RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 C5P01031 1676 aa18.48■□□□□ 0.55
CHRNA1-203ENST00000409219 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
CHRNA1-203ENST00000409219 COL23A1Q86Y22 540 aaPredicted RBP18.47■□□□□ 0.55
CHRNA1-203ENST00000409219 MSL1Q68DK7 614 aa18.46■□□□□ 0.55
CHRNA1-203ENST00000409219 RGPD2P0DJD1 1756 aa18.46■□□□□ 0.55
CHRNA1-203ENST00000409219 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
CHRNA1-203ENST00000409219 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.54
CHRNA1-203ENST00000409219 MSH5O43196 834 aa18.45■□□□□ 0.54
CHRNA1-203ENST00000409219 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
CHRNA1-203ENST00000409219 EDC4Q6P2E9 1401 aaKnown RBP18.44■□□□□ 0.54
CHRNA1-203ENST00000409219 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
CHRNA1-203ENST00000409219 MEGF6O75095 1541 aa18.44■□□□□ 0.54
CHRNA1-203ENST00000409219 TAF1LQ8IZX4 1826 aa18.43■□□□□ 0.54
CHRNA1-203ENST00000409219 IP6K1Q92551 441 aa18.42■□□□□ 0.54
CHRNA1-203ENST00000409219 CD2APQ9Y5K6 639 aa18.42■□□□□ 0.54
CHRNA1-203ENST00000409219 LTV1Q96GA3 475 aaPredicted RBP18.41■□□□□ 0.54
CHRNA1-203ENST00000409219 USP47Q96K76 1375 aa18.41■□□□□ 0.54
CHRNA1-203ENST00000409219 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
CHRNA1-203ENST00000409219 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
CHRNA1-203ENST00000409219 ZCRB1Q8TBF4 217 aaKnown RBP18.39■□□□□ 0.53
CHRNA1-203ENST00000409219 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
CHRNA1-203ENST00000409219 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 KIF3CO14782 793 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 SLC12A5Q9H2X9 1139 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 UBR3Q6ZT12 1888 aa18.36■□□□□ 0.53
CHRNA1-203ENST00000409219 WWC3Q9ULE0 1092 aa18.35■□□□□ 0.53
CHRNA1-203ENST00000409219 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
CHRNA1-203ENST00000409219 HOXC9P31274 260 aa18.34■□□□□ 0.53
CHRNA1-203ENST00000409219 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.53
CHRNA1-203ENST00000409219 PALLDQ8WX93 1383 aa18.33■□□□□ 0.53
CHRNA1-203ENST00000409219 AMIGO3Q86WK7 504 aa18.33■□□□□ 0.52
CHRNA1-203ENST00000409219 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
CHRNA1-203ENST00000409219 FBLN1P23142 703 aa18.31■□□□□ 0.52
CHRNA1-203ENST00000409219 ITGB4P16144 1822 aa18.3■□□□□ 0.52
CHRNA1-203ENST00000409219 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
CHRNA1-203ENST00000409219 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
CHRNA1-203ENST00000409219 AMPHP49418 695 aa18.29■□□□□ 0.52
CHRNA1-203ENST00000409219 APLP1P51693 650 aa18.29■□□□□ 0.52
CHRNA1-203ENST00000409219 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CHRNA1-203ENST00000409219 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
CHRNA1-203ENST00000409219 NBPF6Q5VWK0 638 aa18.28■□□□□ 0.52
CHRNA1-203ENST00000409219 USHBP1Q8N6Y0 703 aa18.28■□□□□ 0.52
CHRNA1-203ENST00000409219 NBPF4Q96M43 638 aa18.28■□□□□ 0.52
CHRNA1-203ENST00000409219 WDR90Q96KV7 1748 aa18.28■□□□□ 0.52
CHRNA1-203ENST00000409219 MAP2P11137 1827 aaKnown RBP18.27■□□□□ 0.52
CHRNA1-203ENST00000409219 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
CHRNA1-203ENST00000409219 DNAJC5GQ8N7S2 189 aa18.27■□□□□ 0.52
CHRNA1-203ENST00000409219 COG3Q96JB2 828 aa18.27■□□□□ 0.52
CHRNA1-203ENST00000409219 AK7Q96M32 723 aa18.27■□□□□ 0.52
CHRNA1-203ENST00000409219 PHF14O94880 888 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
CHRNA1-203ENST00000409219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
CHRNA1-203ENST00000409219 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
CHRNA1-203ENST00000409219 MPRIPQ6WCQ1 1025 aa18.25■□□□□ 0.51
CHRNA1-203ENST00000409219 PKD1L3Q7Z443 1732 aa18.25■□□□□ 0.51
CHRNA1-203ENST00000409219 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
CHRNA1-203ENST00000409219 TOMM70O94826 608 aa18.24■□□□□ 0.51
CHRNA1-203ENST00000409219 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
CHRNA1-203ENST00000409219 SMG6Q86US8 1419 aaKnown RBP18.24■□□□□ 0.51
CHRNA1-203ENST00000409219 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
CHRNA1-203ENST00000409219 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
CHRNA1-203ENST00000409219 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
CHRNA1-203ENST00000409219 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CHRNA1-203ENST00000409219 PUS7Q96PZ0 661 aaKnown RBP18.22■□□□□ 0.51
CHRNA1-203ENST00000409219 CYP27B1O15528 508 aa18.21■□□□□ 0.51
CHRNA1-203ENST00000409219 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
CHRNA1-203ENST00000409219 SMARCC1Q92922 1105 aaPredicted RBP18.21■□□□□ 0.51
CHRNA1-203ENST00000409219 PCNTO95613 3336 aa18.2■□□□□ 0.5
CHRNA1-203ENST00000409219 LINC00116Q8NCU8 138 aa18.2■□□□□ 0.5
CHRNA1-203ENST00000409219 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
CHRNA1-203ENST00000409219 NMRK2Q9NPI5 230 aa18.19■□□□□ 0.5
CHRNA1-203ENST00000409219 INSRP06213 1382 aa18.18■□□□□ 0.5
CHRNA1-203ENST00000409219 PIGBQ92521 554 aa18.18■□□□□ 0.5
CHRNA1-203ENST00000409219 COL13A1Q5TAT6 717 aaPredicted RBP18.17■□□□□ 0.5
CHRNA1-203ENST00000409219 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
CHRNA1-203ENST00000409219 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
CHRNA1-203ENST00000409219 SIK1P57059 783 aa18.16■□□□□ 0.5
CHRNA1-203ENST00000409219 HSP90AB2PQ58FF8 381 aa18.16■□□□□ 0.5
CHRNA1-203ENST00000409219 BCS1LQ9Y276 419 aa18.16■□□□□ 0.5
CHRNA1-203ENST00000409219 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
CHRNA1-203ENST00000409219 GNPATO15228 680 aa18.15■□□□□ 0.5
CHRNA1-203ENST00000409219 MMP10P09238 476 aa18.15■□□□□ 0.5
CHRNA1-203ENST00000409219 HTRA3P83110 453 aa18.15■□□□□ 0.5
CHRNA1-203ENST00000409219 KLRG1Q96E93 195 aa18.15■□□□□ 0.5
CHRNA1-203ENST00000409219 FLT4P35916 1363 aa18.15■□□□□ 0.5
CHRNA1-203ENST00000409219 ITPK1Q13572 414 aa18.14■□□□□ 0.5
CHRNA1-203ENST00000409219 TESK2Q96S53 571 aa18.14■□□□□ 0.5
CHRNA1-203ENST00000409219 GGNBP2Q9H3C7 697 aa18.14■□□□□ 0.5
CHRNA1-203ENST00000409219 ARFGEF1Q9Y6D6 1849 aa18.14■□□□□ 0.49
CHRNA1-203ENST00000409219 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
CHRNA1-203ENST00000409219 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
CHRNA1-203ENST00000409219 RBM46Q8TBY0 533 aaKnown RBP18.14■□□□□ 0.49
CHRNA1-203ENST00000409219 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms