa21.9■■□□□ 1.1
SSB-202ENST00000409333 BARGINQ6ZT62 677 aa21.89■■□□□ 1.1
SSB-202ENST00000409333 MBIPQ9NS73 344 aa21.89■■□□□ 1.1
SSB-202ENST00000409333 CDCA7Q9BWT1 371 aaPredicted RBP21.89■■□□□ 1.09
SSB-202ENST00000409333 DDX54Q8TDD1 881 aaKnown RBP21.88■■□□□ 1.09
SSB-202ENST00000409333 MRC1P22897 1456 aa21.87■■□□□ 1.09
SSB-202ENST00000409333 FAM98CQ17RN3 349 aaKnown RBP21.87■■□□□ 1.09
SSB-202ENST00000409333 DOT1LQ8TEK3 1739 aa21.87■■□□□ 1.09
SSB-202ENST00000409333 CHL1O00533 1208 aa21.87■■□□□ 1.09
SSB-202ENST00000409333 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
SSB-202ENST00000409333 EXOC5O00471 708 aa21.85■■□□□ 1.09
SSB-202ENST00000409333 HSP90AB1P08238 724 aaKnown RBP21.85■■□□□ 1.09
SSB-202ENST00000409333 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
SSB-202ENST00000409333 DCAF5Q96JK2 942 aa21.85■■□□□ 1.09
SSB-202ENST00000409333 TRPC5Q9UL62 973 aaPredicted RBP21.85■■□□□ 1.09
SSB-202ENST00000409333 GJD4Q96KN9 370 aaPredicted RBP21.84■■□□□ 1.09
SSB-202ENST00000409333 TEFQ10587 303 aa21.84■■□□□ 1.09
SSB-202ENST00000409333 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
SSB-202ENST00000409333 DDB1Q16531 1140 aa21.84■■□□□ 1.09
SSB-202ENST00000409333 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
SSB-202ENST00000409333 NKX1-1Q15270 411 aaPredicted RBP21.83■■□□□ 1.09
SSB-202ENST00000409333 RCAN3Q9UKA8 241 aa21.83■■□□□ 1.09
SSB-202ENST00000409333 QTRT2Q9H974 415 aaKnown RBP21.82■■□□□ 1.08
SSB-202ENST00000409333 BRWD3Q6RI45 1802 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms