RNA–Protein interactions for RNA: ENST00000409181.1

SUMO1-204, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-204ENST00000409181 SOCS7O14512 581 aa19.88■□□□□ 0.77
SUMO1-204ENST00000409181 TATP17735 454 aaPredicted RBP19.88■□□□□ 0.77
SUMO1-204ENST00000409181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.88■□□□□ 0.77
SUMO1-204ENST00000409181 MARCH10Q8NA82 808 aaPredicted RBP19.87■□□□□ 0.77
SUMO1-204ENST00000409181 SHANK3Q9BYB0 1731 aa19.87■□□□□ 0.77
SUMO1-204ENST00000409181 PKD1L3Q7Z443 1732 aa19.86■□□□□ 0.77
SUMO1-204ENST00000409181 FAM196AQ6ZSG2 479 aa19.86■□□□□ 0.77
SUMO1-204ENST00000409181 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
SUMO1-204ENST00000409181 SULT6B1Q6IMI4 303 aa19.85■□□□□ 0.77
SUMO1-204ENST00000409181 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
SUMO1-204ENST00000409181 CCDC125Q86Z20 511 aa19.83■□□□□ 0.77
SUMO1-204ENST00000409181 AEBP1Q8IUX7 1158 aa19.83■□□□□ 0.77
SUMO1-204ENST00000409181 UPF1Q92900 1129 aaKnown RBP eCLIP19.83■□□□□ 0.77
SUMO1-204ENST00000409181 FAM182BQ5T319 152 aa19.81■□□□□ 0.76
SUMO1-204ENST00000409181 SPG7Q9UQ90 795 aa19.81■□□□□ 0.76
SUMO1-204ENST00000409181 PCDH11XQ9BZA7 1347 aa19.8■□□□□ 0.76
SUMO1-204ENST00000409181 PCDH11YQ9BZA8 1340 aa19.8■□□□□ 0.76
SUMO1-204ENST00000409181 ANP32CO43423 234 aa19.8■□□□□ 0.76
SUMO1-204ENST00000409181 AMOTQ4VCS5 1084 aa19.8■□□□□ 0.76
SUMO1-204ENST00000409181 SBF2Q86WG5 1849 aa19.8■□□□□ 0.76
SUMO1-204ENST00000409181 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
SUMO1-204ENST00000409181 NKX1-1Q15270 411 aaPredicted RBP19.79■□□□□ 0.76
SUMO1-204ENST00000409181 CYP27B1O15528 508 aa19.78■□□□□ 0.76
SUMO1-204ENST00000409181 FCHSD2O94868 740 aa19.78■□□□□ 0.76
SUMO1-204ENST00000409181 HMOX1P09601 288 aa19.78■□□□□ 0.76
SUMO1-204ENST00000409181 PLEKHO1Q53GL0 409 aaPredicted RBP19.78■□□□□ 0.76
SUMO1-204ENST00000409181 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
SUMO1-204ENST00000409181 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
SUMO1-204ENST00000409181 IFNL2Q8IZJ0 200 aa19.76■□□□□ 0.75
SUMO1-204ENST00000409181 U2AF1L5P0DN76 240 aaPredicted RBP19.75■□□□□ 0.75
SUMO1-204ENST00000409181 PHKG2P15735 406 aa19.75■□□□□ 0.75
SUMO1-204ENST00000409181 U2AF1Q01081 240 aaKnown RBP eCLIP19.75■□□□□ 0.75
SUMO1-204ENST00000409181 EP400Q96L91 3159 aa19.75■□□□□ 0.75
SUMO1-204ENST00000409181 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
SUMO1-204ENST00000409181 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
SUMO1-204ENST00000409181 BCL11BQ9C0K0 894 aaPredicted RBP19.73■□□□□ 0.75
SUMO1-204ENST00000409181 TRIM37O94972 964 aa19.72■□□□□ 0.75
SUMO1-204ENST00000409181 PRKAR2BP31323 418 aa19.71■□□□□ 0.75
SUMO1-204ENST00000409181 HSP90AB1P08238 724 aaKnown RBP19.7■□□□□ 0.74
SUMO1-204ENST00000409181 MTHFSDQ2M296 383 aaKnown RBP19.7■□□□□ 0.74
SUMO1-204ENST00000409181 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
SUMO1-204ENST00000409181 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
SUMO1-204ENST00000409181 DOT1LQ8TEK3 1739 aa19.69■□□□□ 0.74
SUMO1-204ENST00000409181 AKAP4Q5JQC9 854 aa19.69■□□□□ 0.74
SUMO1-204ENST00000409181 ZNF530Q6P9A1 599 aaPredicted RBP19.69■□□□□ 0.74
SUMO1-204ENST00000409181 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
SUMO1-204ENST00000409181 KCNQ2O43526 872 aa19.68■□□□□ 0.74
SUMO1-204ENST00000409181 SF3B2Q13435 895 aaKnown RBP19.68■□□□□ 0.74
SUMO1-204ENST00000409181 DCAF5Q96JK2 942 aa19.68■□□□□ 0.74
SUMO1-204ENST00000409181 PHACTR3Q96KR7 559 aa19.68■□□□□ 0.74
SUMO1-204ENST00000409181 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
SUMO1-204ENST00000409181 PLSCR1O15162 318 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 CCDC184Q52MB2 194 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 C1orf141Q5JVX7 400 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 PTF1AQ7RTS3 328 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 ACSBG1Q96GR2 724 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 ADAMTS7Q9UKP4 1686 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 RGPD3A6NKT7 1758 aaPredicted RBP19.67■□□□□ 0.74
SUMO1-204ENST00000409181 RGPD4Q7Z3J3 1758 aa19.67■□□□□ 0.74
SUMO1-204ENST00000409181 BAG6P46379 1132 aa19.66■□□□□ 0.74
SUMO1-204ENST00000409181 KDM6AO15550 1401 aaPredicted RBP19.66■□□□□ 0.74
SUMO1-204ENST00000409181 ITGB4P16144 1822 aa19.65■□□□□ 0.74
SUMO1-204ENST00000409181 ERVV-2B6SEH9 535 aa19.65■□□□□ 0.74
SUMO1-204ENST00000409181 PRIM1P49642 420 aaKnown RBP19.65■□□□□ 0.74
SUMO1-204ENST00000409181 APBA3O96018 575 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 WDR43Q15061 677 aaKnown RBP eCLIP19.64■□□□□ 0.73
SUMO1-204ENST00000409181 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 ADAMTS8Q9UP79 889 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 SCN11AQ9UI33 1791 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 BTAF1O14981 1849 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 KAT6BQ8WYB5 2073 aa19.64■□□□□ 0.73
SUMO1-204ENST00000409181 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
SUMO1-204ENST00000409181 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
SUMO1-204ENST00000409181 DEFB132Q7Z7B7 95 aa19.62■□□□□ 0.73
SUMO1-204ENST00000409181 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
SUMO1-204ENST00000409181 VIRMAQ69YN4 1812 aaKnown RBP19.61■□□□□ 0.73
SUMO1-204ENST00000409181 GNAT3A8MTJ3 354 aa19.61■□□□□ 0.73
SUMO1-204ENST00000409181 HTATSF1O43719 755 aaKnown RBP19.61■□□□□ 0.73
SUMO1-204ENST00000409181 NEFMP07197 916 aa19.61■□□□□ 0.73
SUMO1-204ENST00000409181 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
SUMO1-204ENST00000409181 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
SUMO1-204ENST00000409181 RNMTO43148 476 aaKnown RBP19.6■□□□□ 0.73
SUMO1-204ENST00000409181 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
SUMO1-204ENST00000409181 MRC1P22897 1456 aa19.6■□□□□ 0.73
SUMO1-204ENST00000409181 PIGBQ92521 554 aa19.59■□□□□ 0.73
SUMO1-204ENST00000409181 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
SUMO1-204ENST00000409181 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
SUMO1-204ENST00000409181 LGR6Q9HBX8 967 aa19.59■□□□□ 0.73
SUMO1-204ENST00000409181 CEMIPQ8WUJ3 1361 aa19.58■□□□□ 0.73
SUMO1-204ENST00000409181 MAPK8IP3Q9UPT6 1336 aa19.58■□□□□ 0.73
SUMO1-204ENST00000409181 CCER2I3L3R5 266 aa19.58■□□□□ 0.72
SUMO1-204ENST00000409181 NFE2L2Q16236 605 aa19.58■□□□□ 0.72
SUMO1-204ENST00000409181 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
SUMO1-204ENST00000409181 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
SUMO1-204ENST00000409181 RREB1Q92766 1687 aa19.58■□□□□ 0.72
SUMO1-204ENST00000409181 LY75O60449 1722 aa19.57■□□□□ 0.72
SUMO1-204ENST00000409181 EZH2Q15910 746 aaKnown RBP19.57■□□□□ 0.72
SUMO1-204ENST00000409181 PROM2Q8N271 834 aa19.57■□□□□ 0.72
SUMO1-204ENST00000409181 DLG5Q8TDM6 1919 aa19.57■□□□□ 0.72
SUMO1-204ENST00000409181 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms