RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PTF1AQ7RTS3 328 aa24.36■■□□□ 1.49
PDLIM2-206ENST00000409141 ACSBG1Q96GR2 724 aa24.35■■□□□ 1.49
PDLIM2-206ENST00000409141 MTHFSP49914 203 aa24.34■■□□□ 1.49
PDLIM2-206ENST00000409141 KCNQ2O43526 872 aa24.33■■□□□ 1.49
PDLIM2-206ENST00000409141 SBF2Q86WG5 1849 aa24.33■■□□□ 1.48
PDLIM2-206ENST00000409141 NCAPD2Q15021 1401 aa24.31■■□□□ 1.48
PDLIM2-206ENST00000409141 PARD3Q8TEW0 1356 aa24.3■■□□□ 1.48
PDLIM2-206ENST00000409141 PLSCR1O15162 318 aa24.3■■□□□ 1.48
PDLIM2-206ENST00000409141 IGSF1Q8N6C5 1336 aa24.29■■□□□ 1.48
PDLIM2-206ENST00000409141 SPG7Q9UQ90 795 aa24.28■■□□□ 1.48
PDLIM2-206ENST00000409141 PCDH11XQ9BZA7 1347 aa24.28■■□□□ 1.48
PDLIM2-206ENST00000409141 PCDH11YQ9BZA8 1340 aa24.28■■□□□ 1.48
PDLIM2-206ENST00000409141 IL13P35225 146 aa24.27■■□□□ 1.48
PDLIM2-206ENST00000409141 KAT6BQ8WYB5 2073 aa24.27■■□□□ 1.48
PDLIM2-206ENST00000409141 SYTL4Q96C24 671 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-206ENST00000409141 CYP27B1O15528 508 aa24.25■■□□□ 1.47
PDLIM2-206ENST00000409141 PRIM1P49642 420 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-206ENST00000409141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.47
PDLIM2-206ENST00000409141 SHANK3Q9BYB0 1731 aa24.23■■□□□ 1.47
PDLIM2-206ENST00000409141 NHSQ6T4R5 1651 aa24.23■■□□□ 1.47
PDLIM2-206ENST00000409141 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
PDLIM2-206ENST00000409141 SULT6B1Q6IMI4 303 aa24.22■■□□□ 1.47
PDLIM2-206ENST00000409141 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
PDLIM2-206ENST00000409141 NBPF14Q5TI25 921 aa24.21■■□□□ 1.47
PDLIM2-206ENST00000409141 AEBP1Q8IUX7 1158 aa24.21■■□□□ 1.47
PDLIM2-206ENST00000409141 PSDA5PKW4 1024 aaPredicted RBP24.2■■□□□ 1.47
PDLIM2-206ENST00000409141 PROM2Q8N271 834 aa24.2■■□□□ 1.47
PDLIM2-206ENST00000409141 TXNRD1Q16881 649 aa24.19■■□□□ 1.46
PDLIM2-206ENST00000409141 R3HDM1Q15032 1099 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-206ENST00000409141 PLEKHO1Q53GL0 409 aaPredicted RBP24.19■■□□□ 1.46
PDLIM2-206ENST00000409141 IFNL2Q8IZJ0 200 aa24.19■■□□□ 1.46
PDLIM2-206ENST00000409141 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
PDLIM2-206ENST00000409141 PKD1L3Q7Z443 1732 aa24.18■■□□□ 1.46
PDLIM2-206ENST00000409141 NKX1-1Q15270 411 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-206ENST00000409141 CFAP53Q96M91 514 aa24.17■■□□□ 1.46
PDLIM2-206ENST00000409141 RREB1Q92766 1687 aa24.17■■□□□ 1.46
PDLIM2-206ENST00000409141 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
PDLIM2-206ENST00000409141 PHKG2P15735 406 aa24.16■■□□□ 1.46
PDLIM2-206ENST00000409141 AMOTQ4VCS5 1084 aa24.16■■□□□ 1.46
PDLIM2-206ENST00000409141 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-206ENST00000409141 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
PDLIM2-206ENST00000409141 HMOX1P09601 288 aa24.15■■□□□ 1.46
PDLIM2-206ENST00000409141 KDRP35968 1356 aa24.15■■□□□ 1.46
PDLIM2-206ENST00000409141 BTAF1O14981 1849 aa24.15■■□□□ 1.46
PDLIM2-206ENST00000409141 DOT1LQ8TEK3 1739 aa24.14■■□□□ 1.46
PDLIM2-206ENST00000409141 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
PDLIM2-206ENST00000409141 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
PDLIM2-206ENST00000409141 NUP188Q5SRE5 1749 aa24.13■■□□□ 1.45
PDLIM2-206ENST00000409141 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
PDLIM2-206ENST00000409141 COL3A1P02461 1466 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-206ENST00000409141 HSP90AB1P08238 724 aaKnown RBP24.09■■□□□ 1.45
PDLIM2-206ENST00000409141 C1orf141Q5JVX7 400 aa24.09■■□□□ 1.45
PDLIM2-206ENST00000409141 ANO8Q9HCE9 1232 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-206ENST00000409141 NUDCQ9Y266 331 aa24.08■■□□□ 1.45
PDLIM2-206ENST00000409141 SLC27A3Q5K4L6 730 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 PIGBQ92521 554 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 DCAF5Q96JK2 942 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 LRRC4BQ9NT99 713 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 STK32BQ9NY57 414 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 TMOD3Q9NYL9 352 aa24.07■■□□□ 1.44
PDLIM2-206ENST00000409141 RALBP1Q15311 655 aa24.05■■□□□ 1.44
PDLIM2-206ENST00000409141 SLC15A2Q16348 729 aa24.05■■□□□ 1.44
PDLIM2-206ENST00000409141 ERVV-2B6SEH9 535 aa24.04■■□□□ 1.44
PDLIM2-206ENST00000409141 KCNQ4P56696 695 aa24.04■■□□□ 1.44
PDLIM2-206ENST00000409141 SMARCC1Q92922 1105 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-206ENST00000409141 CCNL1Q9UK58 526 aaPredicted RBP24.04■■□□□ 1.44
PDLIM2-206ENST00000409141 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
PDLIM2-206ENST00000409141 U2AF1L5P0DN76 240 aaPredicted RBP24.02■■□□□ 1.44
PDLIM2-206ENST00000409141 U2AF1Q01081 240 aaKnown RBP eCLIP24.02■■□□□ 1.44
PDLIM2-206ENST00000409141 AKAP4Q5JQC9 854 aa24.02■■□□□ 1.44
PDLIM2-206ENST00000409141 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
PDLIM2-206ENST00000409141 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
PDLIM2-206ENST00000409141 ITGB4P16144 1822 aa24.01■■□□□ 1.43
PDLIM2-206ENST00000409141 CABP4P57796 275 aa24■■□□□ 1.43
PDLIM2-206ENST00000409141 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-206ENST00000409141 ZNF316A6NFI3 1004 aaPredicted RBP23.99■■□□□ 1.43
PDLIM2-206ENST00000409141 ASAP1Q9ULH1 1129 aa23.99■■□□□ 1.43
PDLIM2-206ENST00000409141 PRKAR2BP31323 418 aa23.97■■□□□ 1.43
PDLIM2-206ENST00000409141 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
PDLIM2-206ENST00000409141 RSPH6AQ9H0K4 717 aa23.97■■□□□ 1.43
PDLIM2-206ENST00000409141 LY75O60449 1722 aa23.97■■□□□ 1.43
PDLIM2-206ENST00000409141 AKT1S1Q96B36 256 aa23.96■■□□□ 1.43
PDLIM2-206ENST00000409141 ATG3Q9NT62 314 aa23.96■■□□□ 1.43
PDLIM2-206ENST00000409141 FCHSD2O94868 740 aa23.95■■□□□ 1.42
PDLIM2-206ENST00000409141 NFATC2IPQ8NCF5 419 aa23.95■■□□□ 1.42
PDLIM2-206ENST00000409141 LGR6Q9HBX8 967 aa23.95■■□□□ 1.42
PDLIM2-206ENST00000409141 HMGB2P26583 209 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 GAS2L2Q8NHY3 880 aa23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 PHACTR3Q96KR7 559 aa23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 PDGFDQ9GZP0 370 aaPredicted RBP23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 PAPPAQ13219 1627 aa23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 MYBBP1AQ9BQG0 1328 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 RNMTO43148 476 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
PDLIM2-206ENST00000409141 LOC102724428A0A0B4J2F2 783 aa23.93■■□□□ 1.42
PDLIM2-206ENST00000409141 SIK1P57059 783 aa23.93■■□□□ 1.42
PDLIM2-206ENST00000409141 RBM42Q9BTD8 480 aaKnown RBP23.91■■□□□ 1.42
PDLIM2-206ENST00000409141 SPON1Q9HCB6 807 aa23.91■■□□□ 1.42
PDLIM2-206ENST00000409141 SRCAPQ6ZRS2 3230 aa23.9■■□□□ 1.42
PDLIM2-206ENST00000409141 GNAT3A8MTJ3 354 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms